RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 FBXO16Q8IX29 292 aaPredicted RBP13.06□□□□□ -0.32
SRRT-211ENST00000478693 FAM184AQ8NB25 1140 aa13.06□□□□□ -0.32
SRRT-211ENST00000478693 ALG1Q9BT22 464 aa13.06□□□□□ -0.32
SRRT-211ENST00000478693 RIC8AQ9NPQ8 531 aa13.06□□□□□ -0.32
SRRT-211ENST00000478693 PXMP2Q9NR77 195 aa13.06□□□□□ -0.32
SRRT-211ENST00000478693 DDX49Q9Y6V7 483 aaKnown RBP13.06□□□□□ -0.32
SRRT-211ENST00000478693 ASTN1O14525 1302 aa13.06□□□□□ -0.32
SRRT-211ENST00000478693 LOC102724159A0A0B4J2E5 919 aa13.05□□□□□ -0.32
SRRT-211ENST00000478693 PIK3CDO00329 1044 aa13.05□□□□□ -0.32
SRRT-211ENST00000478693 CAPN15O75808 1086 aa13.05□□□□□ -0.32
SRRT-211ENST00000478693 MYCLP12524 364 aaPredicted RBP13.05□□□□□ -0.32
SRRT-211ENST00000478693 AKR1A1P14550 325 aa13.05□□□□□ -0.32
SRRT-211ENST00000478693 HMGN5P82970 282 aaKnown RBP13.05□□□□□ -0.32
SRRT-211ENST00000478693 GHRHRQ02643 423 aa13.05□□□□□ -0.32
SRRT-211ENST00000478693 ST3GAL1Q11201 340 aa13.05□□□□□ -0.32
SRRT-211ENST00000478693 ACVR2BQ13705 512 aa13.05□□□□□ -0.32
SRRT-211ENST00000478693 PWP2Q15269 919 aaKnown RBP13.05□□□□□ -0.32
SRRT-211ENST00000478693 MAP3K21Q5TCX8 1036 aa13.05□□□□□ -0.32
SRRT-211ENST00000478693 HSCBQ8IWL3 235 aa13.05□□□□□ -0.32
SRRT-211ENST00000478693 BICD2Q8TD16 824 aa13.05□□□□□ -0.32
SRRT-211ENST00000478693 TMX3Q96JJ7 454 aa13.05□□□□□ -0.32
SRRT-211ENST00000478693 AIFM3Q96NN9 605 aa13.05□□□□□ -0.32
SRRT-211ENST00000478693 LLPHQ9BRT6 129 aaKnown RBP13.05□□□□□ -0.32
SRRT-211ENST00000478693 ABHD16BQ9H3Z7 469 aa13.05□□□□□ -0.32
SRRT-211ENST00000478693 SH3GLB2Q9NR46 395 aa13.05□□□□□ -0.32
SRRT-211ENST00000478693 NRBP1Q9UHY1 535 aa13.05□□□□□ -0.32
SRRT-211ENST00000478693 PLXNA1Q9UIW2 1896 aa13.05□□□□□ -0.32
SRRT-211ENST00000478693 ESYT2A0FGR8 921 aa13.04□□□□□ -0.32
SRRT-211ENST00000478693 MEIS2O14770 477 aa13.04□□□□□ -0.32
SRRT-211ENST00000478693 MSCO60682 206 aa13.04□□□□□ -0.32
SRRT-211ENST00000478693 SNAI1O95863 264 aaPredicted RBP13.04□□□□□ -0.32
SRRT-211ENST00000478693 MYCNP04198 464 aaPredicted RBP13.04□□□□□ -0.32
SRRT-211ENST00000478693 CCND2P30279 289 aa13.04□□□□□ -0.32
SRRT-211ENST00000478693 SOX10P56693 466 aa13.04□□□□□ -0.32
SRRT-211ENST00000478693 PGM5Q15124 567 aa13.04□□□□□ -0.32
SRRT-211ENST00000478693 STXBP2Q15833 593 aa13.04□□□□□ -0.32
SRRT-211ENST00000478693 JAKMIP3Q5VZ66 844 aa13.04□□□□□ -0.32
SRRT-211ENST00000478693 ANO1Q5XXA6 986 aa13.04□□□□□ -0.32
SRRT-211ENST00000478693 REXO1Q8N1G1 1221 aaKnown RBP13.04□□□□□ -0.32
SRRT-211ENST00000478693 PGBD1Q96JS3 809 aa13.04□□□□□ -0.32
SRRT-211ENST00000478693 DEFB118Q96PH6 123 aa13.04□□□□□ -0.32
SRRT-211ENST00000478693 IWS1Q96ST2 819 aa13.04□□□□□ -0.32
SRRT-211ENST00000478693 PDCD2LQ9BRP1 358 aa13.04□□□□□ -0.32
SRRT-211ENST00000478693 ZMYND12Q9H0C1 365 aa13.04□□□□□ -0.32
SRRT-211ENST00000478693 BRMS1Q9HCU9 246 aa13.04□□□□□ -0.32
SRRT-211ENST00000478693 VTA1Q9NP79 307 aa13.04□□□□□ -0.32
SRRT-211ENST00000478693 DDX20Q9UHI6 824 aaKnown RBP13.04□□□□□ -0.32
SRRT-211ENST00000478693 FAM184BQ9ULE4 1060 aa13.04□□□□□ -0.32
SRRT-211ENST00000478693 PCDHA6Q9UN73 950 aa13.04□□□□□ -0.32
SRRT-211ENST00000478693 PCDHA8Q9Y5H6 950 aa13.04□□□□□ -0.32
SRRT-211ENST00000478693 SEPT4O43236 478 aa13.03□□□□□ -0.32
SRRT-211ENST00000478693 NR3C2P08235 984 aa13.03□□□□□ -0.32
SRRT-211ENST00000478693 AP3B2Q13367 1082 aa13.03□□□□□ -0.32
SRRT-211ENST00000478693 TRPV1Q8NER1 839 aa13.03□□□□□ -0.32
SRRT-211ENST00000478693 U2AF1L4Q8WU68 220 aaKnown RBP13.03□□□□□ -0.32
SRRT-211ENST00000478693 ANO3Q9BYT9 981 aa13.03□□□□□ -0.32
SRRT-211ENST00000478693 PAK6Q9NQU5 681 aaPredicted RBP13.03□□□□□ -0.32
SRRT-211ENST00000478693 TMEM260Q9NX78 707 aa13.03□□□□□ -0.32
SRRT-211ENST00000478693 KCNJ14Q9UNX9 436 aa13.03□□□□□ -0.32
SRRT-211ENST00000478693 KIF3AQ9Y496 699 aa13.03□□□□□ -0.32
SRRT-211ENST00000478693 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.03□□□□□ -0.32
SRRT-211ENST00000478693 FOSP01100 380 aaPredicted RBP13.02□□□□□ -0.33
SRRT-211ENST00000478693 TFRCP02786 760 aaKnown RBP13.02□□□□□ -0.33
SRRT-211ENST00000478693 GJB1P08034 283 aa13.02□□□□□ -0.33
SRRT-211ENST00000478693 ZNF865P0CJ78 1059 aaPredicted RBP13.02□□□□□ -0.33
SRRT-211ENST00000478693 RARBP10826 455 aa13.02□□□□□ -0.33
SRRT-211ENST00000478693 EDNRBP24530 442 aa13.02□□□□□ -0.33
SRRT-211ENST00000478693 CCDC144BQ3MJ40 725 aa13.02□□□□□ -0.33
SRRT-211ENST00000478693 MCTP2Q6DN12 878 aa13.02□□□□□ -0.33
SRRT-211ENST00000478693 SEPT14Q6ZU15 432 aa13.02□□□□□ -0.33
SRRT-211ENST00000478693 TEX2Q8IWB9 1127 aa13.02□□□□□ -0.33
SRRT-211ENST00000478693 FAM177A1Q8N128 213 aaPredicted RBP13.02□□□□□ -0.33
SRRT-211ENST00000478693 IL31RAQ8NI17 732 aa13.02□□□□□ -0.33
SRRT-211ENST00000478693 RASGRP4Q8TDF6 673 aa13.02□□□□□ -0.33
SRRT-211ENST00000478693 MORC4Q8TE76 937 aa13.02□□□□□ -0.33
SRRT-211ENST00000478693 C8orf76Q96K31 380 aa13.02□□□□□ -0.33
SRRT-211ENST00000478693 PCDHA4Q9UN74 947 aa13.02□□□□□ -0.33
SRRT-211ENST00000478693 SMC3Q9UQE7 1217 aa13.02□□□□□ -0.33
SRRT-211ENST00000478693 LRRC37A2A6NM11 1700 aa13.02□□□□□ -0.33
SRRT-211ENST00000478693 LCTP09848 1927 aa13.01□□□□□ -0.33
SRRT-211ENST00000478693 POTEFA5A3E0 1075 aa13.01□□□□□ -0.33
SRRT-211ENST00000478693 K7ELQ4 463 aaPredicted RBP13.01□□□□□ -0.33
SRRT-211ENST00000478693 IGHA2P01877 340 aa13.01□□□□□ -0.33
SRRT-211ENST00000478693 HSP90AA1P07900 732 aaKnown RBP13.01□□□□□ -0.33
SRRT-211ENST00000478693 FDPSP14324 419 aaKnown RBP13.01□□□□□ -0.33
SRRT-211ENST00000478693 ADCYAP1R1P41586 468 aa13.01□□□□□ -0.33
SRRT-211ENST00000478693 GNL2Q13823 731 aaKnown RBP13.01□□□□□ -0.33
SRRT-211ENST00000478693 GNPTABQ3T906 1256 aa13.01□□□□□ -0.33
SRRT-211ENST00000478693 GALNT17Q6IS24 598 aa13.01□□□□□ -0.33
SRRT-211ENST00000478693 BLIDQ8IZY5 108 aa13.01□□□□□ -0.33
SRRT-211ENST00000478693 LENG1Q96BZ8 264 aaPredicted RBP13.01□□□□□ -0.33
SRRT-211ENST00000478693 ZFP91Q96JP5 570 aaPredicted RBP13.01□□□□□ -0.33
SRRT-211ENST00000478693 SPC25Q9HBM1 224 aa13.01□□□□□ -0.33
SRRT-211ENST00000478693 XPNPEP3Q9NQH7 507 aa13.01□□□□□ -0.33
SRRT-211ENST00000478693 MRVI1Q9Y6F6 885 aa13.01□□□□□ -0.33
SRRT-211ENST00000478693 FRMPD4Q14CM0 1322 aa13.01□□□□□ -0.33
SRRT-211ENST00000478693 DOCK3Q8IZD9 2030 aa13.01□□□□□ -0.33
SRRT-211ENST00000478693 BAZ2BQ9UIF8 2168 aaKnown RBP13.01□□□□□ -0.33
SRRT-211ENST00000478693 C11orf97A0A1B0GVM6 126 aaPredicted RBP13□□□□□ -0.33
SRRT-211ENST00000478693 EIF3JO75822 258 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms