RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 ADCY7P51828 1080 aa28.74■■■□□ 2.19
PERM1-203ENST00000479361 ACVR2BQ13705 512 aa28.74■■■□□ 2.19
PERM1-203ENST00000479361 TYW1BQ6NUM6 668 aa28.74■■■□□ 2.19
PERM1-203ENST00000479361 USP17L6PQ6QN14 398 aa28.74■■■□□ 2.19
PERM1-203ENST00000479361 TRPV1Q8NER1 839 aa28.74■■■□□ 2.19
PERM1-203ENST00000479361 CCDC148Q8NFR7 591 aa28.74■■■□□ 2.19
PERM1-203ENST00000479361 SH3GLB2Q9NR46 395 aa28.74■■■□□ 2.19
PERM1-203ENST00000479361 PXMP2Q9NR77 195 aa28.74■■■□□ 2.19
PERM1-203ENST00000479361 ZHX1Q9UKY1 873 aaPredicted RBP28.74■■■□□ 2.19
PERM1-203ENST00000479361 LCTP09848 1927 aa28.74■■■□□ 2.19
PERM1-203ENST00000479361 ESYT2A0FGR8 921 aa28.73■■■□□ 2.19
PERM1-203ENST00000479361 SEPT4O43236 478 aa28.73■■■□□ 2.19
PERM1-203ENST00000479361 CTDNEP1O95476 244 aa28.73■■■□□ 2.19
PERM1-203ENST00000479361 EDNRBP24530 442 aa28.73■■■□□ 2.19
PERM1-203ENST00000479361 WASF1Q92558 559 aa28.73■■■□□ 2.19
PERM1-203ENST00000479361 DEFB118Q96PH6 123 aa28.73■■■□□ 2.19
PERM1-203ENST00000479361 ZNF865P0CJ78 1059 aaPredicted RBP28.72■■■□□ 2.19
PERM1-203ENST00000479361 CAPN2P17655 700 aa28.72■■■□□ 2.19
PERM1-203ENST00000479361 EIF2AK2P19525 551 aaKnown RBP28.72■■■□□ 2.19
PERM1-203ENST00000479361 FAM177A1Q8N128 213 aaPredicted RBP28.72■■■□□ 2.19
PERM1-203ENST00000479361 C6orf50Q9HD87 102 aa28.72■■■□□ 2.19
PERM1-203ENST00000479361 VTA1Q9NP79 307 aa28.72■■■□□ 2.19
PERM1-203ENST00000479361 ORC3Q9UBD5 711 aaPredicted RBP28.72■■■□□ 2.19
PERM1-203ENST00000479361 DDX20Q9UHI6 824 aaKnown RBP28.72■■■□□ 2.19
PERM1-203ENST00000479361 GNA11P29992 359 aa28.71■■■□□ 2.19
PERM1-203ENST00000479361 CCDC83Q8IWF9 413 aa28.71■■■□□ 2.19
PERM1-203ENST00000479361 NSUN7Q8NE18 718 aaKnown RBP28.71■■■□□ 2.19
PERM1-203ENST00000479361 LLPHQ9BRT6 129 aaKnown RBP28.71■■■□□ 2.19
PERM1-203ENST00000479361 ZMYND12Q9H0C1 365 aa28.71■■■□□ 2.19
PERM1-203ENST00000479361 SPDYE3A6NKU9 549 aa28.7■■■□□ 2.18
PERM1-203ENST00000479361 AKR1A1P14550 325 aa28.7■■■□□ 2.18
PERM1-203ENST00000479361 XBP1P17861 261 aa28.7■■■□□ 2.18
PERM1-203ENST00000479361 GJA8P48165 433 aa28.7■■■□□ 2.18
PERM1-203ENST00000479361 STXBP2Q15833 593 aa28.7■■■□□ 2.18
PERM1-203ENST00000479361 BICD2Q8TD16 824 aa28.7■■■□□ 2.18
PERM1-203ENST00000479361 U2AF1L4Q8WU68 220 aaKnown RBP28.7■■■□□ 2.18
PERM1-203ENST00000479361 PDCD2LQ9BRP1 358 aa28.7■■■□□ 2.18
PERM1-203ENST00000479361 KATNBL1Q9H079 304 aa28.7■■■□□ 2.18
PERM1-203ENST00000479361 VPS54Q9P1Q0 977 aa28.7■■■□□ 2.18
PERM1-203ENST00000479361 FAM184BQ9ULE4 1060 aa28.7■■■□□ 2.18
PERM1-203ENST00000479361 SGPL1O95470 568 aa28.69■■■□□ 2.18
PERM1-203ENST00000479361 NR3C2P08235 984 aa28.69■■■□□ 2.18
PERM1-203ENST00000479361 UBE2SQ16763 222 aa28.69■■■□□ 2.18
PERM1-203ENST00000479361 EEPD1Q7L9B9 569 aa28.69■■■□□ 2.18
PERM1-203ENST00000479361 EHMT1Q9H9B1 1298 aa28.69■■■□□ 2.18
PERM1-203ENST00000479361 DDX49Q9Y6V7 483 aaKnown RBP28.69■■■□□ 2.18
PERM1-203ENST00000479361 CD2BP2O95400 341 aaKnown RBP28.68■■■□□ 2.18
PERM1-203ENST00000479361 FOSP01100 380 aaPredicted RBP28.68■■■□□ 2.18
PERM1-203ENST00000479361 SOX10P56693 466 aa28.68■■■□□ 2.18
PERM1-203ENST00000479361 NLRP5P59047 1200 aa28.68■■■□□ 2.18
PERM1-203ENST00000479361 ST3GAL1Q11201 340 aa28.68■■■□□ 2.18
PERM1-203ENST00000479361 MCTP2Q6DN12 878 aa28.68■■■□□ 2.18
PERM1-203ENST00000479361 FBXO16Q8IX29 292 aaPredicted RBP28.68■■■□□ 2.18
PERM1-203ENST00000479361 FRMPD4Q14CM0 1322 aa28.68■■■□□ 2.18
PERM1-203ENST00000479361 POTEFA5A3E0 1075 aa28.67■■■□□ 2.18
PERM1-203ENST00000479361 TFRCP02786 760 aaKnown RBP28.67■■■□□ 2.18
PERM1-203ENST00000479361 CCND2P30279 289 aa28.67■■■□□ 2.18
PERM1-203ENST00000479361 PGM5Q15124 567 aa28.67■■■□□ 2.18
PERM1-203ENST00000479361 CCDC144BQ3MJ40 725 aa28.67■■■□□ 2.18
PERM1-203ENST00000479361 TMX3Q96JJ7 454 aa28.67■■■□□ 2.18
PERM1-203ENST00000479361 MCM3APO60318 1980 aa28.67■■■□□ 2.18
PERM1-203ENST00000479361 EIF3JO75822 258 aaKnown RBP28.66■■■□□ 2.18
PERM1-203ENST00000479361 RARBP10826 455 aa28.66■■■□□ 2.18
PERM1-203ENST00000479361 AP3B2Q13367 1082 aa28.66■■■□□ 2.18
PERM1-203ENST00000479361 LHX8Q68G74 356 aa28.66■■■□□ 2.18
PERM1-203ENST00000479361 AIFM3Q96NN9 605 aa28.66■■■□□ 2.18
PERM1-203ENST00000479361 CRISPLD2Q9H0B8 497 aa28.66■■■□□ 2.18
PERM1-203ENST00000479361 PCDHA6Q9UN73 950 aa28.66■■■□□ 2.18
PERM1-203ENST00000479361 PCDHA8Q9Y5H6 950 aa28.66■■■□□ 2.18
PERM1-203ENST00000479361 JAK2O60674 1132 aa28.65■■■□□ 2.18
PERM1-203ENST00000479361 MYCLP12524 364 aaPredicted RBP28.65■■■□□ 2.18
PERM1-203ENST00000479361 FDPSP14324 419 aaKnown RBP28.65■■■□□ 2.18
PERM1-203ENST00000479361 HMGN5P82970 282 aaKnown RBP28.65■■■□□ 2.18
PERM1-203ENST00000479361 IQSEC1Q6DN90 963 aa28.65■■■□□ 2.18
PERM1-203ENST00000479361 GALNT17Q6IS24 598 aa28.65■■■□□ 2.18
PERM1-203ENST00000479361 TAPT1Q6NXT6 567 aa28.65■■■□□ 2.18
PERM1-203ENST00000479361 XRRA1Q6P2D8 792 aa28.65■■■□□ 2.18
PERM1-203ENST00000479361 VSIG10LQ86VR7 867 aa28.65■■■□□ 2.18
PERM1-203ENST00000479361 REXO1Q8N1G1 1221 aaKnown RBP28.65■■■□□ 2.18
PERM1-203ENST00000479361 ALG1Q9BT22 464 aa28.65■■■□□ 2.18
PERM1-203ENST00000479361 STAM2O75886 525 aa28.64■■■□□ 2.18
PERM1-203ENST00000479361 CLK2P49760 499 aaKnown RBP28.64■■■□□ 2.18
PERM1-203ENST00000479361 OGDHLQ9ULD0 1010 aa28.64■■■□□ 2.18
PERM1-203ENST00000479361 BRCA2P51587 3418 aa28.64■■■□□ 2.18
PERM1-203ENST00000479361 KIAA0100Q14667 2235 aaKnown RBP28.63■■■□□ 2.17
PERM1-203ENST00000479361 EN2P19622 333 aaPredicted RBP28.63■■■□□ 2.17
PERM1-203ENST00000479361 TNFAIP2Q03169 654 aa28.63■■■□□ 2.17
PERM1-203ENST00000479361 PCNX4Q63HM2 1172 aa28.63■■■□□ 2.17
PERM1-203ENST00000479361 SCFD2Q8WU76 684 aa28.63■■■□□ 2.17
PERM1-203ENST00000479361 SHISA4Q96DD7 197 aa28.63■■■□□ 2.17
PERM1-203ENST00000479361 PCDHA4Q9UN74 947 aa28.63■■■□□ 2.17
PERM1-203ENST00000479361 LRRC37A2A6NM11 1700 aa28.63■■■□□ 2.17
PERM1-203ENST00000479361 RBM47A0AV96 593 aaKnown RBP28.62■■■□□ 2.17
PERM1-203ENST00000479361 DTNBO60941 627 aa28.62■■■□□ 2.17
PERM1-203ENST00000479361 DUSP11O75319 330 aaKnown RBP28.62■■■□□ 2.17
PERM1-203ENST00000479361 CAPN15O75808 1086 aa28.62■■■□□ 2.17
PERM1-203ENST00000479361 ADCYAP1R1P41586 468 aa28.62■■■□□ 2.17
PERM1-203ENST00000479361 ANO1Q5XXA6 986 aa28.62■■■□□ 2.17
PERM1-203ENST00000479361 IL31RAQ8NI17 732 aa28.62■■■□□ 2.17
PERM1-203ENST00000479361 XPNPEP3Q9NQH7 507 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms