RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 ERC2O15083 957 aa12.25□□□□□ -0.45
SMURF1-204ENST00000480055 DYNC1LI2O43237 492 aaPredicted RBP12.25□□□□□ -0.45
SMURF1-204ENST00000480055 ZEB2O60315 1214 aa12.25□□□□□ -0.45
SMURF1-204ENST00000480055 B4GALT4O60513 344 aa12.25□□□□□ -0.45
SMURF1-204ENST00000480055 FDX1P10109 184 aa12.25□□□□□ -0.45
SMURF1-204ENST00000480055 ALAS1P13196 640 aa12.25□□□□□ -0.45
SMURF1-204ENST00000480055 SLC1A4P43007 532 aa12.25□□□□□ -0.45
SMURF1-204ENST00000480055 KCNQ1P51787 676 aa12.25□□□□□ -0.45
SMURF1-204ENST00000480055 TFAP4Q01664 338 aa12.25□□□□□ -0.45
SMURF1-204ENST00000480055 ITGA7Q13683 1181 aa12.25□□□□□ -0.45
SMURF1-204ENST00000480055 TLK2Q86UE8 772 aa12.25□□□□□ -0.45
SMURF1-204ENST00000480055 FAM160B2Q86V87 743 aa12.25□□□□□ -0.45
SMURF1-204ENST00000480055 MICALL1Q8N3F8 863 aa12.25□□□□□ -0.45
SMURF1-204ENST00000480055 FAM133AQ8N9E0 248 aa12.25□□□□□ -0.45
SMURF1-204ENST00000480055 VWCEQ96DN2 955 aa12.25□□□□□ -0.45
SMURF1-204ENST00000480055 AGBL1Q96MI9 1066 aa12.25□□□□□ -0.45
SMURF1-204ENST00000480055 TRERF1Q96PN7 1200 aa12.25□□□□□ -0.45
SMURF1-204ENST00000480055 CDHR5Q9HBB8 845 aa12.25□□□□□ -0.45
SMURF1-204ENST00000480055 EPB41L4AQ9HCS5 686 aaPredicted RBP12.25□□□□□ -0.45
SMURF1-204ENST00000480055 RNF146Q9NTX7 359 aa12.25□□□□□ -0.45
SMURF1-204ENST00000480055 RCAN3Q9UKA8 241 aa12.25□□□□□ -0.45
SMURF1-204ENST00000480055 SYNPO2Q9UMS6 1093 aa12.25□□□□□ -0.45
SMURF1-204ENST00000480055 MTMR7Q9Y216 660 aa12.25□□□□□ -0.45
SMURF1-204ENST00000480055 SLC4A7Q9Y6M7 1214 aa12.25□□□□□ -0.45
SMURF1-204ENST00000480055 GRIN2DO15399 1336 aa12.25□□□□□ -0.45
SMURF1-204ENST00000480055 MYOGP15173 224 aa12.24□□□□□ -0.45
SMURF1-204ENST00000480055 POU3F3P20264 500 aaPredicted RBP12.24□□□□□ -0.45
SMURF1-204ENST00000480055 MCCP23508 829 aa12.24□□□□□ -0.45
SMURF1-204ENST00000480055 CCL23P55773 120 aa12.24□□□□□ -0.45
SMURF1-204ENST00000480055 SNAP25P60880 206 aa12.24□□□□□ -0.45
SMURF1-204ENST00000480055 FSCN1Q16658 493 aaKnown RBP12.24□□□□□ -0.45
SMURF1-204ENST00000480055 KIAA1217Q5T5P2 1943 aa12.24□□□□□ -0.45
SMURF1-204ENST00000480055 EEPD1Q7L9B9 569 aa12.24□□□□□ -0.45
SMURF1-204ENST00000480055 NEDD1Q8NHV4 660 aa12.24□□□□□ -0.45
SMURF1-204ENST00000480055 STAG1Q8WVM7 1258 aa12.24□□□□□ -0.45
SMURF1-204ENST00000480055 YTHDC1Q96MU7 727 aaKnown RBP12.24□□□□□ -0.45
SMURF1-204ENST00000480055 PLIN4Q96Q06 1357 aa12.24□□□□□ -0.45
SMURF1-204ENST00000480055 NAPBQ9H115 298 aa12.24□□□□□ -0.45
SMURF1-204ENST00000480055 A1CFQ9NQ94 594 aaKnown RBP12.24□□□□□ -0.45
SMURF1-204ENST00000480055 STX8Q9UNK0 236 aa12.24□□□□□ -0.45
SMURF1-204ENST00000480055 MUC6Q6W4X9 2439 aa12.23□□□□□ -0.45
SMURF1-204ENST00000480055 SOWAHBA6NEL2 793 aa12.23□□□□□ -0.45
SMURF1-204ENST00000480055 PFKMP08237 780 aa12.23□□□□□ -0.45
SMURF1-204ENST00000480055 ATP2A2P16615 1042 aaKnown RBP12.23□□□□□ -0.45
SMURF1-204ENST00000480055 TKFCQ3LXA3 575 aa12.23□□□□□ -0.45
SMURF1-204ENST00000480055 C20orf194Q5TEA3 1177 aa12.23□□□□□ -0.45
SMURF1-204ENST00000480055 KCTD1Q719H9 257 aa12.23□□□□□ -0.45
SMURF1-204ENST00000480055 RPUSD2Q8IZ73 545 aaKnown RBP12.23□□□□□ -0.45
SMURF1-204ENST00000480055 SEC62Q99442 399 aaKnown RBP12.23□□□□□ -0.45
SMURF1-204ENST00000480055 FSD1Q9BTV5 496 aa12.23□□□□□ -0.45
SMURF1-204ENST00000480055 TRPV6Q9H1D0 765 aa12.23□□□□□ -0.45
SMURF1-204ENST00000480055 MTCH2Q9Y6C9 303 aa12.23□□□□□ -0.45
SMURF1-204ENST00000480055 MYH6P13533 1939 aa12.22□□□□□ -0.45
SMURF1-204ENST00000480055 TSPY2A6NKD2 308 aa12.22□□□□□ -0.45
SMURF1-204ENST00000480055 ZBBXA8MT70 800 aa12.22□□□□□ -0.45
SMURF1-204ENST00000480055 SMPD1P17405 629 aa12.22□□□□□ -0.45
SMURF1-204ENST00000480055 PTGS1P23219 599 aa12.22□□□□□ -0.45
SMURF1-204ENST00000480055 PSMC6P62333 389 aa12.22□□□□□ -0.45
SMURF1-204ENST00000480055 PPARAQ07869 468 aa12.22□□□□□ -0.45
SMURF1-204ENST00000480055 IQSEC1Q6DN90 963 aa12.22□□□□□ -0.45
SMURF1-204ENST00000480055 NSMFQ6X4W1 530 aa12.22□□□□□ -0.45
SMURF1-204ENST00000480055 KIAA1211Q6ZU35 1233 aa12.22□□□□□ -0.45
SMURF1-204ENST00000480055 FBXO16Q8IX29 292 aaPredicted RBP12.22□□□□□ -0.45
SMURF1-204ENST00000480055 SCLYQ96I15 445 aa12.22□□□□□ -0.45
SMURF1-204ENST00000480055 GMCL1Q96IK5 515 aa12.22□□□□□ -0.45
SMURF1-204ENST00000480055 LRFN3Q9BTN0 628 aa12.22□□□□□ -0.45
SMURF1-204ENST00000480055 PDGFCQ9NRA1 345 aa12.22□□□□□ -0.45
SMURF1-204ENST00000480055 HCN4Q9Y3Q4 1203 aa12.22□□□□□ -0.45
SMURF1-204ENST00000480055 DDX49Q9Y6V7 483 aaKnown RBP12.22□□□□□ -0.45
SMURF1-204ENST00000480055 PIEZO1Q92508 2521 aa12.22□□□□□ -0.45
SMURF1-204ENST00000480055 NLRC5Q86WI3 1866 aa12.22□□□□□ -0.45
SMURF1-204ENST00000480055 ZNF536O15090 1300 aa12.21□□□□□ -0.45
SMURF1-204ENST00000480055 CA3P07451 260 aa12.21□□□□□ -0.45
SMURF1-204ENST00000480055 LSM11P83369 360 aaKnown RBP eCLIP12.21□□□□□ -0.45
SMURF1-204ENST00000480055 TTLL4Q14679 1199 aa12.21□□□□□ -0.45
SMURF1-204ENST00000480055 SKIV2LQ15477 1246 aaKnown RBP12.21□□□□□ -0.45
SMURF1-204ENST00000480055 CCDC96Q2M329 555 aa12.21□□□□□ -0.45
SMURF1-204ENST00000480055 TMEM67Q5HYA8 995 aa12.21□□□□□ -0.45
SMURF1-204ENST00000480055 DMRTA1Q5VZB9 504 aa12.21□□□□□ -0.45
SMURF1-204ENST00000480055 RCSD1Q6JBY9 416 aa12.21□□□□□ -0.45
SMURF1-204ENST00000480055 TAPT1Q6NXT6 567 aa12.21□□□□□ -0.45
SMURF1-204ENST00000480055 ALDH8A1Q9H2A2 487 aaPredicted RBP12.21□□□□□ -0.45
SMURF1-204ENST00000480055 DCTPP1Q9H773 170 aa12.21□□□□□ -0.45
SMURF1-204ENST00000480055 CCPG1Q9ULG6 757 aa12.21□□□□□ -0.45
SMURF1-204ENST00000480055 COG5Q9UP83 839 aa12.21□□□□□ -0.45
SMURF1-204ENST00000480055 Q9Y3F1 56 aa12.21□□□□□ -0.45
SMURF1-204ENST00000480055 MICAL3Q7RTP6 2002 aa12.21□□□□□ -0.46
SMURF1-204ENST00000480055 ATG2AQ2TAZ0 1938 aa12.21□□□□□ -0.46
SMURF1-204ENST00000480055 MYH7BA7E2Y1 1941 aa12.2□□□□□ -0.46
SMURF1-204ENST00000480055 EPOPA6NHQ4 379 aa12.2□□□□□ -0.46
SMURF1-204ENST00000480055 RFXAPO00287 272 aa12.2□□□□□ -0.46
SMURF1-204ENST00000480055 RANBP6O60518 1105 aaKnown RBP12.2□□□□□ -0.46
SMURF1-204ENST00000480055 CTDSPL2Q05D32 466 aa12.2□□□□□ -0.46
SMURF1-204ENST00000480055 PTGDRQ13258 359 aa12.2□□□□□ -0.46
SMURF1-204ENST00000480055 MUM1L1Q5H9M0 696 aa12.2□□□□□ -0.46
SMURF1-204ENST00000480055 SLC9A7Q96T83 725 aa12.2□□□□□ -0.46
SMURF1-204ENST00000480055 EPHX3Q9H6B9 360 aa12.2□□□□□ -0.46
SMURF1-204ENST00000480055 TOMM22Q9NS69 142 aa12.2□□□□□ -0.46
SMURF1-204ENST00000480055 CYP39A1Q9NYL5 469 aa12.2□□□□□ -0.46
SMURF1-204ENST00000480055 PRR12Q9ULL5 1215 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms