RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 BAIAP3O94812 1187 aa10.23□□□□□ -0.77
RTFDC1-208ENST00000484084 APPP05067 770 aa10.23□□□□□ -0.77
RTFDC1-208ENST00000484084 ZFYP08048 801 aaPredicted RBP10.23□□□□□ -0.77
RTFDC1-208ENST00000484084 CPT1AP50416 773 aa10.23□□□□□ -0.77
RTFDC1-208ENST00000484084 ERVK-21P61565 698 aa10.23□□□□□ -0.77
RTFDC1-208ENST00000484084 HNRNPUQ00839 825 aaKnown RBP eCLIP10.23□□□□□ -0.77
RTFDC1-208ENST00000484084 CTDSPL2Q05D32 466 aa10.23□□□□□ -0.77
RTFDC1-208ENST00000484084 PTPN11Q06124 597 aaPredicted RBP10.23□□□□□ -0.77
RTFDC1-208ENST00000484084 RBL2Q08999 1139 aa10.23□□□□□ -0.77
RTFDC1-208ENST00000484084 PWP2Q15269 919 aaKnown RBP10.23□□□□□ -0.77
RTFDC1-208ENST00000484084 ZMYM1Q5SVZ6 1142 aa10.23□□□□□ -0.77
RTFDC1-208ENST00000484084 GDF6Q6KF10 455 aaPredicted RBP10.23□□□□□ -0.77
RTFDC1-208ENST00000484084 SESTD1Q86VW0 696 aa10.23□□□□□ -0.77
RTFDC1-208ENST00000484084 FAM178BQ8IXR5 827 aa10.23□□□□□ -0.77
RTFDC1-208ENST00000484084 OR6J1Q8NGC5 347 aa10.23□□□□□ -0.77
RTFDC1-208ENST00000484084 OTUD7AQ8TE49 926 aaPredicted RBP10.23□□□□□ -0.77
RTFDC1-208ENST00000484084 ANKS1AQ92625 1134 aa10.23□□□□□ -0.77
RTFDC1-208ENST00000484084 DCTPP1Q9H773 170 aa10.23□□□□□ -0.77
RTFDC1-208ENST00000484084 ZNF287Q9HBT7 754 aa10.23□□□□□ -0.77
RTFDC1-208ENST00000484084 LMCD1Q9NZU5 365 aa10.23□□□□□ -0.77
RTFDC1-208ENST00000484084 STX8Q9UNK0 236 aa10.23□□□□□ -0.77
RTFDC1-208ENST00000484084 TRIOO75962 3097 aa10.23□□□□□ -0.77
RTFDC1-208ENST00000484084 MUC6Q6W4X9 2439 aa10.22□□□□□ -0.77
RTFDC1-208ENST00000484084 LINC01553A4QN01 128 aa10.22□□□□□ -0.77
RTFDC1-208ENST00000484084 GJB5O95377 273 aa10.22□□□□□ -0.77
RTFDC1-208ENST00000484084 ACTN1P12814 892 aa10.22□□□□□ -0.77
RTFDC1-208ENST00000484084 IL9P15248 144 aa10.22□□□□□ -0.77
RTFDC1-208ENST00000484084 RPS6P62753 249 aaKnown RBP10.22□□□□□ -0.77
RTFDC1-208ENST00000484084 PDE4BQ07343 736 aa10.22□□□□□ -0.77
RTFDC1-208ENST00000484084 COL19A1Q14993 1142 aa10.22□□□□□ -0.77
RTFDC1-208ENST00000484084 TRIM71Q2Q1W2 868 aaKnown RBP10.22□□□□□ -0.77
RTFDC1-208ENST00000484084 LEXMQ3ZCV2 418 aa10.22□□□□□ -0.77
RTFDC1-208ENST00000484084 VPS53Q5VIR6 699 aa10.22□□□□□ -0.77
RTFDC1-208ENST00000484084 ALYREFQ86V81 257 aaKnown RBP10.22□□□□□ -0.77
RTFDC1-208ENST00000484084 ANAPC4Q9UJX5 808 aa10.22□□□□□ -0.77
RTFDC1-208ENST00000484084 ATG2AQ2TAZ0 1938 aa10.22□□□□□ -0.77
RTFDC1-208ENST00000484084 POTEB3A0JP26 581 aa10.21□□□□□ -0.77
RTFDC1-208ENST00000484084 PRR33A8MZF0 331 aa10.21□□□□□ -0.77
RTFDC1-208ENST00000484084 ARHGAP1Q07960 439 aa10.21□□□□□ -0.77
RTFDC1-208ENST00000484084 IKQ13123 557 aaPredicted RBP10.21□□□□□ -0.77
RTFDC1-208ENST00000484084 PTGISQ16647 500 aa10.21□□□□□ -0.77
RTFDC1-208ENST00000484084 FAM47CQ5HY64 1035 aa10.21□□□□□ -0.77
RTFDC1-208ENST00000484084 POTEBQ6S5H4 581 aa10.21□□□□□ -0.77
RTFDC1-208ENST00000484084 NEK9Q8TD19 979 aa10.21□□□□□ -0.77
RTFDC1-208ENST00000484084 DCAF4Q8WV16 495 aa10.21□□□□□ -0.77
RTFDC1-208ENST00000484084 TBC1D5Q92609 795 aa10.21□□□□□ -0.77
RTFDC1-208ENST00000484084 TMEM47Q9BQJ4 181 aa10.21□□□□□ -0.77
RTFDC1-208ENST00000484084 OSBPL7Q9BZF2 842 aa10.21□□□□□ -0.77
RTFDC1-208ENST00000484084 FTOQ9C0B1 505 aaKnown RBP eCLIP10.21□□□□□ -0.77
RTFDC1-208ENST00000484084 UBE2ZQ9H832 354 aaPredicted RBP10.21□□□□□ -0.77
RTFDC1-208ENST00000484084 COL20A1Q9P218 1284 aa10.21□□□□□ -0.77
RTFDC1-208ENST00000484084 ADD3Q9UEY8 706 aaKnown RBP10.21□□□□□ -0.77
RTFDC1-208ENST00000484084 FRMPD2Q68DX3 1309 aaPredicted RBP10.21□□□□□ -0.78
RTFDC1-208ENST00000484084 PIEZO1Q92508 2521 aa10.21□□□□□ -0.78
RTFDC1-208ENST00000484084 PTPDC1A2A3K4 754 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 GRXCR2A6NFK2 248 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 NKRFO15226 690 aaKnown RBP eCLIP10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 ORC4O43929 436 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 KPNA6O60684 536 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 MMP3P08254 477 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 SNHG28P0DPA3 235 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 TXNP10599 105 aaKnown RBP10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 PDHBP11177 359 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 CKBP12277 381 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 SELPP16109 830 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 CALML3P27482 149 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 BFSP2Q13515 415 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 PPP2R5BQ15173 497 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 LRRFIP1Q32MZ4 808 aaKnown RBP10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 KIAA1217Q5T5P2 1943 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 SYDE2Q5VT97 1194 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 RNF207Q6ZRF8 634 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 LRRC8DQ7L1W4 858 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 GJD3Q8N144 294 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 RETREG2Q8NC44 543 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 AFAP1L1Q8TED9 768 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 SCFD2Q8WU76 684 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 AFG1LQ8WV93 481 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 C17orf80Q9BSJ5 609 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 SALL3Q9BXA9 1300 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 NAPBQ9H115 298 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 MTUS1Q9ULD2 1270 aa10.2□□□□□ -0.78
RTFDC1-208ENST00000484084 TSPY2A6NKD2 308 aa10.19□□□□□ -0.78
RTFDC1-208ENST00000484084 KIF28PB7ZC32 967 aa10.19□□□□□ -0.78
RTFDC1-208ENST00000484084 HAS3O00219 553 aa10.19□□□□□ -0.78
RTFDC1-208ENST00000484084 KCNA5P22460 613 aa10.19□□□□□ -0.78
RTFDC1-208ENST00000484084 HTRA4P83105 476 aaPredicted RBP10.19□□□□□ -0.78
RTFDC1-208ENST00000484084 ZNF200P98182 395 aaPredicted RBP10.19□□□□□ -0.78
RTFDC1-208ENST00000484084 LY6KQ17RY6 165 aa10.19□□□□□ -0.78
RTFDC1-208ENST00000484084 CNKSR3Q6P9H4 555 aa10.19□□□□□ -0.78
RTFDC1-208ENST00000484084 DNERQ8NFT8 737 aa10.19□□□□□ -0.78
RTFDC1-208ENST00000484084 CAGE1Q8TC20 777 aa10.19□□□□□ -0.78
RTFDC1-208ENST00000484084 SP7Q8TDD2 431 aaPredicted RBP10.19□□□□□ -0.78
RTFDC1-208ENST00000484084 RAD9AQ99638 391 aa10.19□□□□□ -0.78
RTFDC1-208ENST00000484084 NACAP1Q9BZK3 213 aa10.19□□□□□ -0.78
RTFDC1-208ENST00000484084 CPVLQ9H3G5 476 aa10.19□□□□□ -0.78
RTFDC1-208ENST00000484084 GPCPD1Q9NPB8 672 aa10.19□□□□□ -0.78
RTFDC1-208ENST00000484084 GPHNQ9NQX3 736 aaPredicted RBP10.19□□□□□ -0.78
RTFDC1-208ENST00000484084 HDAC6Q9UBN7 1215 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms