RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	RNF34	Q969K3	372 aa		5.67	□□□□□ -1.5
CCNL1-223	ENST00000481173	FGD4	Q96M96	766 aa		5.67	□□□□□ -1.5
CCNL1-223	ENST00000481173	HAUS7	Q99871	368 aa		5.67	□□□□□ -1.5
CCNL1-223	ENST00000481173	C1QTNF3	Q9BXJ4	246 aa		5.67	□□□□□ -1.5
CCNL1-223	ENST00000481173	WHRN	Q9P202	907 aa		5.67	□□□□□ -1.5
CCNL1-223	ENST00000481173	BACE2	Q9Y5Z0	518 aa		5.67	□□□□□ -1.5
CCNL1-223	ENST00000481173	ZBTB7A	O95365	584 aa		5.66	□□□□□ -1.5
CCNL1-223	ENST00000481173	FUCA1	P04066	466 aa		5.66	□□□□□ -1.5
CCNL1-223	ENST00000481173	THBS2	P35442	1172 aa		5.66	□□□□□ -1.5
CCNL1-223	ENST00000481173	ZNF394	Q53GI3	561 aa		5.66	□□□□□ -1.5
CCNL1-223	ENST00000481173	MCTP2	Q6DN12	878 aa		5.66	□□□□□ -1.5
CCNL1-223	ENST00000481173	LIMS2	Q7Z4I7	341 aa		5.66	□□□□□ -1.5
CCNL1-223	ENST00000481173	ADAT2	Q7Z6V5	191 aa	Known RBP	5.66	□□□□□ -1.5
CCNL1-223	ENST00000481173	FAM26E	Q8N5C1	309 aa		5.66	□□□□□ -1.5
CCNL1-223	ENST00000481173	TTC9B	Q8N6N2	239 aa		5.66	□□□□□ -1.5
CCNL1-223	ENST00000481173	C11orf84	Q9BUA3	381 aa	Predicted RBP	5.66	□□□□□ -1.5
CCNL1-223	ENST00000481173	KLHL25	Q9H0H3	589 aa		5.66	□□□□□ -1.5
CCNL1-223	ENST00000481173	PCDHB10	Q9UN67	800 aa		5.66	□□□□□ -1.5
CCNL1-223	ENST00000481173	PCDHGB7	Q9Y5F8	929 aa		5.66	□□□□□ -1.5
CCNL1-223	ENST00000481173	ZNF536	O15090	1300 aa		5.66	□□□□□ -1.5
CCNL1-223	ENST00000481173	C2orf71	A6NGG8	1288 aa		5.65	□□□□□ -1.5
CCNL1-223	ENST00000481173	RPL13	P26373	211 aa	Known RBP	5.65	□□□□□ -1.5
CCNL1-223	ENST00000481173	GNPTAB	Q3T906	1256 aa		5.65	□□□□□ -1.5
CCNL1-223	ENST00000481173	HEATR6	Q6AI08	1181 aa	Known RBP	5.65	□□□□□ -1.5
CCNL1-223	ENST00000481173	CCDC81	Q6ZN84	652 aa		5.65	□□□□□ -1.5
CCNL1-223	ENST00000481173	SPRED1	Q7Z699	444 aa		5.65	□□□□□ -1.5
CCNL1-223	ENST00000481173	LGI4	Q8N135	537 aa		5.65	□□□□□ -1.5
CCNL1-223	ENST00000481173	RBBP8NL	Q8NC74	664 aa	Predicted RBP	5.65	□□□□□ -1.5
CCNL1-223	ENST00000481173	SSBP3	Q9BWW4	388 aa	Predicted RBP	5.65	□□□□□ -1.5
CCNL1-223	ENST00000481173	NPHP3-ACAD11	A0A0J9YXS1	232 aa		5.64	□□□□□ -1.51
CCNL1-223	ENST00000481173	C7orf72	A4D263	438 aa		5.64	□□□□□ -1.51
CCNL1-223	ENST00000481173	MROH6	A6NGR9	719 aa		5.64	□□□□□ -1.51
CCNL1-223	ENST00000481173	EPHX1	P07099	455 aa		5.64	□□□□□ -1.51
CCNL1-223	ENST00000481173	C6	P13671	934 aa		5.64	□□□□□ -1.51
CCNL1-223	ENST00000481173	PAM	P19021	973 aa		5.64	□□□□□ -1.51
CCNL1-223	ENST00000481173	FANCC	Q00597	558 aa		5.64	□□□□□ -1.51
CCNL1-223	ENST00000481173	AMPD2	Q01433	879 aa		5.64	□□□□□ -1.51
CCNL1-223	ENST00000481173	KIAA2012	Q0VF49	1180 aa		5.64	□□□□□ -1.51
CCNL1-223	ENST00000481173	C9orf131	Q5VYM1	1079 aa		5.64	□□□□□ -1.51
CCNL1-223	ENST00000481173	CD300LD	Q6UXZ3	194 aa		5.64	□□□□□ -1.51
CCNL1-223	ENST00000481173	ETV3L	Q6ZN32	361 aa		5.64	□□□□□ -1.51
CCNL1-223	ENST00000481173	KY	Q8NBH2	561 aa		5.64	□□□□□ -1.51
CCNL1-223	ENST00000481173	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	5.64	□□□□□ -1.51
CCNL1-223	ENST00000481173	DVL3	Q92997	716 aa	Predicted RBP	5.64	□□□□□ -1.51
CCNL1-223	ENST00000481173	SORCS2	Q96PQ0	1159 aa		5.64	□□□□□ -1.51
CCNL1-223	ENST00000481173	GBP3	Q9H0R5	595 aa		5.64	□□□□□ -1.51
CCNL1-223	ENST00000481173	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	5.64	□□□□□ -1.51
CCNL1-223	ENST00000481173	CGGBP1	Q9UFW8	167 aa	Predicted RBP	5.64	□□□□□ -1.51
CCNL1-223	ENST00000481173	NPHS1	O60500	1241 aa		5.63	□□□□□ -1.51
CCNL1-223	ENST00000481173	MBLAC2	Q68D91	279 aa		5.63	□□□□□ -1.51
CCNL1-223	ENST00000481173	BORA	Q6PGQ7	559 aa		5.63	□□□□□ -1.51
CCNL1-223	ENST00000481173	GLB1L	Q6UWU2	654 aa		5.63	□□□□□ -1.51
CCNL1-223	ENST00000481173	MARCH2	Q9P0N8	246 aa		5.63	□□□□□ -1.51
CCNL1-223	ENST00000481173	DDX3X	O00571	662 aa	Known RBP eCLIP	5.62	□□□□□ -1.51
CCNL1-223	ENST00000481173	PPM1B	O75688	479 aa		5.62	□□□□□ -1.51
CCNL1-223	ENST00000481173	TACR2	P21452	398 aa		5.62	□□□□□ -1.51
CCNL1-223	ENST00000481173	HMGA2	P52926	109 aa		5.62	□□□□□ -1.51
CCNL1-223	ENST00000481173	RACK1	P63244	317 aa	Known RBP	5.62	□□□□□ -1.51
CCNL1-223	ENST00000481173	FAM26F	Q5R3K3	315 aa		5.62	□□□□□ -1.51
CCNL1-223	ENST00000481173	FAM124A	Q86V42	546 aa		5.62	□□□□□ -1.51
CCNL1-223	ENST00000481173	DCP2	Q8IU60	420 aa	Known RBP	5.62	□□□□□ -1.51
CCNL1-223	ENST00000481173		Q8N1X5	172 aa		5.62	□□□□□ -1.51
CCNL1-223	ENST00000481173	TXNDC5	Q8NBS9	432 aa	Known RBP	5.62	□□□□□ -1.51
CCNL1-223	ENST00000481173	BTG4	Q9NY30	223 aa		5.62	□□□□□ -1.51
CCNL1-223	ENST00000481173	CLEC1B	Q9P126	229 aa		5.62	□□□□□ -1.51
CCNL1-223	ENST00000481173	SUGT1	Q9Y2Z0	365 aa		5.62	□□□□□ -1.51
CCNL1-223	ENST00000481173	OVOL3	O00110	214 aa		5.61	□□□□□ -1.51
CCNL1-223	ENST00000481173	SGSM2	O43147	1006 aa		5.61	□□□□□ -1.51
CCNL1-223	ENST00000481173	SLPI	P03973	132 aa		5.61	□□□□□ -1.51
CCNL1-223	ENST00000481173	STAT5A	P42229	794 aa		5.61	□□□□□ -1.51
CCNL1-223	ENST00000481173	ITGA1	P56199	1179 aa		5.61	□□□□□ -1.51
CCNL1-223	ENST00000481173	SLC7A5	Q01650	507 aa		5.61	□□□□□ -1.51
CCNL1-223	ENST00000481173	CDSN	Q15517	529 aa		5.61	□□□□□ -1.51
CCNL1-223	ENST00000481173	ZFPM1	Q8IX07	1006 aa		5.61	□□□□□ -1.51
CCNL1-223	ENST00000481173	HOMEZ	Q8IX15	550 aa		5.61	□□□□□ -1.51
CCNL1-223	ENST00000481173	ARHGEF39	Q8N4T4	335 aa		5.61	□□□□□ -1.51
CCNL1-223	ENST00000481173	PLEKHO2	Q8TD55	490 aa		5.61	□□□□□ -1.51
CCNL1-223	ENST00000481173	DPF3	Q92784	378 aa		5.61	□□□□□ -1.51
CCNL1-223	ENST00000481173	KRTAP9-8	Q9BYQ0	159 aa		5.61	□□□□□ -1.51
CCNL1-223	ENST00000481173	AP5M1	Q9H0R1	490 aa		5.61	□□□□□ -1.51
CCNL1-223	ENST00000481173	PLS3	P13797	630 aa		5.6	□□□□□ -1.51
CCNL1-223	ENST00000481173	GDF5	P43026	501 aa		5.6	□□□□□ -1.51
CCNL1-223	ENST00000481173	GRB10	Q13322	594 aa		5.6	□□□□□ -1.51
CCNL1-223	ENST00000481173	ICAM4	Q14773	271 aa		5.6	□□□□□ -1.51
CCNL1-223	ENST00000481173	PRR31	Q5SQ13	230 aa		5.6	□□□□□ -1.51
CCNL1-223	ENST00000481173	MIB1	Q86YT6	1006 aa		5.6	□□□□□ -1.51
CCNL1-223	ENST00000481173	TEX2	Q8IWB9	1127 aa		5.6	□□□□□ -1.51
CCNL1-223	ENST00000481173	TTLL6	Q8N841	843 aa		5.6	□□□□□ -1.51
CCNL1-223	ENST00000481173	KISS1R	Q969F8	398 aa	Predicted RBP	5.6	□□□□□ -1.51
CCNL1-223	ENST00000481173	CRBN	Q96SW2	442 aa		5.6	□□□□□ -1.51
CCNL1-223	ENST00000481173	MRI	Q9BWK5	157 aa		5.6	□□□□□ -1.51
CCNL1-223	ENST00000481173	GPRC5C	Q9NQ84	441 aa		5.6	□□□□□ -1.51
CCNL1-223	ENST00000481173	METTL5	Q9NRN9	209 aa	Known RBP	5.6	□□□□□ -1.51
CCNL1-223	ENST00000481173	PPP4R1L	Q9P1A2	415 aa		5.6	□□□□□ -1.51
CCNL1-223	ENST00000481173	DDX41	Q9UJV9	622 aa	Known RBP	5.6	□□□□□ -1.51
CCNL1-223	ENST00000481173	TRBV23OR9-2	A0A075B6M9	112 aa		5.59	□□□□□ -1.51
CCNL1-223	ENST00000481173	B4GALT3	O60512	393 aa		5.59	□□□□□ -1.51
CCNL1-223	ENST00000481173	RECK	O95980	971 aa		5.59	□□□□□ -1.51
CCNL1-223	ENST00000481173	THBD	P07204	575 aa		5.59	□□□□□ -1.51
CCNL1-223	ENST00000481173	ZC3H18	Q86VM9	953 aa	Known RBP	5.59	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms