RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 RGS22Q8NE09 1264 aa7.99□□□□□ -1.13
BRCA1-216ENST00000484087 GMCL1Q96IK5 515 aa7.99□□□□□ -1.13
BRCA1-216ENST00000484087 FGD4Q96M96 766 aa7.99□□□□□ -1.13
BRCA1-216ENST00000484087 ZSCAN10Q96SZ4 725 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-216ENST00000484087 MYL10Q9BUA6 226 aa7.99□□□□□ -1.13
BRCA1-216ENST00000484087 SCAND2PQ9GZW5 306 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-216ENST00000484087 SLC38A10Q9HBR0 1119 aa7.99□□□□□ -1.13
BRCA1-216ENST00000484087 FEM1BQ9UK73 627 aa7.99□□□□□ -1.13
BRCA1-216ENST00000484087 CEP290O15078 2479 aa7.98□□□□□ -1.13
BRCA1-216ENST00000484087 SZT2Q5T011 3432 aa7.98□□□□□ -1.13
BRCA1-216ENST00000484087 GOLGA6L4A6NEF3 574 aa7.98□□□□□ -1.13
BRCA1-216ENST00000484087 GOLGA8AA7E2F4 631 aa7.98□□□□□ -1.13
BRCA1-216ENST00000484087 RBAK-RBAKDNI3L0D1 243 aa7.98□□□□□ -1.13
BRCA1-216ENST00000484087 ZMYND10O75800 440 aa7.98□□□□□ -1.13
BRCA1-216ENST00000484087 FARP2O94887 1054 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-216ENST00000484087 SGPL1O95470 568 aa7.98□□□□□ -1.13
BRCA1-216ENST00000484087 TFRCP02786 760 aaKnown RBP7.98□□□□□ -1.13
BRCA1-216ENST00000484087 ALAS1P13196 640 aa7.98□□□□□ -1.13
BRCA1-216ENST00000484087 RCAN1P53805 252 aa7.98□□□□□ -1.13
BRCA1-216ENST00000484087 UBE2HP62256 183 aa7.98□□□□□ -1.13
BRCA1-216ENST00000484087 CNTN2Q02246 1040 aa7.98□□□□□ -1.13
BRCA1-216ENST00000484087 PPP2R5BQ15173 497 aa7.98□□□□□ -1.13
BRCA1-216ENST00000484087 STAG2Q8N3U4 1231 aa7.98□□□□□ -1.13
BRCA1-216ENST00000484087 MB21D1Q8N884 522 aa7.98□□□□□ -1.13
BRCA1-216ENST00000484087 PNMA1Q8ND90 353 aa7.98□□□□□ -1.13
BRCA1-216ENST00000484087 SHCBP1Q8NEM2 672 aa7.98□□□□□ -1.13
BRCA1-216ENST00000484087 IGDCC4Q8TDY8 1250 aa7.98□□□□□ -1.13
BRCA1-216ENST00000484087 PAWRQ96IZ0 340 aaKnown RBP7.98□□□□□ -1.13
BRCA1-216ENST00000484087 MAML3Q96JK9 1138 aa7.98□□□□□ -1.13
BRCA1-216ENST00000484087 TEX13BQ9BXU2 312 aa7.98□□□□□ -1.13
BRCA1-216ENST00000484087 NCOA5Q9HCD5 579 aaKnown RBP7.98□□□□□ -1.13
BRCA1-216ENST00000484087 HMX1Q9NP08 348 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-216ENST00000484087 RNF146Q9NTX7 359 aa7.98□□□□□ -1.13
BRCA1-216ENST00000484087 ORC3Q9UBD5 711 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-216ENST00000484087 CFAP45Q9UL16 551 aa7.98□□□□□ -1.13
BRCA1-216ENST00000484087 BRPF3Q9ULD4 1205 aa7.98□□□□□ -1.13
BRCA1-216ENST00000484087 CTDP1Q9Y5B0 961 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-216ENST00000484087 ASTN1O14525 1302 aa7.98□□□□□ -1.13
BRCA1-216ENST00000484087 RPTORQ8N122 1335 aa7.98□□□□□ -1.13
BRCA1-216ENST00000484087 NFIBO00712 420 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 FIBPO43427 364 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 ZBED4O75132 1171 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 FCER1AP12319 257 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 XRCC5P13010 732 aaKnown RBP7.97□□□□□ -1.13
BRCA1-216ENST00000484087 CYBAP13498 195 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 RXRAP19793 462 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 DNM1Q05193 864 aaKnown RBP7.97□□□□□ -1.13
BRCA1-216ENST00000484087 ZNF543Q08ER8 600 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 TRIM29Q14134 588 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 KCTD2Q14681 263 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 SEC23AQ15436 765 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 SLC35G1Q2M3R5 365 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 USH1GQ495M9 461 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 SYDE2Q5VT97 1194 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 ATL3Q6DD88 541 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 CAVIN1Q6NZI2 390 aaKnown RBP7.97□□□□□ -1.13
BRCA1-216ENST00000484087 APOA5Q6Q788 366 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 FERMT3Q86UX7 667 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 MICU3Q86XE3 530 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 TRIM22Q8IYM9 498 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 DCAF4Q8WV16 495 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 WASF1Q92558 559 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 C8orf76Q96K31 380 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 MROH8Q9H579 483 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 KAT14Q9H8E8 782 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 LY9Q9HBG7 655 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 TCP11L1Q9NUJ3 509 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 CNPY2Q9Y2B0 182 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 TCHHQ07283 1943 aa7.97□□□□□ -1.13
BRCA1-216ENST00000484087 LAMA2P24043 3122 aaKnown RBP7.97□□□□□ -1.13
BRCA1-216ENST00000484087 ADCY6O43306 1168 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 LETM1O95202 739 aaPredicted RBP7.96□□□□□ -1.13
BRCA1-216ENST00000484087 CTDNEP1O95476 244 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 SLC25A27O95847 323 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 IGHA2P01877 340 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 HOXC6P09630 235 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 CALM1P0DP23 149 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 CALM2P0DP24 149 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 CALM3P0DP25 149 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 SNHG28P0DPA3 235 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 MRE11P49959 708 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 SSRP1Q08945 709 aaKnown RBP7.96□□□□□ -1.13
BRCA1-216ENST00000484087 RTN1Q16799 776 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 ZNF792Q3KQV3 632 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 CCDC178Q5BJE1 867 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 TMEM63BQ5T3F8 832 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 IFIT1BQ5T764 474 aaKnown RBP7.96□□□□□ -1.13
BRCA1-216ENST00000484087 NSMFQ6X4W1 530 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 SLC30A10Q6XR72 485 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 UBE2Q1Q7Z7E8 422 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 CATIPQ7Z7H3 387 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 FAM160B2Q86V87 743 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 ANKRD35Q8N283 1001 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 PIBF1Q8WXW3 757 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 KHSRPQ92945 711 aaKnown RBP eCLIP7.96□□□□□ -1.134e-9■■■□□ 15.2
BRCA1-216ENST00000484087 ZNF396Q96N95 335 aaPredicted RBP7.96□□□□□ -1.13
BRCA1-216ENST00000484087 CRISPLD2Q9H0B8 497 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 RANBP17Q9H2T7 1088 aaKnown RBP7.96□□□□□ -1.13
BRCA1-216ENST00000484087 GDPD2Q9HCC8 539 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 VAT1LQ9HCJ6 419 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms