RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 MFAP1P55081 439 aaKnown RBP8.65□□□□□ -1.02
BRCA1-214ENST00000477152 C1orf53Q5VUE5 145 aa8.65□□□□□ -1.02
BRCA1-214ENST00000477152 SLC39A5Q6ZMH5 540 aa8.65□□□□□ -1.02
BRCA1-214ENST00000477152 RIOX2Q8IUF8 465 aa8.65□□□□□ -1.02
BRCA1-214ENST00000477152 ZNF444Q8N0Y2 327 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-214ENST00000477152 MKNK1Q9BUB5 465 aa8.65□□□□□ -1.02
BRCA1-214ENST00000477152 NACAP1Q9BZK3 213 aa8.65□□□□□ -1.02
BRCA1-214ENST00000477152 SPC25Q9HBM1 224 aa8.65□□□□□ -1.02
BRCA1-214ENST00000477152 ETNK1Q9HBU6 452 aa8.65□□□□□ -1.02
BRCA1-214ENST00000477152 FLRT1Q9NZU1 646 aa8.65□□□□□ -1.02
BRCA1-214ENST00000477152 SYNPO2Q9UMS6 1093 aa8.65□□□□□ -1.02
BRCA1-214ENST00000477152 PLXNA1Q9UIW2 1896 aa8.65□□□□□ -1.03
BRCA1-214ENST00000477152 A0A1W2PRG0 241 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 TNFRSF10AO00220 468 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 ZBED4O75132 1171 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 EEF2P13639 858 aaKnown RBP8.64□□□□□ -1.03
BRCA1-214ENST00000477152 AKR1A1P14550 325 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 AKR1B1P15121 316 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 SBK1Q52WX2 424 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 GJC2Q5T442 439 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-214ENST00000477152 SPICE1Q8N0Z3 855 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 NUP133Q8WUM0 1156 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 ATG4CQ96DT6 458 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 DDX11Q96FC9 970 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 DYNLL2Q96FJ2 89 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 MAML3Q96JK9 1138 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 XPNPEP3Q9NQH7 507 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 PRDM5Q9NQX1 630 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-214ENST00000477152 ECHDC1Q9NTX5 307 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 FBXO40Q9UH90 709 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 RCAN3Q9UKA8 241 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 PPP1R9AQ9ULJ8 1098 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 TACC3Q9Y6A5 838 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 J3QL48 77 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 GDF10P55107 478 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 CBLBQ13191 982 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 NR5A1Q13285 461 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 ZNF598Q86UK7 904 aaKnown RBP8.64□□□□□ -1.03
BRCA1-214ENST00000477152 PRPF38AQ8NAV1 312 aaKnown RBP8.64□□□□□ -1.03
BRCA1-214ENST00000477152 SLF1Q9BQI6 1058 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 TINF2Q9BSI4 451 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 TSEN34Q9BSV6 310 aaKnown RBP8.64□□□□□ -1.03
BRCA1-214ENST00000477152 TEX13BQ9BXU2 312 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 MTMR10Q9NXD2 777 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 NYAP2Q9P242 653 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 MTMR7Q9Y216 660 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 RLFQ13129 1914 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 COL11A1P12107 1806 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-214ENST00000477152 PARP14Q460N5 1801 aa8.64□□□□□ -1.03
BRCA1-214ENST00000477152 MROH7Q68CQ1 1323 aa8.63□□□□□ -1.03
BRCA1-214ENST00000477152 VWA5AO00534 786 aa8.63□□□□□ -1.03
BRCA1-214ENST00000477152 ERC2O15083 957 aa8.63□□□□□ -1.03
BRCA1-214ENST00000477152 APPP05067 770 aa8.63□□□□□ -1.03
BRCA1-214ENST00000477152 CYP2D6P10635 497 aa8.63□□□□□ -1.03
BRCA1-214ENST00000477152 PDE4BQ07343 736 aa8.63□□□□□ -1.03
BRCA1-214ENST00000477152 NNTQ13423 1086 aa8.63□□□□□ -1.03
BRCA1-214ENST00000477152 TBCELQ5QJ74 424 aa8.63□□□□□ -1.03
BRCA1-214ENST00000477152 SLC44A5Q8NCS7 719 aa8.63□□□□□ -1.03
BRCA1-214ENST00000477152 FAM184BQ9ULE4 1060 aa8.63□□□□□ -1.03
BRCA1-214ENST00000477152 ADAMTS5Q9UNA0 930 aa8.63□□□□□ -1.03
BRCA1-214ENST00000477152 GNEQ9Y223 722 aaKnown RBP8.63□□□□□ -1.03
BRCA1-214ENST00000477152 DCDC2CA8MYV0 355 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 MINDY4BA8MYZ0 360 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 COBLO75128 1261 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 ADCYAP1R1P41586 468 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 TDO2P48775 406 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 DHX9Q08211 1270 aaKnown RBP8.62□□□□□ -1.03
BRCA1-214ENST00000477152 TMEM132BQ14DG7 1078 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 SNX17Q15036 470 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 LRRC41Q15345 812 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 CTR9Q6PD62 1173 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 PCSK9Q8NBP7 692 aaKnown RBP8.62□□□□□ -1.03
BRCA1-214ENST00000477152 APPBP2Q92624 585 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 ANO2Q9NQ90 1003 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 CXXC1Q9P0U4 656 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-214ENST00000477152 FEM1BQ9UK73 627 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 PHF24Q9UPV7 400 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 SYNGAP1Q96PV0 1343 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 ROBO3Q96MS0 1386 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 MYH4Q9Y623 1939 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 TMEM265A0A087WTH1 108 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 PRKAB2O43741 272 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 IGHA2P01877 340 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 CLTBP09497 229 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 RAG1P15918 1043 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 OAZ1P54368 228 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 SMAD3P84022 425 aaKnown RBP8.62□□□□□ -1.03
BRCA1-214ENST00000477152 FAM83BQ5T0W9 1011 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 KBTBD3Q8NAB2 608 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 KDF1Q8NAX2 398 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-214ENST00000477152 TRPV1Q8NER1 839 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 CHST13Q8NET6 341 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 ITPKCQ96DU7 683 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 SEZ6LQ9BYH1 1024 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 SEPT3Q9UH03 358 aa8.62□□□□□ -1.03
BRCA1-214ENST00000477152 MKI67P46013 3256 aaKnown RBP8.62□□□□□ -1.03
BRCA1-214ENST00000477152 F5H6K3 240 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 ATP2A1O14983 1001 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 TLR3O15455 904 aaKnown RBP8.61□□□□□ -1.03
BRCA1-214ENST00000477152 RNF113AO15541 343 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms