RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 CCDC70Q6NSX1 233 aa13.76□□□□□ -0.21
CCDC78-213ENST00000482878 CSGALNACT2Q8N6G5 542 aa13.76□□□□□ -0.21
CCDC78-213ENST00000482878 MARCH10Q8NA82 808 aaPredicted RBP13.76□□□□□ -0.21
CCDC78-213ENST00000482878 NHEJ1Q9H9Q4 299 aaPredicted RBP13.76□□□□□ -0.21
CCDC78-213ENST00000482878 F8W031 263 aaPredicted RBP13.76□□□□□ -0.21
CCDC78-213ENST00000482878 PDE2AO00408 941 aaPredicted RBP13.76□□□□□ -0.21
CCDC78-213ENST00000482878 TFAP4Q01664 338 aa13.76□□□□□ -0.21
CCDC78-213ENST00000482878 ATP8A2Q9NTI2 1148 aa13.76□□□□□ -0.21
CCDC78-213ENST00000482878 EXOC1Q9NV70 894 aa13.76□□□□□ -0.21
CCDC78-213ENST00000482878 ZNF652Q9Y2D9 606 aa13.76□□□□□ -0.21
CCDC78-213ENST00000482878 MEFVO15553 781 aaPredicted RBP13.76□□□□□ -0.21
CCDC78-213ENST00000482878 KRT86O43790 486 aa13.76□□□□□ -0.21
CCDC78-213ENST00000482878 CYP27A1Q02318 531 aa13.76□□□□□ -0.21
CCDC78-213ENST00000482878 CCDC40Q4G0X9 1142 aa13.76□□□□□ -0.21
CCDC78-213ENST00000482878 KCTD16Q68DU8 428 aa13.76□□□□□ -0.21
CCDC78-213ENST00000482878 PNMA1Q8ND90 353 aa13.76□□□□□ -0.21
CCDC78-213ENST00000482878 SETDB2Q96T68 719 aa13.76□□□□□ -0.21
CCDC78-213ENST00000482878 TACO1Q9BSH4 297 aaKnown RBP13.76□□□□□ -0.21
CCDC78-213ENST00000482878 SH3GLB2Q9NR46 395 aa13.76□□□□□ -0.21
CCDC78-213ENST00000482878 MCM9Q9NXL9 1143 aa13.76□□□□□ -0.21
CCDC78-213ENST00000482878 ARPP21Q9UBL0 812 aaPredicted RBP13.76□□□□□ -0.21
CCDC78-213ENST00000482878 C21orf2O43822 256 aa13.75□□□□□ -0.21
CCDC78-213ENST00000482878 MYBL2P10244 700 aa13.75□□□□□ -0.21
CCDC78-213ENST00000482878 TBC1D8BQ0IIM8 1120 aa13.75□□□□□ -0.21
CCDC78-213ENST00000482878 CCSER1Q9C0I3 900 aa13.75□□□□□ -0.21
CCDC78-213ENST00000482878 ZC3H4Q9UPT8 1303 aaKnown RBP13.75□□□□□ -0.21
CCDC78-213ENST00000482878 G3V3G9 751 aa13.75□□□□□ -0.21
CCDC78-213ENST00000482878 CYTH3O43739 400 aa13.75□□□□□ -0.21
CCDC78-213ENST00000482878 SF3B3Q15393 1217 aaKnown RBP13.75□□□□□ -0.21
CCDC78-213ENST00000482878 SBK1Q52WX2 424 aa13.75□□□□□ -0.21
CCDC78-213ENST00000482878 DCAF8Q5TAQ9 597 aa13.75□□□□□ -0.21
CCDC78-213ENST00000482878 ANKRD40Q6AI12 368 aa13.75□□□□□ -0.21
CCDC78-213ENST00000482878 ZNF662Q6ZS27 426 aa13.75□□□□□ -0.21
CCDC78-213ENST00000482878 DYNLL2Q96FJ2 89 aa13.75□□□□□ -0.21
CCDC78-213ENST00000482878 MAD2L2Q9UI95 211 aa13.75□□□□□ -0.21
CCDC78-213ENST00000482878 MACROD2A1Z1Q3 448 aa13.74□□□□□ -0.21
CCDC78-213ENST00000482878 STK4Q13043 487 aa13.74□□□□□ -0.21
CCDC78-213ENST00000482878 IFT88Q13099 833 aa13.74□□□□□ -0.21
CCDC78-213ENST00000482878 PREPLQ4J6C6 727 aaPredicted RBP13.74□□□□□ -0.21
CCDC78-213ENST00000482878 HEATR3Q7Z4Q2 680 aa13.74□□□□□ -0.21
CCDC78-213ENST00000482878 SHOX2O60902 331 aaPredicted RBP13.74□□□□□ -0.21
CCDC78-213ENST00000482878 PLCG1P19174 1290 aa13.74□□□□□ -0.21
CCDC78-213ENST00000482878 CYLC1P35663 651 aaPredicted RBP13.74□□□□□ -0.21
CCDC78-213ENST00000482878 MATR3P43243 847 aaKnown RBP eCLIP13.74□□□□□ -0.21
CCDC78-213ENST00000482878 MRPS25P82663 173 aaKnown RBP13.74□□□□□ -0.21
CCDC78-213ENST00000482878 DHTKD1Q96HY7 919 aaPredicted RBP13.74□□□□□ -0.21
CCDC78-213ENST00000482878 FAXDC2Q96IV6 333 aa13.74□□□□□ -0.21
CCDC78-213ENST00000482878 CNOT6LQ96LI5 555 aaKnown RBP13.74□□□□□ -0.21
CCDC78-213ENST00000482878 DLEC1Q9Y238 1755 aa13.74□□□□□ -0.21
CCDC78-213ENST00000482878 USP17L3A6NCW0 530 aa13.74□□□□□ -0.21
CCDC78-213ENST00000482878 USP17L4A6NCW7 530 aa13.74□□□□□ -0.21
CCDC78-213ENST00000482878 ZNF263O14978 683 aa13.74□□□□□ -0.21
CCDC78-213ENST00000482878 MYL1P05976 194 aa13.74□□□□□ -0.21
CCDC78-213ENST00000482878 FCER1AP12319 257 aa13.74□□□□□ -0.21
CCDC78-213ENST00000482878 SF3B2Q13435 895 aaKnown RBP13.74□□□□□ -0.21
CCDC78-213ENST00000482878 USP17L1Q7RTZ2 530 aa13.74□□□□□ -0.21
CCDC78-213ENST00000482878 P2RX5Q93086 422 aa13.74□□□□□ -0.21
CCDC78-213ENST00000482878 PCMTD1Q96MG8 357 aaPredicted RBP13.74□□□□□ -0.21
CCDC78-213ENST00000482878 ZNHIT6Q9NWK9 470 aaKnown RBP13.74□□□□□ -0.21
CCDC78-213ENST00000482878 FLT1P17948 1338 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 PPP1R12BO60237 982 aaPredicted RBP13.73□□□□□ -0.21
CCDC78-213ENST00000482878 RFC4P35249 363 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 ZBED6P86452 979 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 PDE4DQ08499 809 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 SNCBQ16143 134 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 CCDC178Q5BJE1 867 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 MIIPQ5JXC2 388 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 KRT26Q7Z3Y9 468 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 EHBP1Q8NDI1 1231 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 A1CFQ9NQ94 594 aaKnown RBP13.73□□□□□ -0.21
CCDC78-213ENST00000482878 PHLPP1O60346 1717 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 TARSL2A2RTX5 802 aaKnown RBP13.73□□□□□ -0.21
CCDC78-213ENST00000482878 OPA1O60313 960 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 PLEKP08567 350 aaPredicted RBP13.73□□□□□ -0.21
CCDC78-213ENST00000482878 IDEP14735 1019 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 CCNE1P24864 410 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 TXNRD1Q16881 649 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 DGKHQ86XP1 1220 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 SMCR8Q8TEV9 937 aaPredicted RBP13.73□□□□□ -0.21
CCDC78-213ENST00000482878 NOC3LQ8WTT2 800 aaKnown RBP13.73□□□□□ -0.21
CCDC78-213ENST00000482878 TBC1D22AQ8WUA7 517 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 HPS3Q969F9 1004 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 NLRP3Q96P20 1036 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 PURBQ96QR8 312 aaKnown RBP13.73□□□□□ -0.21
CCDC78-213ENST00000482878 TRIM9Q9C026 710 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 JADE2Q9NQC1 790 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 STXBP3O00186 592 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 ERCC3P19447 782 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 HIBADHP31937 336 aaKnown RBP13.73□□□□□ -0.21
CCDC78-213ENST00000482878 CKAP4Q07065 602 aaKnown RBP13.73□□□□□ -0.21
CCDC78-213ENST00000482878 DDR1Q08345 913 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 C2orf54Q08AI8 447 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 GRM4Q14833 912 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 AP1ARQ63HQ0 302 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 CABP7Q86V35 215 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 CCDC170Q8IYT3 715 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 SH2D3CQ8N5H7 860 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 NUP58Q9BVL2 599 aa13.73□□□□□ -0.21
CCDC78-213ENST00000482878 COL22A1Q8NFW1 1626 aaPredicted RBP13.72□□□□□ -0.21
CCDC78-213ENST00000482878 GOLGA6L7A0A1B0GV03 622 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms