RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 FAM47CQ5HY64 1035 aa17.79■□□□□ 0.44
LIMS3-203ENST00000480744 FBXO11Q86XK2 927 aa17.79■□□□□ 0.44
LIMS3-203ENST00000480744 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.79■□□□□ 0.44
LIMS3-203ENST00000480744 RGS22Q8NE09 1264 aa17.79■□□□□ 0.44
LIMS3-203ENST00000480744 MTG1Q9BT17 334 aaPredicted RBP17.79■□□□□ 0.44
LIMS3-203ENST00000480744 ALDH8A1Q9H2A2 487 aaPredicted RBP17.79■□□□□ 0.44
LIMS3-203ENST00000480744 TRMT13Q9NUP7 481 aaKnown RBP17.79■□□□□ 0.44
LIMS3-203ENST00000480744 FGBP02675 491 aa17.78■□□□□ 0.44
LIMS3-203ENST00000480744 CHMP4BP1P59074 171 aa17.78■□□□□ 0.44
LIMS3-203ENST00000480744 TRDNQ13061 729 aa17.78■□□□□ 0.44
LIMS3-203ENST00000480744 TTLL4Q14679 1199 aa17.78■□□□□ 0.44
LIMS3-203ENST00000480744 CYB5R4Q7L1T6 521 aa17.78■□□□□ 0.44
LIMS3-203ENST00000480744 MCF2L2Q86YR7 1114 aa17.78■□□□□ 0.44
LIMS3-203ENST00000480744 SYTL5Q8TDW5 730 aaPredicted RBP17.78■□□□□ 0.44
LIMS3-203ENST00000480744 PPP1R13LQ8WUF5 828 aa17.78■□□□□ 0.44
LIMS3-203ENST00000480744 RUFY2Q8WXA3 655 aa17.78■□□□□ 0.44
LIMS3-203ENST00000480744 TIFAQ96CG3 184 aa17.78■□□□□ 0.44
LIMS3-203ENST00000480744 TAAR1Q96RJ0 339 aa17.78■□□□□ 0.44
LIMS3-203ENST00000480744 JMJD4Q9H9V9 463 aa17.78■□□□□ 0.44
LIMS3-203ENST00000480744 MRPL11Q9Y3B7 192 aaKnown RBP17.78■□□□□ 0.44
LIMS3-203ENST00000480744 BAZ2BQ9UIF8 2168 aaKnown RBP17.78■□□□□ 0.44
LIMS3-203ENST00000480744 CYP2C9P11712 490 aa17.77■□□□□ 0.44
LIMS3-203ENST00000480744 PBX2P40425 430 aa17.77■□□□□ 0.44
LIMS3-203ENST00000480744 GRIN2CQ14957 1233 aa17.77■□□□□ 0.44
LIMS3-203ENST00000480744 SEPT14Q6ZU15 432 aa17.77■□□□□ 0.44
LIMS3-203ENST00000480744 STAG2Q8N3U4 1231 aa17.77■□□□□ 0.44
LIMS3-203ENST00000480744 NSUN6Q8TEA1 469 aaKnown RBP17.77■□□□□ 0.44
LIMS3-203ENST00000480744 SCLYQ96I15 445 aa17.77■□□□□ 0.44
LIMS3-203ENST00000480744 WNT8AQ9H1J5 351 aa17.77■□□□□ 0.44
LIMS3-203ENST00000480744 MTIF3Q9H2K0 278 aaKnown RBP17.77■□□□□ 0.44
LIMS3-203ENST00000480744 ZNF576Q9H609 170 aa17.77■□□□□ 0.44
LIMS3-203ENST00000480744 COL20A1Q9P218 1284 aa17.77■□□□□ 0.44
LIMS3-203ENST00000480744 KLRF2D3W0D1 207 aa17.76■□□□□ 0.43
LIMS3-203ENST00000480744 ARIH2O95376 493 aa17.76■□□□□ 0.43
LIMS3-203ENST00000480744 CFBP00751 764 aa17.76■□□□□ 0.43
LIMS3-203ENST00000480744 SUPT20HL2P0C7V6 817 aa17.76■□□□□ 0.43
LIMS3-203ENST00000480744 SEC23AQ15436 765 aa17.76■□□□□ 0.43
LIMS3-203ENST00000480744 NBPF20Q3BBV1 942 aa17.76■□□□□ 0.43
LIMS3-203ENST00000480744 RASIP1Q5U651 963 aa17.76■□□□□ 0.43
LIMS3-203ENST00000480744 OTOP2Q7RTS6 562 aa17.76■□□□□ 0.43
LIMS3-203ENST00000480744 HERVK_113Q902F9 699 aa17.76■□□□□ 0.43
LIMS3-203ENST00000480744 RMDN3Q96TC7 470 aa17.76■□□□□ 0.43
LIMS3-203ENST00000480744 PBX4Q9BYU1 374 aa17.76■□□□□ 0.43
LIMS3-203ENST00000480744 CXXC1Q9P0U4 656 aaPredicted RBP17.76■□□□□ 0.43
LIMS3-203ENST00000480744 TRIP12Q14669 1992 aaPredicted RBP17.76■□□□□ 0.43
LIMS3-203ENST00000480744 TANC1Q9C0D5 1861 aa17.75■□□□□ 0.43
LIMS3-203ENST00000480744 A0A0C4DFX4 3053 aa17.75■□□□□ 0.43
LIMS3-203ENST00000480744 A6NJR5 290 aa17.75■□□□□ 0.43
LIMS3-203ENST00000480744 KPNA6O60684 536 aa17.75■□□□□ 0.43
LIMS3-203ENST00000480744 EIF2AK2P19525 551 aaKnown RBP17.75■□□□□ 0.43
LIMS3-203ENST00000480744 CHMLP26374 656 aa17.75■□□□□ 0.43
LIMS3-203ENST00000480744 PTH1RQ03431 593 aa17.75■□□□□ 0.43
LIMS3-203ENST00000480744 STXBP2Q15833 593 aa17.75■□□□□ 0.43
LIMS3-203ENST00000480744 ARHGEF16Q5VV41 709 aa17.75■□□□□ 0.43
LIMS3-203ENST00000480744 CHST3Q7LGC8 479 aa17.75■□□□□ 0.43
LIMS3-203ENST00000480744 AMNQ9BXJ7 453 aa17.75■□□□□ 0.43
LIMS3-203ENST00000480744 MAF1Q9H063 256 aa17.75■□□□□ 0.43
LIMS3-203ENST00000480744 U3KPZ7 1027 aaPredicted RBP17.75■□□□□ 0.43
LIMS3-203ENST00000480744 CUL9Q8IWT3 2517 aa17.75■□□□□ 0.43
LIMS3-203ENST00000480744 UNC80Q8N2C7 3258 aa17.74■□□□□ 0.43
LIMS3-203ENST00000480744 ZBBXA8MT70 800 aa17.74■□□□□ 0.43
LIMS3-203ENST00000480744 IFIT3O14879 490 aaKnown RBP17.74■□□□□ 0.43
LIMS3-203ENST00000480744 CYP21A2P08686 494 aa17.74■□□□□ 0.43
LIMS3-203ENST00000480744 LY6KQ17RY6 165 aa17.74■□□□□ 0.43
LIMS3-203ENST00000480744 RALYLQ86SE5 291 aaKnown RBP17.74■□□□□ 0.43
LIMS3-203ENST00000480744 HOMER1Q86YM7 354 aa17.74■□□□□ 0.43
LIMS3-203ENST00000480744 RPUSD2Q8IZ73 545 aaKnown RBP17.74■□□□□ 0.43
LIMS3-203ENST00000480744 AFG1LQ8WV93 481 aa17.74■□□□□ 0.43
LIMS3-203ENST00000480744 MAD2L2Q9UI95 211 aa17.74■□□□□ 0.43
LIMS3-203ENST00000480744 MSRAQ9UJ68 235 aa17.74■□□□□ 0.43
LIMS3-203ENST00000480744 CDH23Q9H251 3354 aa17.74■□□□□ 0.43
LIMS3-203ENST00000480744 ERICH2A1L162 156 aa17.73■□□□□ 0.43
LIMS3-203ENST00000480744 GH1P01241 217 aa17.73■□□□□ 0.43
LIMS3-203ENST00000480744 CCDC62Q6P9F0 684 aa17.73■□□□□ 0.43
LIMS3-203ENST00000480744 DEFB128Q7Z7B8 93 aa17.73■□□□□ 0.43
LIMS3-203ENST00000480744 IWS1Q96ST2 819 aa17.73■□□□□ 0.43
LIMS3-203ENST00000480744 NOD1Q9Y239 953 aa17.73■□□□□ 0.43
LIMS3-203ENST00000480744 PCDHA1Q9Y5I3 950 aa17.73■□□□□ 0.43
LIMS3-203ENST00000480744 EYSQ5T1H1 3165 aa17.73■□□□□ 0.43
LIMS3-203ENST00000480744 ZBTB5O15062 677 aa17.72■□□□□ 0.43
LIMS3-203ENST00000480744 PPP1R11O60927 126 aaPredicted RBP17.72■□□□□ 0.43
LIMS3-203ENST00000480744 MMP3P08254 477 aa17.72■□□□□ 0.43
LIMS3-203ENST00000480744 RAB30Q15771 203 aa17.72■□□□□ 0.43
LIMS3-203ENST00000480744 NFRKBQ6P4R8 1299 aa17.72■□□□□ 0.43
LIMS3-203ENST00000480744 COL25A1Q9BXS0 654 aaPredicted RBP17.72■□□□□ 0.43
LIMS3-203ENST00000480744 NKX2-4Q9H2Z4 354 aa17.72■□□□□ 0.43
LIMS3-203ENST00000480744 PXMP2Q9NR77 195 aa17.72■□□□□ 0.43
LIMS3-203ENST00000480744 TAF6LQ9Y6J9 622 aa17.72■□□□□ 0.43
LIMS3-203ENST00000480744 SLC4A7Q9Y6M7 1214 aa17.72■□□□□ 0.43
LIMS3-203ENST00000480744 PALM3A6NDB9 673 aaPredicted RBP17.71■□□□□ 0.43
LIMS3-203ENST00000480744 E7EWF7 191 aa17.71■□□□□ 0.43
LIMS3-203ENST00000480744 NR3C2P08235 984 aa17.71■□□□□ 0.43
LIMS3-203ENST00000480744 MYCLP12524 364 aaPredicted RBP17.71■□□□□ 0.43
LIMS3-203ENST00000480744 HOXA13P31271 388 aaPredicted RBP17.71■□□□□ 0.43
LIMS3-203ENST00000480744 HSD17B4P51659 736 aa17.71■□□□□ 0.43
LIMS3-203ENST00000480744 ARHGAP1Q07960 439 aa17.71■□□□□ 0.43
LIMS3-203ENST00000480744 GRM4Q14833 912 aa17.71■□□□□ 0.43
LIMS3-203ENST00000480744 WTAPQ15007 396 aa17.71■□□□□ 0.43
LIMS3-203ENST00000480744 SART3Q15020 963 aaKnown RBP17.71■□□□□ 0.43
LIMS3-203ENST00000480744 RETREG2Q8NC44 543 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms