RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 CALM1P0DP23 149 aa23.06■■□□□ 1.28
MSH5-215ENST00000482280 CALM2P0DP24 149 aa23.06■■□□□ 1.28
MSH5-215ENST00000482280 CALM3P0DP25 149 aa23.06■■□□□ 1.28
MSH5-215ENST00000482280 GNAQP50148 359 aa23.06■■□□□ 1.28
MSH5-215ENST00000482280 TROAPQ12815 778 aa23.06■■□□□ 1.28
MSH5-215ENST00000482280 SYNE3Q6ZMZ3 975 aa23.06■■□□□ 1.28
MSH5-215ENST00000482280 SEPT14Q6ZU15 432 aa23.06■■□□□ 1.28
MSH5-215ENST00000482280 ZNF654Q8IZM8 581 aa23.06■■□□□ 1.28
MSH5-215ENST00000482280 TBC1D5Q92609 795 aa23.06■■□□□ 1.28
MSH5-215ENST00000482280 PIGSQ96S52 555 aa23.06■■□□□ 1.28
MSH5-215ENST00000482280 LZTS2Q9BRK4 669 aa23.06■■□□□ 1.28
MSH5-215ENST00000482280 RIOX1Q9H6W3 641 aa23.06■■□□□ 1.28
MSH5-215ENST00000482280 LRRC37A2A6NM11 1700 aa23.05■■□□□ 1.28
MSH5-215ENST00000482280 PNMA6FA0A0J9YX94 578 aa23.05■■□□□ 1.28
MSH5-215ENST00000482280 KPNA6O60684 536 aa23.05■■□□□ 1.28
MSH5-215ENST00000482280 TIMP1P01033 207 aa23.05■■□□□ 1.28
MSH5-215ENST00000482280 EIF2AK2P19525 551 aaKnown RBP23.05■■□□□ 1.28
MSH5-215ENST00000482280 CDK7P50613 346 aa23.05■■□□□ 1.28
MSH5-215ENST00000482280 ANTXR2P58335 489 aa23.05■■□□□ 1.28
MSH5-215ENST00000482280 MTMR8Q96EF0 704 aa23.05■■□□□ 1.28
MSH5-215ENST00000482280 RRP36Q96EU6 259 aaKnown RBP23.05■■□□□ 1.28
MSH5-215ENST00000482280 MAP3K14Q99558 947 aa23.05■■□□□ 1.28
MSH5-215ENST00000482280 LY9Q9HBG7 655 aa23.05■■□□□ 1.28
MSH5-215ENST00000482280 SENP2Q9HC62 589 aa23.05■■□□□ 1.28
MSH5-215ENST00000482280 GCOM1H8Y6P7 765 aaPredicted RBP23.04■■□□□ 1.28
MSH5-215ENST00000482280 POLR2MP0CAP2 368 aa23.04■■□□□ 1.28
MSH5-215ENST00000482280 NECTIN1Q15223 517 aa23.04■■□□□ 1.28
MSH5-215ENST00000482280 SKAP1Q86WV1 359 aa23.04■■□□□ 1.28
MSH5-215ENST00000482280 FAM126BQ8IXS8 530 aa23.04■■□□□ 1.28
MSH5-215ENST00000482280 TMEM199Q8N511 208 aa23.04■■□□□ 1.28
MSH5-215ENST00000482280 PIBF1Q8WXW3 757 aa23.04■■□□□ 1.28
MSH5-215ENST00000482280 SLC12A7Q9Y666 1083 aa23.04■■□□□ 1.28
MSH5-215ENST00000482280 EIF3JO75822 258 aaKnown RBP23.03■■□□□ 1.28
MSH5-215ENST00000482280 PTGS1P23219 599 aa23.03■■□□□ 1.28
MSH5-215ENST00000482280 HSD17B4P51659 736 aa23.03■■□□□ 1.28
MSH5-215ENST00000482280 SHHQ15465 462 aa23.03■■□□□ 1.28
MSH5-215ENST00000482280 TMEM63BQ5T3F8 832 aa23.03■■□□□ 1.28
MSH5-215ENST00000482280 MTG1Q9BT17 334 aaPredicted RBP23.03■■□□□ 1.28
MSH5-215ENST00000482280 PXMP2Q9NR77 195 aa23.03■■□□□ 1.28
MSH5-215ENST00000482280 COL20A1Q9P218 1284 aa23.03■■□□□ 1.28
MSH5-215ENST00000482280 PPIGQ13427 754 aaKnown RBP eCLIP23.02■■□□□ 1.282e-7■■■■□ 22.3
MSH5-215ENST00000482280 DEFB123Q8N688 67 aa23.02■■□□□ 1.28
MSH5-215ENST00000482280 CUL5Q93034 780 aa23.02■■□□□ 1.28
MSH5-215ENST00000482280 RNPC3Q96LT9 517 aaKnown RBP23.02■■□□□ 1.28
MSH5-215ENST00000482280 MYL10Q9BUA6 226 aa23.02■■□□□ 1.28
MSH5-215ENST00000482280 PPP1R12CQ9BZL4 782 aa23.02■■□□□ 1.28
MSH5-215ENST00000482280 TBX21Q9UL17 535 aa23.02■■□□□ 1.28
MSH5-215ENST00000482280 MRVI1Q9Y6F6 885 aa23.02■■□□□ 1.28
MSH5-215ENST00000482280 LCTP09848 1927 aa23.02■■□□□ 1.28
MSH5-215ENST00000482280 LTBP2Q14767 1821 aa23.01■■□□□ 1.27
MSH5-215ENST00000482280 SH2B2O14492 632 aaPredicted RBP23.01■■□□□ 1.27
MSH5-215ENST00000482280 PPP1R11O60927 126 aaPredicted RBP23.01■■□□□ 1.27
MSH5-215ENST00000482280 GH1P01241 217 aa23.01■■□□□ 1.27
MSH5-215ENST00000482280 NR3C2P08235 984 aa23.01■■□□□ 1.27
MSH5-215ENST00000482280 SUPT20HL2P0C7V6 817 aa23.01■■□□□ 1.27
MSH5-215ENST00000482280 MYCLP12524 364 aaPredicted RBP23.01■■□□□ 1.27
MSH5-215ENST00000482280 HOXA13P31271 388 aaPredicted RBP23.01■■□□□ 1.27
MSH5-215ENST00000482280 LIFRP42702 1097 aa23.01■■□□□ 1.27
MSH5-215ENST00000482280 PSMC6P62333 389 aa23.01■■□□□ 1.27
MSH5-215ENST00000482280 KRT32Q14532 448 aa23.01■■□□□ 1.27
MSH5-215ENST00000482280 FAM47CQ5HY64 1035 aa23.01■■□□□ 1.27
MSH5-215ENST00000482280 MFSD5Q6N075 450 aa23.01■■□□□ 1.27
MSH5-215ENST00000482280 NEK1Q96PY6 1258 aa23.01■■□□□ 1.27
MSH5-215ENST00000482280 SPZ1Q9BXG8 430 aa23.01■■□□□ 1.27
MSH5-215ENST00000482280 ITGB8P26012 769 aa23■■□□□ 1.27
MSH5-215ENST00000482280 SMARCA1P28370 1054 aa23■■□□□ 1.27
MSH5-215ENST00000482280 CHMP4BP1P59074 171 aa23■■□□□ 1.27
MSH5-215ENST00000482280 FGD1P98174 961 aa23■■□□□ 1.27
MSH5-215ENST00000482280 PURAQ00577 322 aaKnown RBP23■■□□□ 1.27
MSH5-215ENST00000482280 KCNV1Q6PIU1 500 aa23■■□□□ 1.27
MSH5-215ENST00000482280 FCHSD1Q86WN1 690 aa23■■□□□ 1.27
MSH5-215ENST00000482280 SLC43A3Q8NBI5 491 aa23■■□□□ 1.27
MSH5-215ENST00000482280 HIPK3Q9H422 1215 aa23■■□□□ 1.27
MSH5-215ENST00000482280 CYTH3O43739 400 aa22.99■■□□□ 1.27
MSH5-215ENST00000482280 CCND2P30279 289 aa22.99■■□□□ 1.27
MSH5-215ENST00000482280 C9orf50Q5SZB4 431 aa22.99■■□□□ 1.27
MSH5-215ENST00000482280 COPS5Q92905 334 aa22.99■■□□□ 1.27
MSH5-215ENST00000482280 MYH6P13533 1939 aa22.99■■□□□ 1.27
MSH5-215ENST00000482280 DNAH12Q6ZR08 3092 aa22.98■■□□□ 1.27
MSH5-215ENST00000482280 A6NJR5 290 aa22.98■■□□□ 1.27
MSH5-215ENST00000482280 CD4P01730 458 aa22.98■■□□□ 1.27
MSH5-215ENST00000482280 GHRHRQ02643 423 aa22.98■■□□□ 1.27
MSH5-215ENST00000482280 LY6KQ17RY6 165 aa22.98■■□□□ 1.27
MSH5-215ENST00000482280 SMARCC2Q8TAQ2 1214 aa22.98■■□□□ 1.27
MSH5-215ENST00000482280 PDCD2LQ9BRP1 358 aa22.98■■□□□ 1.27
MSH5-215ENST00000482280 NOD1Q9Y239 953 aa22.98■■□□□ 1.27
MSH5-215ENST00000482280 OPLAHO14841 1288 aa22.97■■□□□ 1.27
MSH5-215ENST00000482280 ARIH2O95376 493 aa22.97■■□□□ 1.27
MSH5-215ENST00000482280 HMGB1P09429 215 aaKnown RBP22.97■■□□□ 1.27
MSH5-215ENST00000482280 CASTP20810 708 aaKnown RBP22.97■■□□□ 1.27
MSH5-215ENST00000482280 ZNF697Q5TEC3 545 aa22.97■■□□□ 1.27
MSH5-215ENST00000482280 CCDC62Q6P9F0 684 aa22.97■■□□□ 1.27
MSH5-215ENST00000482280 DHX37Q8IY37 1157 aaKnown RBP22.97■■□□□ 1.27
MSH5-215ENST00000482280 AFG1LQ8WV93 481 aa22.97■■□□□ 1.27
MSH5-215ENST00000482280 LRRC2Q9BYS8 371 aa22.97■■□□□ 1.27
MSH5-215ENST00000482280 TRPV6Q9H1D0 765 aa22.97■■□□□ 1.27
MSH5-215ENST00000482280 ALDH8A1Q9H2A2 487 aaPredicted RBP22.97■■□□□ 1.27
MSH5-215ENST00000482280 MTIF3Q9H2K0 278 aaKnown RBP22.97■■□□□ 1.27
MSH5-215ENST00000482280 RANBP2P49792 3224 aaKnown RBP22.97■■□□□ 1.27
MSH5-215ENST00000482280 B4GALT4O60513 344 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 297.8 ms