RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 IFNAR1P17181 557 aa24.18■■□□□ 1.46
MAP1LC3A-204ENST00000476428 USP17L6PQ6QN14 398 aa24.18■■□□□ 1.46
MAP1LC3A-204ENST00000476428 FCHSD1Q86WN1 690 aa24.18■■□□□ 1.46
MAP1LC3A-204ENST00000476428 PAWRQ96IZ0 340 aaKnown RBP24.18■■□□□ 1.46
MAP1LC3A-204ENST00000476428 IWS1Q96ST2 819 aa24.18■■□□□ 1.46
MAP1LC3A-204ENST00000476428 PSTPIP2Q9H939 334 aa24.18■■□□□ 1.46
MAP1LC3A-204ENST00000476428 PXMP2Q9NR77 195 aa24.18■■□□□ 1.46
MAP1LC3A-204ENST00000476428 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.17■■□□□ 1.46
MAP1LC3A-204ENST00000476428 MEIS2O14770 477 aa24.17■■□□□ 1.46
MAP1LC3A-204ENST00000476428 EIF2AK2P19525 551 aaKnown RBP24.17■■□□□ 1.46
MAP1LC3A-204ENST00000476428 ADCYAP1R1P41586 468 aa24.17■■□□□ 1.46
MAP1LC3A-204ENST00000476428 TYW1BQ6NUM6 668 aa24.17■■□□□ 1.46
MAP1LC3A-204ENST00000476428 ARRDC4Q8NCT1 418 aa24.17■■□□□ 1.46
MAP1LC3A-204ENST00000476428 XPNPEP3Q9NQH7 507 aa24.17■■□□□ 1.46
MAP1LC3A-204ENST00000476428 STXBP3O00186 592 aa24.16■■□□□ 1.46
MAP1LC3A-204ENST00000476428 PIK3CDO00329 1044 aa24.16■■□□□ 1.46
MAP1LC3A-204ENST00000476428 PFKFB2O60825 505 aa24.16■■□□□ 1.46
MAP1LC3A-204ENST00000476428 DUSP11O75319 330 aaKnown RBP24.16■■□□□ 1.46
MAP1LC3A-204ENST00000476428 NR3C2P08235 984 aa24.16■■□□□ 1.46
MAP1LC3A-204ENST00000476428 TNFAIP2Q03169 654 aa24.16■■□□□ 1.46
MAP1LC3A-204ENST00000476428 PKN1Q16512 942 aa24.16■■□□□ 1.46
MAP1LC3A-204ENST00000476428 PFKFB3Q16875 520 aaPredicted RBP24.16■■□□□ 1.46
MAP1LC3A-204ENST00000476428 GJC2Q5T442 439 aaPredicted RBP24.16■■□□□ 1.46
MAP1LC3A-204ENST00000476428 IQSEC1Q6DN90 963 aa24.16■■□□□ 1.46
MAP1LC3A-204ENST00000476428 NOL8Q76FK4 1167 aaKnown RBP24.16■■□□□ 1.46
MAP1LC3A-204ENST00000476428 SMARCC2Q8TAQ2 1214 aa24.16■■□□□ 1.46
MAP1LC3A-204ENST00000476428 CUL5Q93034 780 aa24.16■■□□□ 1.46
MAP1LC3A-204ENST00000476428 SLC26A6Q9BXS9 759 aa24.16■■□□□ 1.46
MAP1LC3A-204ENST00000476428 SLKQ9H2G2 1235 aaPredicted RBP24.16■■□□□ 1.46
MAP1LC3A-204ENST00000476428 BARHL2Q9NY43 387 aa24.16■■□□□ 1.46
MAP1LC3A-204ENST00000476428 COLQQ9Y215 455 aaPredicted RBP24.16■■□□□ 1.46
MAP1LC3A-204ENST00000476428 LCTP09848 1927 aa24.16■■□□□ 1.46
MAP1LC3A-204ENST00000476428 hCG_1984214I3L0E3 225 aa24.15■■□□□ 1.46
MAP1LC3A-204ENST00000476428 CPLX1O14810 134 aa24.15■■□□□ 1.46
MAP1LC3A-204ENST00000476428 PGK1P00558 417 aa24.15■■□□□ 1.46
MAP1LC3A-204ENST00000476428 SCG2P13521 617 aa24.15■■□□□ 1.46
MAP1LC3A-204ENST00000476428 NAPAP54920 295 aa24.15■■□□□ 1.46
MAP1LC3A-204ENST00000476428 AKAP17AQ02040 695 aaKnown RBP24.15■■□□□ 1.46
MAP1LC3A-204ENST00000476428 SCRN1Q12765 414 aa24.15■■□□□ 1.46
MAP1LC3A-204ENST00000476428 STXBP2Q15833 593 aa24.15■■□□□ 1.46
MAP1LC3A-204ENST00000476428 TMEM63BQ5T3F8 832 aa24.15■■□□□ 1.46
MAP1LC3A-204ENST00000476428 NECAB2Q7Z6G3 386 aa24.15■■□□□ 1.46
MAP1LC3A-204ENST00000476428 ZNF713Q8N859 430 aaPredicted RBP24.15■■□□□ 1.46
MAP1LC3A-204ENST00000476428 PDCD2LQ9BRP1 358 aa24.15■■□□□ 1.46
MAP1LC3A-204ENST00000476428 RNF26Q9BY78 433 aaPredicted RBP24.15■■□□□ 1.46
MAP1LC3A-204ENST00000476428 UPF2Q9HAU5 1272 aaKnown RBP24.15■■□□□ 1.46
MAP1LC3A-204ENST00000476428 RBM27Q9P2N5 1060 aaKnown RBP24.15■■□□□ 1.46
MAP1LC3A-204ENST00000476428 RBM47A0AV96 593 aaKnown RBP24.14■■□□□ 1.45
MAP1LC3A-204ENST00000476428 MYCNP04198 464 aaPredicted RBP24.14■■□□□ 1.45
MAP1LC3A-204ENST00000476428 SMPD1P17405 629 aa24.14■■□□□ 1.45
MAP1LC3A-204ENST00000476428 LRRC41Q15345 812 aa24.14■■□□□ 1.45
MAP1LC3A-204ENST00000476428 DNM1LO00429 736 aa24.13■■□□□ 1.45
MAP1LC3A-204ENST00000476428 ADAMTS4O75173 837 aa24.13■■□□□ 1.45
MAP1LC3A-204ENST00000476428 SSRP1Q08945 709 aaKnown RBP24.13■■□□□ 1.45
MAP1LC3A-204ENST00000476428 PGM5Q15124 567 aa24.13■■□□□ 1.45
MAP1LC3A-204ENST00000476428 UBE2SQ16763 222 aa24.13■■□□□ 1.45
MAP1LC3A-204ENST00000476428 ME3Q16798 604 aa24.13■■□□□ 1.45
MAP1LC3A-204ENST00000476428 PPP1R18Q6NYC8 613 aa24.13■■□□□ 1.45
MAP1LC3A-204ENST00000476428 IL31RAQ8NI17 732 aa24.13■■□□□ 1.45
MAP1LC3A-204ENST00000476428 BACH2Q9BYV9 841 aa24.13■■□□□ 1.45
MAP1LC3A-204ENST00000476428 WDR11Q9BZH6 1224 aa24.13■■□□□ 1.45
MAP1LC3A-204ENST00000476428 C11orf49Q9H6J7 331 aa24.13■■□□□ 1.45
MAP1LC3A-204ENST00000476428 GNEQ9Y223 722 aaKnown RBP24.13■■□□□ 1.45
MAP1LC3A-204ENST00000476428 SYNRGQ9UMZ2 1314 aa24.12■■□□□ 1.45
MAP1LC3A-204ENST00000476428 MYH6P13533 1939 aa24.12■■□□□ 1.45
MAP1LC3A-204ENST00000476428 SMCO2A6NFE2 343 aa24.12■■□□□ 1.45
MAP1LC3A-204ENST00000476428 EIF3JO75822 258 aaKnown RBP24.12■■□□□ 1.45
MAP1LC3A-204ENST00000476428 LARGE1O95461 756 aa24.12■■□□□ 1.45
MAP1LC3A-204ENST00000476428 COL6A1P12109 1028 aa24.12■■□□□ 1.45
MAP1LC3A-204ENST00000476428 MYCLP12524 364 aaPredicted RBP24.12■■□□□ 1.45
MAP1LC3A-204ENST00000476428 PTGS1P23219 599 aa24.12■■□□□ 1.45
MAP1LC3A-204ENST00000476428 CPLX2Q6PUV4 134 aaKnown RBP24.12■■□□□ 1.45
MAP1LC3A-204ENST00000476428 VSIG10LQ86VR7 867 aa24.12■■□□□ 1.45
MAP1LC3A-204ENST00000476428 RIC8AQ9NPQ8 531 aa24.12■■□□□ 1.45
MAP1LC3A-204ENST00000476428 GJA9P57773 515 aa24.11■■□□□ 1.45
MAP1LC3A-204ENST00000476428 IRX5P78411 483 aaPredicted RBP24.11■■□□□ 1.45
MAP1LC3A-204ENST00000476428 DUSP28Q4G0W2 176 aa24.11■■□□□ 1.45
MAP1LC3A-204ENST00000476428 SEPT14Q6ZU15 432 aa24.11■■□□□ 1.45
MAP1LC3A-204ENST00000476428 RNF180Q86T96 592 aa24.11■■□□□ 1.45
MAP1LC3A-204ENST00000476428 TRIM22Q8IYM9 498 aa24.11■■□□□ 1.45
MAP1LC3A-204ENST00000476428 NECAB1Q8N987 351 aa24.11■■□□□ 1.45
MAP1LC3A-204ENST00000476428 KLHDC9Q8NEP7 349 aa24.11■■□□□ 1.45
MAP1LC3A-204ENST00000476428 SCFD2Q8WU76 684 aa24.11■■□□□ 1.45
MAP1LC3A-204ENST00000476428 UPF3AQ9H1J1 476 aaKnown RBP24.11■■□□□ 1.45
MAP1LC3A-204ENST00000476428 BRCA2P51587 3418 aa24.11■■□□□ 1.45
MAP1LC3A-204ENST00000476428 FRMPD4Q14CM0 1322 aa24.1■■□□□ 1.45
MAP1LC3A-204ENST00000476428 MYADML2A6NDP7 307 aa24.1■■□□□ 1.45
MAP1LC3A-204ENST00000476428 KBTBD13C9JR72 458 aa24.1■■□□□ 1.45
MAP1LC3A-204ENST00000476428 DYNC1LI2O43237 492 aaPredicted RBP24.1■■□□□ 1.45
MAP1LC3A-204ENST00000476428 ADCY7P51828 1080 aa24.1■■□□□ 1.45
MAP1LC3A-204ENST00000476428 ZFP91Q96JP5 570 aaPredicted RBP24.1■■□□□ 1.45
MAP1LC3A-204ENST00000476428 Q9Y3F1 56 aa24.1■■□□□ 1.45
MAP1LC3A-204ENST00000476428 C6orf222P0C671 652 aaPredicted RBP24.09■■□□□ 1.45
MAP1LC3A-204ENST00000476428 CCND2P30279 289 aa24.09■■□□□ 1.45
MAP1LC3A-204ENST00000476428 TBC1D32Q96NH3 1257 aa24.09■■□□□ 1.45
MAP1LC3A-204ENST00000476428 SENP6Q9GZR1 1112 aaPredicted RBP24.09■■□□□ 1.45
MAP1LC3A-204ENST00000476428 SPC25Q9HBM1 224 aa24.09■■□□□ 1.45
MAP1LC3A-204ENST00000476428 PCDHA6Q9UN73 950 aa24.09■■□□□ 1.45
MAP1LC3A-204ENST00000476428 PCDHA8Q9Y5H6 950 aa24.09■■□□□ 1.45
MAP1LC3A-204ENST00000476428 MCM3APO60318 1980 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms