RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 CCPG1Q9ULG6 757 aa20.28■□□□□ 0.84
SREBF1-211ENST00000476994 PCDHA1Q9Y5I3 950 aa20.28■□□□□ 0.84
SREBF1-211ENST00000476994 ABCB11O95342 1321 aa20.27■□□□□ 0.84
SREBF1-211ENST00000476994 CYP2C19P33261 490 aa20.27■□□□□ 0.84
SREBF1-211ENST00000476994 STAT3P40763 770 aa20.27■□□□□ 0.84
SREBF1-211ENST00000476994 GHRHRQ02643 423 aa20.27■□□□□ 0.84
SREBF1-211ENST00000476994 OLFML2BQ68BL8 750 aa20.27■□□□□ 0.84
SREBF1-211ENST00000476994 KRT40Q6A162 431 aa20.27■□□□□ 0.84
SREBF1-211ENST00000476994 SNRNP48Q6IEG0 339 aaKnown RBP20.27■□□□□ 0.84
SREBF1-211ENST00000476994 ARRDC4Q8NCT1 418 aa20.27■□□□□ 0.84
SREBF1-211ENST00000476994 NPLOC4Q8TAT6 608 aa20.27■□□□□ 0.84
SREBF1-211ENST00000476994 C8orf76Q96K31 380 aa20.27■□□□□ 0.84
SREBF1-211ENST00000476994 UBE2OQ9C0C9 1292 aaKnown RBP20.27■□□□□ 0.84
SREBF1-211ENST00000476994 SENP6Q9GZR1 1112 aaPredicted RBP20.27■□□□□ 0.84
SREBF1-211ENST00000476994 ZMYND12Q9H0C1 365 aa20.27■□□□□ 0.84
SREBF1-211ENST00000476994 PNMA2Q9UL42 364 aa20.27■□□□□ 0.84
SREBF1-211ENST00000476994 KCNJ14Q9UNX9 436 aa20.27■□□□□ 0.84
SREBF1-211ENST00000476994 KIF3AQ9Y496 699 aa20.27■□□□□ 0.84
SREBF1-211ENST00000476994 SLC25A27O95847 323 aa20.26■□□□□ 0.83
SREBF1-211ENST00000476994 FCER1AP12319 257 aa20.26■□□□□ 0.83
SREBF1-211ENST00000476994 MAGEA10P43363 369 aaPredicted RBP20.26■□□□□ 0.83
SREBF1-211ENST00000476994 FOSBP53539 338 aa20.26■□□□□ 0.83
SREBF1-211ENST00000476994 NAPAP54920 295 aa20.26■□□□□ 0.83
SREBF1-211ENST00000476994 PKP1Q13835 747 aa20.26■□□□□ 0.83
SREBF1-211ENST00000476994 MUM1L1Q5H9M0 696 aa20.26■□□□□ 0.83
SREBF1-211ENST00000476994 LARP1BQ659C4 914 aaKnown RBP20.26■□□□□ 0.83
SREBF1-211ENST00000476994 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.26■□□□□ 0.83
SREBF1-211ENST00000476994 ABRAQ8N0Z2 381 aa20.26■□□□□ 0.83
SREBF1-211ENST00000476994 PRKAG2Q9UGJ0 569 aa20.26■□□□□ 0.83
SREBF1-211ENST00000476994 MTMR6Q9Y217 621 aa20.26■□□□□ 0.83
SREBF1-211ENST00000476994 MCM3APO60318 1980 aa20.25■□□□□ 0.83
SREBF1-211ENST00000476994 M0R2N6 131 aa20.25■□□□□ 0.83
SREBF1-211ENST00000476994 DNM1LO00429 736 aa20.25■□□□□ 0.83
SREBF1-211ENST00000476994 MMP1P03956 469 aa20.25■□□□□ 0.83
SREBF1-211ENST00000476994 ALAS1P13196 640 aa20.25■□□□□ 0.83
SREBF1-211ENST00000476994 PDCP20941 246 aa20.25■□□□□ 0.83
SREBF1-211ENST00000476994 GUCY1B3Q02153 619 aa20.25■□□□□ 0.83
SREBF1-211ENST00000476994 TRAF1Q13077 416 aa20.25■□□□□ 0.83
SREBF1-211ENST00000476994 TKFCQ3LXA3 575 aa20.25■□□□□ 0.83
SREBF1-211ENST00000476994 TDHQ8IZJ6 230 aa20.25■□□□□ 0.83
SREBF1-211ENST00000476994 DAGLBQ8NCG7 672 aa20.25■□□□□ 0.83
SREBF1-211ENST00000476994 CCDC148Q8NFR7 591 aa20.25■□□□□ 0.83
SREBF1-211ENST00000476994 LBHD1Q9BQE6 289 aaPredicted RBP20.25■□□□□ 0.83
SREBF1-211ENST00000476994 LRRC37A2A6NM11 1700 aa20.24■□□□□ 0.83
SREBF1-211ENST00000476994 KBTBD13C9JR72 458 aa20.24■□□□□ 0.83
SREBF1-211ENST00000476994 NFIBO00712 420 aa20.24■□□□□ 0.83
SREBF1-211ENST00000476994 CYBAP13498 195 aa20.24■□□□□ 0.83
SREBF1-211ENST00000476994 COPB2P35606 906 aa20.24■□□□□ 0.83
SREBF1-211ENST00000476994 LRRC26Q2I0M4 334 aa20.24■□□□□ 0.83
SREBF1-211ENST00000476994 TNFRSF25Q93038 417 aa20.24■□□□□ 0.83
SREBF1-211ENST00000476994 TRERF1Q96PN7 1200 aa20.24■□□□□ 0.83
SREBF1-211ENST00000476994 RIC8AQ9NPQ8 531 aa20.24■□□□□ 0.83
SREBF1-211ENST00000476994 RNF146Q9NTX7 359 aa20.24■□□□□ 0.83
SREBF1-211ENST00000476994 ZDHHC9Q9Y397 364 aa20.24■□□□□ 0.83
SREBF1-211ENST00000476994 MRPL11Q9Y3B7 192 aaKnown RBP20.24■□□□□ 0.83
SREBF1-211ENST00000476994 CTDP1Q9Y5B0 961 aaPredicted RBP20.24■□□□□ 0.83
SREBF1-211ENST00000476994 SMCO2A6NFE2 343 aa20.23■□□□□ 0.83
SREBF1-211ENST00000476994 STX6O43752 255 aa20.23■□□□□ 0.83
SREBF1-211ENST00000476994 CLK2P49760 499 aaKnown RBP20.23■□□□□ 0.83
SREBF1-211ENST00000476994 GPR153Q6NV75 609 aa20.23■□□□□ 0.83
SREBF1-211ENST00000476994 OXER1Q8TDS5 423 aa20.23■□□□□ 0.83
SREBF1-211ENST00000476994 CCDC12Q8WUD4 166 aaPredicted RBP20.23■□□□□ 0.83
SREBF1-211ENST00000476994 TBC1D5Q92609 795 aa20.23■□□□□ 0.83
SREBF1-211ENST00000476994 MEIS2O14770 477 aa20.22■□□□□ 0.83
SREBF1-211ENST00000476994 SEPT4O43236 478 aa20.22■□□□□ 0.83
SREBF1-211ENST00000476994 MYCNP04198 464 aaPredicted RBP20.22■□□□□ 0.83
SREBF1-211ENST00000476994 XBP1P17861 261 aa20.22■□□□□ 0.83
SREBF1-211ENST00000476994 NLRP5P59047 1200 aa20.22■□□□□ 0.83
SREBF1-211ENST00000476994 KCTD2Q14681 263 aa20.22■□□□□ 0.83
SREBF1-211ENST00000476994 GALNT17Q6IS24 598 aa20.22■□□□□ 0.83
SREBF1-211ENST00000476994 CHST13Q8NET6 341 aa20.22■□□□□ 0.83
SREBF1-211ENST00000476994 LRCH3Q96II8 777 aa20.22■□□□□ 0.83
SREBF1-211ENST00000476994 MMP19Q99542 508 aa20.22■□□□□ 0.83
SREBF1-211ENST00000476994 HOMER2Q9NSB8 354 aa20.22■□□□□ 0.83
SREBF1-211ENST00000476994 DAXXQ9UER7 740 aaPredicted RBP20.22■□□□□ 0.83
SREBF1-211ENST00000476994 PCDHA4Q9UN74 947 aa20.22■□□□□ 0.83
SREBF1-211ENST00000476994 LAMA3Q16787 3333 aa20.22■□□□□ 0.83
SREBF1-211ENST00000476994 DNAH12Q6ZR08 3092 aa20.21■□□□□ 0.83
SREBF1-211ENST00000476994 KIF28PB7ZC32 967 aa20.21■□□□□ 0.83
SREBF1-211ENST00000476994 PIK3CDO00329 1044 aa20.21■□□□□ 0.83
SREBF1-211ENST00000476994 SOX1O00570 391 aaPredicted RBP20.21■□□□□ 0.83
SREBF1-211ENST00000476994 COBLO75128 1261 aa20.21■□□□□ 0.83
SREBF1-211ENST00000476994 BRD1O95696 1058 aa20.21■□□□□ 0.83
SREBF1-211ENST00000476994 HSD17B4P51659 736 aa20.21■□□□□ 0.83
SREBF1-211ENST00000476994 ADCY7P51828 1080 aa20.21■□□□□ 0.83
SREBF1-211ENST00000476994 LRIT3Q3SXY7 679 aa20.21■□□□□ 0.83
SREBF1-211ENST00000476994 TEX2Q8IWB9 1127 aa20.21■□□□□ 0.83
SREBF1-211ENST00000476994 MAF1Q9H063 256 aa20.21■□□□□ 0.83
SREBF1-211ENST00000476994 ACAD9Q9H845 621 aa20.21■□□□□ 0.83
SREBF1-211ENST00000476994 CIZ1Q9ULV3 898 aaPredicted RBP20.21■□□□□ 0.83
SREBF1-211ENST00000476994 KIAA1217Q5T5P2 1943 aa20.2■□□□□ 0.82
SREBF1-211ENST00000476994 CALML3P27482 149 aa20.2■□□□□ 0.82
SREBF1-211ENST00000476994 ATN1P54259 1190 aaPredicted RBP20.2■□□□□ 0.82
SREBF1-211ENST00000476994 TRIM29Q14134 588 aa20.2■□□□□ 0.82
SREBF1-211ENST00000476994 GJC2Q5T442 439 aaPredicted RBP20.2■□□□□ 0.82
SREBF1-211ENST00000476994 DIS3L2Q8IYB7 885 aaKnown RBP20.2■□□□□ 0.82
SREBF1-211ENST00000476994 BLIDQ8IZY5 108 aa20.2■□□□□ 0.82
SREBF1-211ENST00000476994 TRPV1Q8NER1 839 aa20.2■□□□□ 0.82
SREBF1-211ENST00000476994 CUL5Q93034 780 aa20.2■□□□□ 0.82
SREBF1-211ENST00000476994 MAML3Q96JK9 1138 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms