RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 PTPREP23469 700 aa23.24■■□□□ 1.31
VCPKMT-203ENST00000484763 ERVK-9P63128 1117 aa23.24■■□□□ 1.31
VCPKMT-203ENST00000484763 ERVK-24P63145 666 aa23.24■■□□□ 1.31
VCPKMT-203ENST00000484763 MOXD1Q6UVY6 613 aa23.24■■□□□ 1.31
VCPKMT-203ENST00000484763 FBXO2Q9UK22 296 aaPredicted RBP23.24■■□□□ 1.31
VCPKMT-203ENST00000484763 SRPRBQ9Y5M8 271 aaKnown RBP23.24■■□□□ 1.31
VCPKMT-203ENST00000484763 A0A1W2PQ27 194 aa23.23■■□□□ 1.31
VCPKMT-203ENST00000484763 A0A1W2PQ64 194 aa23.23■■□□□ 1.31
VCPKMT-203ENST00000484763 A0A1W2PQD8 194 aa23.23■■□□□ 1.31
VCPKMT-203ENST00000484763 CUTAO60888 179 aa23.23■■□□□ 1.31
VCPKMT-203ENST00000484763 SREBF2Q12772 1141 aa23.23■■□□□ 1.31
VCPKMT-203ENST00000484763 AXDND1Q5T1B0 1012 aaPredicted RBP23.23■■□□□ 1.31
VCPKMT-203ENST00000484763 ARL6IP4Q66PJ3 421 aaKnown RBP23.23■■□□□ 1.31
VCPKMT-203ENST00000484763 PAXIP1Q6ZW49 1069 aaPredicted RBP23.23■■□□□ 1.31
VCPKMT-203ENST00000484763 NCAPG2Q86XI2 1143 aa23.23■■□□□ 1.31
VCPKMT-203ENST00000484763 C4orf32Q8N8J7 132 aa23.23■■□□□ 1.31
VCPKMT-203ENST00000484763 FERMT2Q96AC1 680 aa23.23■■□□□ 1.31
VCPKMT-203ENST00000484763 A1CFQ9NQ94 594 aaKnown RBP23.23■■□□□ 1.31
VCPKMT-203ENST00000484763 MRVI1Q9Y6F6 885 aa23.23■■□□□ 1.31
VCPKMT-203ENST00000484763 RPTORQ8N122 1335 aa23.23■■□□□ 1.31
VCPKMT-203ENST00000484763 IGF2BP3O00425 579 aaKnown RBP eCLIP23.22■■□□□ 1.31
VCPKMT-203ENST00000484763 CYP3A4P08684 503 aa23.22■■□□□ 1.31
VCPKMT-203ENST00000484763 BAATQ14032 418 aaPredicted RBP23.22■■□□□ 1.31
VCPKMT-203ENST00000484763 CREBZFQ9NS37 354 aa23.22■■□□□ 1.31
VCPKMT-203ENST00000484763 CYP39A1Q9NYL5 469 aa23.22■■□□□ 1.31
VCPKMT-203ENST00000484763 PFASO15067 1338 aa23.22■■□□□ 1.31
VCPKMT-203ENST00000484763 CYP3A7-CYP3A51PA0A087WV96 503 aa23.22■■□□□ 1.31
VCPKMT-203ENST00000484763 ERCC3P19447 782 aa23.22■■□□□ 1.31
VCPKMT-203ENST00000484763 CYP3A7P24462 503 aa23.22■■□□□ 1.31
VCPKMT-203ENST00000484763 APLP1P51693 650 aa23.22■■□□□ 1.31
VCPKMT-203ENST00000484763 POTEDQ86YR6 584 aa23.22■■□□□ 1.31
VCPKMT-203ENST00000484763 GPRC5AQ8NFJ5 357 aa23.22■■□□□ 1.31
VCPKMT-203ENST00000484763 DDX25Q9UHL0 483 aaKnown RBP23.22■■□□□ 1.31
VCPKMT-203ENST00000484763 FRMPD4Q14CM0 1322 aa23.21■■□□□ 1.31
VCPKMT-203ENST00000484763 SLC37A4O43826 429 aa23.21■■□□□ 1.31
VCPKMT-203ENST00000484763 Q3C1V9 767 aa23.21■■□□□ 1.31
VCPKMT-203ENST00000484763 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.21■■□□□ 1.31
VCPKMT-203ENST00000484763 SHCBP1Q8NEM2 672 aa23.21■■□□□ 1.31
VCPKMT-203ENST00000484763 CLIC6Q96NY7 704 aa23.21■■□□□ 1.31
VCPKMT-203ENST00000484763 TMEM60Q9H2L4 133 aa23.21■■□□□ 1.31
VCPKMT-203ENST00000484763 LCTP09848 1927 aa23.21■■□□□ 1.31
VCPKMT-203ENST00000484763 OR52Z1P0C646 297 aa23.2■■□□□ 1.3
VCPKMT-203ENST00000484763 CIITAP33076 1130 aa23.2■■□□□ 1.3
VCPKMT-203ENST00000484763 PRPHP41219 470 aa23.2■■□□□ 1.3
VCPKMT-203ENST00000484763 CCNA1P78396 465 aa23.2■■□□□ 1.3
VCPKMT-203ENST00000484763 CYP4F22Q6NT55 531 aa23.2■■□□□ 1.3
VCPKMT-203ENST00000484763 IFNL1Q8IU54 200 aa23.2■■□□□ 1.3
VCPKMT-203ENST00000484763 CCAR1Q8IX12 1150 aaKnown RBP23.2■■□□□ 1.3
VCPKMT-203ENST00000484763 ANKRD35Q8N283 1001 aa23.2■■□□□ 1.3
VCPKMT-203ENST00000484763 ANKRD13CQ8N6S4 541 aa23.2■■□□□ 1.3
VCPKMT-203ENST00000484763 MRPS27Q92552 414 aaKnown RBP23.2■■□□□ 1.3
VCPKMT-203ENST00000484763 MBOAT7Q96N66 472 aa23.2■■□□□ 1.3
VCPKMT-203ENST00000484763 MROH8Q9H579 483 aa23.2■■□□□ 1.3
VCPKMT-203ENST00000484763 MORF4L1Q9UBU8 362 aa23.2■■□□□ 1.3
VCPKMT-203ENST00000484763 ZNF579Q8NAF0 562 aaKnown RBP23.19■■□□□ 1.3
VCPKMT-203ENST00000484763 TAAR1Q96RJ0 339 aa23.19■■□□□ 1.3
VCPKMT-203ENST00000484763 RASSF10A6NK89 507 aa23.19■■□□□ 1.3
VCPKMT-203ENST00000484763 CMA1P23946 247 aa23.19■■□□□ 1.3
VCPKMT-203ENST00000484763 ZNF76P36508 570 aa23.19■■□□□ 1.3
VCPKMT-203ENST00000484763 UBXN2AP68543 259 aa23.19■■□□□ 1.3
VCPKMT-203ENST00000484763 GRM1Q13255 1194 aa23.19■■□□□ 1.3
VCPKMT-203ENST00000484763 CALCRLQ16602 461 aa23.19■■□□□ 1.3
VCPKMT-203ENST00000484763 FSIP1Q8NA03 581 aa23.19■■□□□ 1.3
VCPKMT-203ENST00000484763 RMDN3Q96TC7 470 aa23.19■■□□□ 1.3
VCPKMT-203ENST00000484763 VWA3AA6NCI4 1184 aa23.18■■□□□ 1.3
VCPKMT-203ENST00000484763 GRIN1Q05586 938 aa23.18■■□□□ 1.3
VCPKMT-203ENST00000484763 TAF1CQ15572 869 aaPredicted RBP23.18■■□□□ 1.3
VCPKMT-203ENST00000484763 FAM110CQ1W6H9 321 aa23.18■■□□□ 1.3
VCPKMT-203ENST00000484763 Q4G0T1 1027 aa23.18■■□□□ 1.3
VCPKMT-203ENST00000484763 PXMP2Q9NR77 195 aa23.18■■□□□ 1.3
VCPKMT-203ENST00000484763 FAM86B1E9PN63 330 aa23.17■■□□□ 1.3
VCPKMT-203ENST00000484763 FAM86B2P0C5J1 330 aa23.17■■□□□ 1.3
VCPKMT-203ENST00000484763 DEFB115Q30KQ5 88 aa23.17■■□□□ 1.3
VCPKMT-203ENST00000484763 ARHGEF16Q5VV41 709 aa23.17■■□□□ 1.3
VCPKMT-203ENST00000484763 SHC4Q6S5L8 630 aa23.17■■□□□ 1.3
VCPKMT-203ENST00000484763 DTHD1Q6ZMT9 781 aa23.17■■□□□ 1.3
VCPKMT-203ENST00000484763 CCDC73Q6ZRK6 1079 aa23.17■■□□□ 1.3
VCPKMT-203ENST00000484763 MTMR9Q96QG7 549 aa23.17■■□□□ 1.3
VCPKMT-203ENST00000484763 CSRNP2Q9H175 543 aa23.17■■□□□ 1.3
VCPKMT-203ENST00000484763 ADGRA2Q96PE1 1338 aa23.17■■□□□ 1.3
VCPKMT-203ENST00000484763 LIG1P18858 919 aa23.17■■□□□ 1.3
VCPKMT-203ENST00000484763 EIF2AK2P19525 551 aaKnown RBP23.17■■□□□ 1.3
VCPKMT-203ENST00000484763 TM4SF4P48230 202 aa23.17■■□□□ 1.3
VCPKMT-203ENST00000484763 NOGQ13253 232 aa23.17■■□□□ 1.3
VCPKMT-203ENST00000484763 PGM5Q15124 567 aa23.17■■□□□ 1.3
VCPKMT-203ENST00000484763 PRR16Q569H4 304 aa23.17■■□□□ 1.3
VCPKMT-203ENST00000484763 RESP18Q5W5W9 173 aa23.17■■□□□ 1.3
VCPKMT-203ENST00000484763 PCNX4Q63HM2 1172 aa23.17■■□□□ 1.3
VCPKMT-203ENST00000484763 GOLPH3LQ9H4A5 285 aa23.17■■□□□ 1.3
VCPKMT-203ENST00000484763 NSUN6Q8TEA1 469 aaKnown RBP23.16■■□□□ 1.3
VCPKMT-203ENST00000484763 PURBQ96QR8 312 aaKnown RBP23.16■■□□□ 1.3
VCPKMT-203ENST00000484763 PDCD2LQ9BRP1 358 aa23.16■■□□□ 1.3
VCPKMT-203ENST00000484763 PORCNQ9H237 461 aa23.16■■□□□ 1.3
VCPKMT-203ENST00000484763 PLXNB2O15031 1838 aa23.15■■□□□ 1.3
VCPKMT-203ENST00000484763 LONP1P36776 959 aaKnown RBP23.15■■□□□ 1.3
VCPKMT-203ENST00000484763 IL17AQ16552 155 aa23.15■■□□□ 1.3
VCPKMT-203ENST00000484763 CEP55Q53EZ4 464 aa23.15■■□□□ 1.3
VCPKMT-203ENST00000484763 WDR78Q5VTH9 848 aa23.15■■□□□ 1.3
VCPKMT-203ENST00000484763 IL31RAQ8NI17 732 aa23.15■■□□□ 1.3
VCPKMT-203ENST00000484763 LENG9Q96B70 501 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms