RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 TECP42680 631 aa6.77□□□□□ -1.33
SH3D19-207ENST00000478503 FXR1P51114 621 aaKnown RBP eCLIP6.77□□□□□ -1.33
SH3D19-207ENST00000478503 GTF2A1P52655 376 aaPredicted RBP6.77□□□□□ -1.33
SH3D19-207ENST00000478503 PMS1P54277 932 aaKnown RBP6.77□□□□□ -1.33
SH3D19-207ENST00000478503 SNAP25P60880 206 aa6.77□□□□□ -1.33
SH3D19-207ENST00000478503 ETF1P62495 437 aaKnown RBP6.77□□□□□ -1.33
SH3D19-207ENST00000478503 GRAPQ13588 217 aa6.77□□□□□ -1.33
SH3D19-207ENST00000478503 C1QTNF12Q5T7M4 302 aa6.77□□□□□ -1.33
SH3D19-207ENST00000478503 IQUBQ8NA54 791 aa6.77□□□□□ -1.33
SH3D19-207ENST00000478503 GRAPLQ8TC17 118 aaPredicted RBP6.77□□□□□ -1.33
SH3D19-207ENST00000478503 HELQQ8TDG4 1101 aa6.77□□□□□ -1.33
SH3D19-207ENST00000478503 CEP95Q96GE4 821 aa6.77□□□□□ -1.33
SH3D19-207ENST00000478503 POLD4Q9HCU8 107 aa6.77□□□□□ -1.33
SH3D19-207ENST00000478503 MAD2L2Q9UI95 211 aa6.77□□□□□ -1.33
SH3D19-207ENST00000478503 BCL9LQ86UU0 1499 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 PPP1R3GB7ZBB8 358 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 DDAH1O94760 285 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 BAG3O95817 575 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 CALM1P0DP23 149 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 CALM2P0DP24 149 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 CALM3P0DP25 149 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 FOSL1P15407 271 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 RASA1P20936 1047 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 TXKP42681 527 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 CDK8P49336 464 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 RAD51AP2Q09MP3 1159 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 CCDC178Q5BJE1 867 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 REXO1L1PQ8IX06 675 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 PHC3Q8NDX5 983 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 MGARPQ8TDB4 240 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 LRRC15Q8TF66 581 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 NELFBQ8WX92 580 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 TNFRSF25Q93038 417 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 NUP88Q99567 741 aaPredicted RBP6.76□□□□□ -1.33
SH3D19-207ENST00000478503 SYNPO2Q9UMS6 1093 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 COL16A1Q07092 1604 aaPredicted RBP6.76□□□□□ -1.33
SH3D19-207ENST00000478503 TIMM44O43615 452 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 KIF20AO95235 890 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 ZNF18P17022 549 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 PRCPP42785 496 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 ATP2C1P98194 919 aaPredicted RBP6.76□□□□□ -1.33
SH3D19-207ENST00000478503 RAD9BQ6WBX8 426 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 ZNF804AQ7Z570 1209 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 SEPT12Q8IYM1 358 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 CCDC12Q8WUD4 166 aaPredicted RBP6.76□□□□□ -1.33
SH3D19-207ENST00000478503 C4AP0C0L4 1744 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 C4BP0C0L5 1744 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 FAM237AA0A1B0GTK4 181 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 SMCO2A6NFE2 343 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 G3V3G9 751 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 ORC4O43929 436 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 WASHC5Q12768 1159 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 VPS72Q15906 364 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 DCAF8Q5TAQ9 597 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 LLGL2Q6P1M3 1020 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 TRIM65Q6PJ69 517 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 DTHD1Q6ZMT9 781 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 DYMQ7RTS9 669 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 TMEM139Q8IV31 216 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 WDR66Q8TBY9 1149 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 SEZ6LQ9BYH1 1024 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.76□□□□□ -1.33
SH3D19-207ENST00000478503 GGA1Q9UJY5 639 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 PCDHA6Q9UN73 950 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 LZTS1Q9Y250 596 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 PCDHA8Q9Y5H6 950 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.76□□□□□ -1.33
SH3D19-207ENST00000478503 IKBKGQ9Y6K9 419 aa6.76□□□□□ -1.33
SH3D19-207ENST00000478503 CNTNAP4Q9C0A0 1308 aa6.75□□□□□ -1.33
SH3D19-207ENST00000478503 SSBP05455 408 aaKnown RBP eCLIP6.75□□□□□ -1.33
SH3D19-207ENST00000478503 VDRP11473 427 aa6.75□□□□□ -1.33
SH3D19-207ENST00000478503 KRT31Q15323 416 aa6.75□□□□□ -1.33
SH3D19-207ENST00000478503 MTERF4Q7Z6M4 381 aaKnown RBP6.75□□□□□ -1.33
SH3D19-207ENST00000478503 ATP6V1E2Q96A05 226 aa6.75□□□□□ -1.33
SH3D19-207ENST00000478503 CEP63Q96MT8 703 aa6.75□□□□□ -1.33
SH3D19-207ENST00000478503 FAM210AQ96ND0 272 aa6.75□□□□□ -1.33
SH3D19-207ENST00000478503 SLF1Q9BQI6 1058 aa6.75□□□□□ -1.33
SH3D19-207ENST00000478503 JADE2Q9NQC1 790 aa6.75□□□□□ -1.33
SH3D19-207ENST00000478503 TRIM10Q9UDY6 481 aa6.75□□□□□ -1.33
SH3D19-207ENST00000478503 DACH1Q9UI36 760 aa6.75□□□□□ -1.33
SH3D19-207ENST00000478503 COL14A1Q05707 1796 aaKnown RBP6.75□□□□□ -1.33
SH3D19-207ENST00000478503 AKR1B15C9JRZ8 316 aaPredicted RBP6.75□□□□□ -1.33
SH3D19-207ENST00000478503 RPN1P04843 607 aaKnown RBP6.75□□□□□ -1.33
SH3D19-207ENST00000478503 KLK7P49862 253 aa6.75□□□□□ -1.33
SH3D19-207ENST00000478503 UBXN1Q04323 297 aa6.75□□□□□ -1.33
SH3D19-207ENST00000478503 PPP2R5CQ13362 524 aa6.75□□□□□ -1.33
SH3D19-207ENST00000478503 NR1I3Q14994 352 aa6.75□□□□□ -1.33
SH3D19-207ENST00000478503 UBE2SQ16763 222 aa6.75□□□□□ -1.33
SH3D19-207ENST00000478503 SPATA1Q5VX52 437 aa6.75□□□□□ -1.33
SH3D19-207ENST00000478503 TTBK2Q6IQ55 1244 aa6.75□□□□□ -1.33
SH3D19-207ENST00000478503 NDUFAF2Q8N183 169 aa6.75□□□□□ -1.33
SH3D19-207ENST00000478503 ZNF579Q8NAF0 562 aaKnown RBP6.75□□□□□ -1.33
SH3D19-207ENST00000478503 FERMT2Q96AC1 680 aa6.75□□□□□ -1.33
SH3D19-207ENST00000478503 DDX56Q9NY93 547 aaKnown RBP6.75□□□□□ -1.33
SH3D19-207ENST00000478503 UBAP1Q9NZ09 502 aa6.75□□□□□ -1.33
SH3D19-207ENST00000478503 PCDHA4Q9UN74 947 aa6.75□□□□□ -1.33
SH3D19-207ENST00000478503 NHSL1Q5SYE7 1610 aa6.75□□□□□ -1.33
SH3D19-207ENST00000478503 PABPN1LA6NDY0 278 aaKnown RBP6.75□□□□□ -1.33
SH3D19-207ENST00000478503 FCER1AP12319 257 aa6.75□□□□□ -1.33
SH3D19-207ENST00000478503 GYS1P13807 737 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms