RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 MOCS3O95396 460 aa16.52■□□□□ 0.24
U2AF1-210ENST00000478282 PLEKP08567 350 aaPredicted RBP16.52■□□□□ 0.24
U2AF1-210ENST00000478282 FGRP09769 529 aa16.52■□□□□ 0.24
U2AF1-210ENST00000478282 VEGFAP15692 232 aaPredicted RBP16.52■□□□□ 0.24
U2AF1-210ENST00000478282 CCNE1P24864 410 aa16.52■□□□□ 0.24
U2AF1-210ENST00000478282 USP8P40818 1118 aa16.52■□□□□ 0.24
U2AF1-210ENST00000478282 MATR3P43243 847 aaKnown RBP eCLIP16.52■□□□□ 0.24
U2AF1-210ENST00000478282 MTIF2P46199 727 aaKnown RBP16.52■□□□□ 0.24
U2AF1-210ENST00000478282 SLC15A2Q16348 729 aa16.52■□□□□ 0.24
U2AF1-210ENST00000478282 SLC10A5Q5PT55 438 aa16.52■□□□□ 0.24
U2AF1-210ENST00000478282 NFRKBQ6P4R8 1299 aa16.52■□□□□ 0.24
U2AF1-210ENST00000478282 DTHD1Q6ZMT9 781 aa16.52■□□□□ 0.24
U2AF1-210ENST00000478282 B4GALNT4Q76KP1 1039 aa16.52■□□□□ 0.24
U2AF1-210ENST00000478282 CCDC91Q7Z6B0 441 aa16.52■□□□□ 0.24
U2AF1-210ENST00000478282 COL23A1Q86Y22 540 aaPredicted RBP16.52■□□□□ 0.24
U2AF1-210ENST00000478282 CNPY4Q8N129 248 aa16.52■□□□□ 0.24
U2AF1-210ENST00000478282 PP2D1A8MPX8 630 aa16.52■□□□□ 0.24
U2AF1-210ENST00000478282 ZPR1O75312 459 aa16.52■□□□□ 0.24
U2AF1-210ENST00000478282 PCP11498 1178 aaKnown RBP16.52■□□□□ 0.24
U2AF1-210ENST00000478282 CALML3P27482 149 aa16.52■□□□□ 0.24
U2AF1-210ENST00000478282 HNRNPH3P31942 346 aaKnown RBP16.52■□□□□ 0.24
U2AF1-210ENST00000478282 RFC4P35249 363 aa16.52■□□□□ 0.24
U2AF1-210ENST00000478282 MRPS25P82663 173 aaKnown RBP16.52■□□□□ 0.24
U2AF1-210ENST00000478282 ZSCAN29Q8IWY8 852 aaPredicted RBP16.52■□□□□ 0.24
U2AF1-210ENST00000478282 IQCDQ96DY2 449 aa16.52■□□□□ 0.24
U2AF1-210ENST00000478282 NOC4LQ9BVI4 516 aaKnown RBP16.52■□□□□ 0.24
U2AF1-210ENST00000478282 MYH1P12882 1939 aa16.52■□□□□ 0.23
U2AF1-210ENST00000478282 NDUFAB1O14561 156 aa16.52■□□□□ 0.23
U2AF1-210ENST00000478282 PDCLQ13371 301 aa16.52■□□□□ 0.23
U2AF1-210ENST00000478282 NNTQ13423 1086 aa16.52■□□□□ 0.23
U2AF1-210ENST00000478282 CCDC181Q5TID7 509 aa16.52■□□□□ 0.23
U2AF1-210ENST00000478282 BLIDQ8IZY5 108 aa16.52■□□□□ 0.23
U2AF1-210ENST00000478282 EEF2KMTQ96G04 330 aa16.52■□□□□ 0.23
U2AF1-210ENST00000478282 ALS2CR12Q96Q35 445 aa16.52■□□□□ 0.23
U2AF1-210ENST00000478282 RIOK1Q9BRS2 568 aaKnown RBP16.52■□□□□ 0.23
U2AF1-210ENST00000478282 PLAGL2Q9UPG8 496 aa16.52■□□□□ 0.23
U2AF1-210ENST00000478282 TNRC6CQ9HCJ0 1690 aaKnown RBP16.51■□□□□ 0.23
U2AF1-210ENST00000478282 FAM205AQ6ZU69 1335 aa16.51■□□□□ 0.23
U2AF1-210ENST00000478282 DEFB132Q7Z7B7 95 aa16.51■□□□□ 0.23
U2AF1-210ENST00000478282 UPF1Q92900 1129 aaKnown RBP eCLIP16.51■□□□□ 0.23
U2AF1-210ENST00000478282 CCSER1Q9C0I3 900 aa16.51■□□□□ 0.23
U2AF1-210ENST00000478282 UBA7P41226 1012 aa16.51■□□□□ 0.23
U2AF1-210ENST00000478282 FKBP15Q5T1M5 1219 aa16.51■□□□□ 0.23
U2AF1-210ENST00000478282 ANKRD40Q6AI12 368 aa16.51■□□□□ 0.23
U2AF1-210ENST00000478282 ZIM3Q96PE6 472 aa16.51■□□□□ 0.23
U2AF1-210ENST00000478282 BRIP1Q9BX63 1249 aa16.51■□□□□ 0.23
U2AF1-210ENST00000478282 ARHGAP20Q9P2F6 1191 aa16.51■□□□□ 0.23
U2AF1-210ENST00000478282 NIP7Q9Y221 180 aaKnown RBP eCLIP16.51■□□□□ 0.23
U2AF1-210ENST00000478282 KIF11P52732 1056 aa16.5■□□□□ 0.23
U2AF1-210ENST00000478282 TYW1BQ6NUM6 668 aa16.5■□□□□ 0.23
U2AF1-210ENST00000478282 C8orf74Q6P047 294 aa16.5■□□□□ 0.23
U2AF1-210ENST00000478282 PRPF38AQ8NAV1 312 aaKnown RBP16.5■□□□□ 0.23
U2AF1-210ENST00000478282 SMARCAL1Q9NZC9 954 aa16.5■□□□□ 0.23
U2AF1-210ENST00000478282 ABCF2Q9UG63 623 aa16.5■□□□□ 0.23
U2AF1-210ENST00000478282 LCA5LO95447 670 aa16.5■□□□□ 0.23
U2AF1-210ENST00000478282 PAFAH1B1P43034 410 aa16.5■□□□□ 0.23
U2AF1-210ENST00000478282 MNAT1P51948 309 aa16.5■□□□□ 0.23
U2AF1-210ENST00000478282 SPATS2Q86XZ4 545 aaKnown RBP16.5■□□□□ 0.23
U2AF1-210ENST00000478282 PLIN2Q99541 437 aa16.5■□□□□ 0.23
U2AF1-210ENST00000478282 CACNA1SQ13698 1873 aa16.5■□□□□ 0.23
U2AF1-210ENST00000478282 CXCR5P32302 372 aa16.5■□□□□ 0.23
U2AF1-210ENST00000478282 EHD2Q9NZN4 543 aa16.5■□□□□ 0.23
U2AF1-210ENST00000478282 ZEB2O60315 1214 aa16.49■□□□□ 0.23
U2AF1-210ENST00000478282 GLE1Q53GS7 698 aaKnown RBP16.49■□□□□ 0.23
U2AF1-210ENST00000478282 C2CD5Q86YS7 1000 aa16.49■□□□□ 0.23
U2AF1-210ENST00000478282 ANKRD31Q8N7Z5 1873 aa16.49■□□□□ 0.23
U2AF1-210ENST00000478282 LRRC15Q8TF66 581 aa16.49■□□□□ 0.23
U2AF1-210ENST00000478282 PSMB7Q99436 277 aa16.49■□□□□ 0.23
U2AF1-210ENST00000478282 TMEM60Q9H2L4 133 aa16.49■□□□□ 0.23
U2AF1-210ENST00000478282 LOC102724159A0A0B4J2E5 919 aa16.49■□□□□ 0.23
U2AF1-210ENST00000478282 KIAA0754O94854 1291 aa16.49■□□□□ 0.23
U2AF1-210ENST00000478282 PWP2Q15269 919 aaKnown RBP16.49■□□□□ 0.23
U2AF1-210ENST00000478282 SH2D3CQ8N5H7 860 aa16.49■□□□□ 0.23
U2AF1-210ENST00000478282 CCDC47Q96A33 483 aaKnown RBP16.49■□□□□ 0.23
U2AF1-210ENST00000478282 MAGEF1Q9HAY2 307 aa16.49■□□□□ 0.23
U2AF1-210ENST00000478282 PCDHA4Q9UN74 947 aa16.49■□□□□ 0.23
U2AF1-210ENST00000478282 A0A1B0GUL6 1792 aa16.49■□□□□ 0.23
U2AF1-210ENST00000478282 EIF4A3P38919 411 aaKnown RBP16.48■□□□□ 0.23
U2AF1-210ENST00000478282 GSCP56915 257 aaPredicted RBP16.48■□□□□ 0.23
U2AF1-210ENST00000478282 DYNLL1P63167 89 aaKnown RBP16.48■□□□□ 0.23
U2AF1-210ENST00000478282 APBA1Q02410 837 aa16.48■□□□□ 0.23
U2AF1-210ENST00000478282 PDE4DQ08499 809 aa16.48■□□□□ 0.23
U2AF1-210ENST00000478282 NFIXQ14938 502 aa16.48■□□□□ 0.23
U2AF1-210ENST00000478282 KDM7AQ6ZMT4 941 aa16.48■□□□□ 0.23
U2AF1-210ENST00000478282 CUEDC2Q9H467 287 aa16.48■□□□□ 0.23
U2AF1-210ENST00000478282 RBM12Q9NTZ6 932 aaKnown RBP16.48■□□□□ 0.23
U2AF1-210ENST00000478282 TFCP2L1Q9NZI6 479 aa16.48■□□□□ 0.23
U2AF1-210ENST00000478282 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.48■□□□□ 0.23
U2AF1-210ENST00000478282 CAPN7Q9Y6W3 813 aa16.48■□□□□ 0.23
U2AF1-210ENST00000478282 NMT2O60551 498 aa16.48■□□□□ 0.23
U2AF1-210ENST00000478282 PPP1R2P41236 205 aa16.48■□□□□ 0.23
U2AF1-210ENST00000478282 FNTAP49354 379 aa16.48■□□□□ 0.23
U2AF1-210ENST00000478282 CCDC155Q8N6L0 562 aa16.48■□□□□ 0.23
U2AF1-210ENST00000478282 RASGRP4Q8TDF6 673 aa16.48■□□□□ 0.23
U2AF1-210ENST00000478282 MEFVO15553 781 aaPredicted RBP16.48■□□□□ 0.23
U2AF1-210ENST00000478282 FSBPO95073 299 aa16.48■□□□□ 0.23
U2AF1-210ENST00000478282 ATP1A2P50993 1020 aa16.48■□□□□ 0.23
U2AF1-210ENST00000478282 CCDC178Q5BJE1 867 aa16.48■□□□□ 0.23
U2AF1-210ENST00000478282 OTUD6BQ8N6M0 293 aa16.48■□□□□ 0.23
U2AF1-210ENST00000478282 PAGR1Q9BTK6 254 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms