RNA–Protein interactions for RNA: ENST00000477692.6

EXOSC1-209, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 480 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-209ENST00000477692 RMDN3Q96TC7 470 aa15.16■□□□□ 0.02
EXOSC1-209ENST00000477692 C6orf50Q9HD87 102 aa15.16■□□□□ 0.02
EXOSC1-209ENST00000477692 PXMP2Q9NR77 195 aa15.16■□□□□ 0.02
EXOSC1-209ENST00000477692 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.16■□□□□ 0.02
EXOSC1-209ENST00000477692 NRBP1Q9UHY1 535 aa15.16■□□□□ 0.02
EXOSC1-209ENST00000477692 DDX49Q9Y6V7 483 aaKnown RBP15.16■□□□□ 0.02
EXOSC1-209ENST00000477692 FRMPD4Q14CM0 1322 aa15.16■□□□□ 0.02
EXOSC1-209ENST00000477692 CYBAP13498 195 aa15.15■□□□□ 0.02
EXOSC1-209ENST00000477692 GNA11P29992 359 aa15.15■□□□□ 0.02
EXOSC1-209ENST00000477692 CLK2P49760 499 aaKnown RBP15.15■□□□□ 0.02
EXOSC1-209ENST00000477692 HMGN5P82970 282 aaKnown RBP15.15■□□□□ 0.02
EXOSC1-209ENST00000477692 MTFR1Q15390 333 aa15.15■□□□□ 0.02
EXOSC1-209ENST00000477692 ARHGEF16Q5VV41 709 aa15.15■□□□□ 0.02
EXOSC1-209ENST00000477692 TRPV1Q8NER1 839 aa15.15■□□□□ 0.02
EXOSC1-209ENST00000477692 ABHD8Q96I13 439 aa15.15■□□□□ 0.02
EXOSC1-209ENST00000477692 IWS1Q96ST2 819 aa15.15■□□□□ 0.02
EXOSC1-209ENST00000477692 MPHOSPH6Q99547 160 aaKnown RBP15.15■□□□□ 0.02
EXOSC1-209ENST00000477692 ALG1Q9BT22 464 aa15.15■□□□□ 0.02
EXOSC1-209ENST00000477692 KATNBL1Q9H079 304 aa15.15■□□□□ 0.02
EXOSC1-209ENST00000477692 RPTORQ8N122 1335 aa15.15■□□□□ 0.02
EXOSC1-209ENST00000477692 KIAA1217Q5T5P2 1943 aa15.14■□□□□ 0.01
EXOSC1-209ENST00000477692 B4DLN1 442 aa15.14■□□□□ 0.01
EXOSC1-209ENST00000477692 ADAMTS3O15072 1205 aa15.14■□□□□ 0.01
EXOSC1-209ENST00000477692 ZNF865P0CJ78 1059 aaPredicted RBP15.14■□□□□ 0.01
EXOSC1-209ENST00000477692 CCL5P13501 91 aa15.14■□□□□ 0.01
EXOSC1-209ENST00000477692 EIF2AK2P19525 551 aaKnown RBP15.14■□□□□ 0.01
EXOSC1-209ENST00000477692 CCND3P30281 292 aaPredicted RBP15.14■□□□□ 0.01
EXOSC1-209ENST00000477692 CUL4AQ13619 759 aa15.14■□□□□ 0.01
EXOSC1-209ENST00000477692 PRAMEF19Q5SWL8 479 aa15.14■□□□□ 0.01
EXOSC1-209ENST00000477692 PDCD2LQ9BRP1 358 aa15.14■□□□□ 0.01
EXOSC1-209ENST00000477692 UNC93B1Q9H1C4 597 aa15.14■□□□□ 0.01
EXOSC1-209ENST00000477692 ABHD16BQ9H3Z7 469 aa15.14■□□□□ 0.01
EXOSC1-209ENST00000477692 HMX1Q9NP08 348 aaPredicted RBP15.14■□□□□ 0.01
EXOSC1-209ENST00000477692 CNPY2Q9Y2B0 182 aa15.14■□□□□ 0.01
EXOSC1-209ENST00000477692 FRMPD3Q5JV73 1810 aa15.14■□□□□ 0.01
EXOSC1-209ENST00000477692 CENPFP49454 3210 aa15.14■□□□□ 0.01
EXOSC1-209ENST00000477692 SPDYE3A6NKU9 549 aa15.13■□□□□ 0.01
EXOSC1-209ENST00000477692 K7ELQ4 463 aaPredicted RBP15.13■□□□□ 0.01
EXOSC1-209ENST00000477692 MYCP01106 439 aaPredicted RBP15.13■□□□□ 0.01
EXOSC1-209ENST00000477692 XBP1P17861 261 aa15.13■□□□□ 0.01
EXOSC1-209ENST00000477692 NLRP5P59047 1200 aa15.13■□□□□ 0.01
EXOSC1-209ENST00000477692 PDE4DQ08499 809 aa15.13■□□□□ 0.01
EXOSC1-209ENST00000477692 ACVR2BQ13705 512 aa15.13■□□□□ 0.01
EXOSC1-209ENST00000477692 PGM5Q15124 567 aa15.13■□□□□ 0.01
EXOSC1-209ENST00000477692 DAGLBQ8NCG7 672 aa15.13■□□□□ 0.01
EXOSC1-209ENST00000477692 BICD2Q8TD16 824 aa15.13■□□□□ 0.01
EXOSC1-209ENST00000477692 PHF20Q9BVI0 1012 aa15.13■□□□□ 0.01
EXOSC1-209ENST00000477692 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.13■□□□□ 0.01
EXOSC1-209ENST00000477692 GJB4Q9NTQ9 266 aa15.13■□□□□ 0.01
EXOSC1-209ENST00000477692 TMEM260Q9NX78 707 aa15.13■□□□□ 0.01
EXOSC1-209ENST00000477692 PCDHA6Q9UN73 950 aa15.13■□□□□ 0.01
EXOSC1-209ENST00000477692 PCDHA4Q9UN74 947 aa15.13■□□□□ 0.01
EXOSC1-209ENST00000477692 KCNJ14Q9UNX9 436 aa15.13■□□□□ 0.01
EXOSC1-209ENST00000477692 PCDHA8Q9Y5H6 950 aa15.13■□□□□ 0.01
EXOSC1-209ENST00000477692 FOSP01100 380 aaPredicted RBP15.12■□□□□ 0.01
EXOSC1-209ENST00000477692 NR3C2P08235 984 aa15.12■□□□□ 0.01
EXOSC1-209ENST00000477692 AP3B2Q13367 1082 aa15.12■□□□□ 0.01
EXOSC1-209ENST00000477692 NPY5RQ15761 445 aa15.12■□□□□ 0.01
EXOSC1-209ENST00000477692 JAKMIP3Q5VZ66 844 aa15.12■□□□□ 0.01
EXOSC1-209ENST00000477692 GALNT17Q6IS24 598 aa15.12■□□□□ 0.01
EXOSC1-209ENST00000477692 VSIG10LQ86VR7 867 aa15.12■□□□□ 0.01
EXOSC1-209ENST00000477692 REXO1Q8N1G1 1221 aaKnown RBP15.12■□□□□ 0.01
EXOSC1-209ENST00000477692 IL31RAQ8NI17 732 aa15.12■□□□□ 0.01
EXOSC1-209ENST00000477692 ANO3Q9BYT9 981 aa15.12■□□□□ 0.01
EXOSC1-209ENST00000477692 RNF208Q9H0X6 261 aa15.12■□□□□ 0.01
EXOSC1-209ENST00000477692 VTA1Q9NP79 307 aa15.12■□□□□ 0.01
EXOSC1-209ENST00000477692 PAK6Q9NQU5 681 aaPredicted RBP15.12■□□□□ 0.01
EXOSC1-209ENST00000477692 ZHX1Q9UKY1 873 aaPredicted RBP15.12■□□□□ 0.01
EXOSC1-209ENST00000477692 M0R2N6 131 aa15.11■□□□□ 0.01
EXOSC1-209ENST00000477692 SEPT4O43236 478 aa15.11■□□□□ 0.01
EXOSC1-209ENST00000477692 MYCLP12524 364 aaPredicted RBP15.11■□□□□ 0.01
EXOSC1-209ENST00000477692 STXBP2Q15833 593 aa15.11■□□□□ 0.01
EXOSC1-209ENST00000477692 MCTP2Q6DN12 878 aa15.11■□□□□ 0.01
EXOSC1-209ENST00000477692 TAPT1Q6NXT6 567 aa15.11■□□□□ 0.01
EXOSC1-209ENST00000477692 HSCBQ8IWL3 235 aa15.11■□□□□ 0.01
EXOSC1-209ENST00000477692 FBXO16Q8IX29 292 aaPredicted RBP15.11■□□□□ 0.01
EXOSC1-209ENST00000477692 BLIDQ8IZY5 108 aa15.11■□□□□ 0.01
EXOSC1-209ENST00000477692 FAM184AQ8NB25 1140 aa15.11■□□□□ 0.01
EXOSC1-209ENST00000477692 PGBD1Q96JS3 809 aa15.11■□□□□ 0.01
EXOSC1-209ENST00000477692 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.11■□□□□ 0.01
EXOSC1-209ENST00000477692 MYH7BA7E2Y1 1941 aa15.1■□□□□ 0.01
EXOSC1-209ENST00000477692 RBM47A0AV96 593 aaKnown RBP15.1■□□□□ 0.01
EXOSC1-209ENST00000477692 EIF3JO75822 258 aaKnown RBP15.1■□□□□ 0.01
EXOSC1-209ENST00000477692 CNGA1P29973 690 aa15.1■□□□□ 0.01
EXOSC1-209ENST00000477692 CCND2P30279 289 aa15.1■□□□□ 0.01
EXOSC1-209ENST00000477692 MRPS9P82933 396 aaKnown RBP15.1■□□□□ 0.01
EXOSC1-209ENST00000477692 CCDC144BQ3MJ40 725 aa15.1■□□□□ 0.01
EXOSC1-209ENST00000477692 PCNX4Q63HM2 1172 aa15.1■□□□□ 0.01
EXOSC1-209ENST00000477692 XRRA1Q6P2D8 792 aa15.1■□□□□ 0.01
EXOSC1-209ENST00000477692 EEPD1Q7L9B9 569 aa15.1■□□□□ 0.01
EXOSC1-209ENST00000477692 RASGRP4Q8TDF6 673 aa15.1■□□□□ 0.01
EXOSC1-209ENST00000477692 EHMT1Q9H9B1 1298 aa15.1■□□□□ 0.01
EXOSC1-209ENST00000477692 PDGFCQ9NRA1 345 aa15.1■□□□□ 0.01
EXOSC1-209ENST00000477692 DDX20Q9UHI6 824 aaKnown RBP15.1■□□□□ 0.01
EXOSC1-209ENST00000477692 SMC3Q9UQE7 1217 aa15.1■□□□□ 0.01
EXOSC1-209ENST00000477692 MMP1P03956 469 aa15.09■□□□□ 0.01
EXOSC1-209ENST00000477692 GJB1P08034 283 aa15.09■□□□□ 0.01
EXOSC1-209ENST00000477692 AKR1A1P14550 325 aa15.09■□□□□ 0.01
EXOSC1-209ENST00000477692 GJB2P29033 226 aa15.09■□□□□ 0.01
EXOSC1-209ENST00000477692 SREBF1P36956 1147 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms