RNA–Protein interactions for RNA: ENST00000476234.5

EXOSC1-208, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-208ENST00000476234 PRR12Q9ULL5 1215 aa13.07□□□□□ -0.32
EXOSC1-208ENST00000476234 PRRC2BQ5JSZ5 2229 aaKnown RBP13.07□□□□□ -0.32
EXOSC1-208ENST00000476234 TRIM6-TRIM34B2RNG4 842 aa13.06□□□□□ -0.32
EXOSC1-208ENST00000476234 ICAM1P05362 532 aa13.06□□□□□ -0.32
EXOSC1-208ENST00000476234 CYP2C9P11712 490 aa13.06□□□□□ -0.32
EXOSC1-208ENST00000476234 SDSP20132 328 aa13.06□□□□□ -0.32
EXOSC1-208ENST00000476234 PDE4BQ07343 736 aa13.06□□□□□ -0.32
EXOSC1-208ENST00000476234 PPP4R3BQ5MIZ7 849 aa13.06□□□□□ -0.32
EXOSC1-208ENST00000476234 EEPD1Q7L9B9 569 aa13.06□□□□□ -0.32
EXOSC1-208ENST00000476234 MICALL1Q8N3F8 863 aa13.06□□□□□ -0.32
EXOSC1-208ENST00000476234 RILPL2Q969X0 211 aa13.06□□□□□ -0.32
EXOSC1-208ENST00000476234 PURBQ96QR8 312 aaKnown RBP13.06□□□□□ -0.32
EXOSC1-208ENST00000476234 LRFN3Q9BTN0 628 aa13.06□□□□□ -0.32
EXOSC1-208ENST00000476234 IL25Q9H293 177 aa13.06□□□□□ -0.32
EXOSC1-208ENST00000476234 EPHX3Q9H6B9 360 aa13.06□□□□□ -0.32
EXOSC1-208ENST00000476234 SCN10AQ9Y5Y9 1956 aa13.06□□□□□ -0.32
EXOSC1-208ENST00000476234 GTPBP6O43824 516 aaPredicted RBP13.05□□□□□ -0.32
EXOSC1-208ENST00000476234 LPXNO60711 386 aa13.05□□□□□ -0.32
EXOSC1-208ENST00000476234 ARHGEF15O94989 841 aa13.05□□□□□ -0.32
EXOSC1-208ENST00000476234 ACTN1P12814 892 aa13.05□□□□□ -0.32
EXOSC1-208ENST00000476234 CD44P16070 742 aaKnown RBP13.05□□□□□ -0.32
EXOSC1-208ENST00000476234 CPT1AP50416 773 aa13.05□□□□□ -0.32
EXOSC1-208ENST00000476234 ALDH5A1P51649 535 aaPredicted RBP13.05□□□□□ -0.32
EXOSC1-208ENST00000476234 HAND2P61296 217 aa13.05□□□□□ -0.32
EXOSC1-208ENST00000476234 BTNL9Q6UXG8 535 aa13.05□□□□□ -0.32
EXOSC1-208ENST00000476234 KCTD1Q719H9 257 aa13.05□□□□□ -0.32
EXOSC1-208ENST00000476234 HERC6Q8IVU3 1022 aa13.05□□□□□ -0.32
EXOSC1-208ENST00000476234 MTG1Q9BT17 334 aaPredicted RBP13.05□□□□□ -0.32
EXOSC1-208ENST00000476234 WDR11Q9BZH6 1224 aa13.05□□□□□ -0.32
EXOSC1-208ENST00000476234 RANBP17Q9H2T7 1088 aaKnown RBP13.05□□□□□ -0.32
EXOSC1-208ENST00000476234 ADD3Q9UEY8 706 aaKnown RBP13.05□□□□□ -0.32
EXOSC1-208ENST00000476234 SCN5AQ14524 2016 aa13.05□□□□□ -0.32
EXOSC1-208ENST00000476234 TANC1Q9C0D5 1861 aa13.04□□□□□ -0.32
EXOSC1-208ENST00000476234 A6NJR5 290 aa13.04□□□□□ -0.32
EXOSC1-208ENST00000476234 ORC4O43929 436 aa13.04□□□□□ -0.32
EXOSC1-208ENST00000476234 SLC3A2P08195 630 aaKnown RBP13.04□□□□□ -0.32
EXOSC1-208ENST00000476234 IQCF3P0C7M6 154 aa13.04□□□□□ -0.32
EXOSC1-208ENST00000476234 SNAP25P60880 206 aa13.04□□□□□ -0.32
EXOSC1-208ENST00000476234 PTPN11Q06124 597 aaPredicted RBP13.04□□□□□ -0.32
EXOSC1-208ENST00000476234 IKQ13123 557 aaPredicted RBP13.04□□□□□ -0.32
EXOSC1-208ENST00000476234 BAATQ14032 418 aaPredicted RBP13.04□□□□□ -0.32
EXOSC1-208ENST00000476234 SKIV2LQ15477 1246 aaKnown RBP13.04□□□□□ -0.32
EXOSC1-208ENST00000476234 NBPF20Q3BBV1 942 aa13.04□□□□□ -0.32
EXOSC1-208ENST00000476234 KRT40Q6A162 431 aa13.04□□□□□ -0.32
EXOSC1-208ENST00000476234 NFRKBQ6P4R8 1299 aa13.04□□□□□ -0.32
EXOSC1-208ENST00000476234 NSMFQ6X4W1 530 aa13.04□□□□□ -0.32
EXOSC1-208ENST00000476234 DEFB128Q7Z7B8 93 aa13.04□□□□□ -0.32
EXOSC1-208ENST00000476234 TBC1D10CQ8IV04 446 aa13.04□□□□□ -0.32
EXOSC1-208ENST00000476234 CCDC136Q96JN2 1154 aa13.04□□□□□ -0.32
EXOSC1-208ENST00000476234 CCPG1Q9ULG6 757 aa13.04□□□□□ -0.32
EXOSC1-208ENST00000476234 CCDC171Q6TFL3 1326 aa13.04□□□□□ -0.32
EXOSC1-208ENST00000476234 TSPY2A6NKD2 308 aa13.03□□□□□ -0.32
EXOSC1-208ENST00000476234 NKRFO15226 690 aaKnown RBP eCLIP13.03□□□□□ -0.32
EXOSC1-208ENST00000476234 RANBP6O60518 1105 aaKnown RBP13.03□□□□□ -0.32
EXOSC1-208ENST00000476234 KPNA6O60684 536 aa13.03□□□□□ -0.32
EXOSC1-208ENST00000476234 GPR37L1O60883 481 aa13.03□□□□□ -0.32
EXOSC1-208ENST00000476234 BAIAP3O94812 1187 aa13.03□□□□□ -0.32
EXOSC1-208ENST00000476234 EDNRBP24530 442 aa13.03□□□□□ -0.32
EXOSC1-208ENST00000476234 GRB10Q13322 594 aa13.03□□□□□ -0.32
EXOSC1-208ENST00000476234 HLA-CQ95604 372 aa13.03□□□□□ -0.32
EXOSC1-208ENST00000476234 CERS4Q9HA82 394 aa13.03□□□□□ -0.32
EXOSC1-208ENST00000476234 C11orf16Q9NQ32 467 aa13.03□□□□□ -0.32
EXOSC1-208ENST00000476234 LMCD1Q9NZU5 365 aa13.03□□□□□ -0.32
EXOSC1-208ENST00000476234 NFIBO00712 420 aa13.02□□□□□ -0.33
EXOSC1-208ENST00000476234 MYL3P08590 195 aa13.02□□□□□ -0.33
EXOSC1-208ENST00000476234 GSPT1P15170 499 aaKnown RBP13.02□□□□□ -0.33
EXOSC1-208ENST00000476234 GPNMBQ14956 572 aa13.02□□□□□ -0.33
EXOSC1-208ENST00000476234 TMEM31Q5JXX7 168 aa13.02□□□□□ -0.33
EXOSC1-208ENST00000476234 TTBK2Q6IQ55 1244 aa13.02□□□□□ -0.33
EXOSC1-208ENST00000476234 CWC27Q6UX04 472 aaKnown RBP13.02□□□□□ -0.33
EXOSC1-208ENST00000476234 DCAF4Q8WV16 495 aa13.02□□□□□ -0.33
EXOSC1-208ENST00000476234 CLEC4DQ8WXI8 215 aa13.02□□□□□ -0.33
EXOSC1-208ENST00000476234 ARNTL2Q8WYA1 636 aa13.02□□□□□ -0.33
EXOSC1-208ENST00000476234 KHSRPQ92945 711 aaKnown RBP eCLIP13.02□□□□□ -0.33
EXOSC1-208ENST00000476234 CTAGE1Q96RT6 745 aa13.02□□□□□ -0.33
EXOSC1-208ENST00000476234 ISY1Q9ULR0 285 aaKnown RBP13.02□□□□□ -0.33
EXOSC1-208ENST00000476234 STX8Q9UNK0 236 aa13.02□□□□□ -0.33
EXOSC1-208ENST00000476234 HCN4Q9Y3Q4 1203 aa13.02□□□□□ -0.33
EXOSC1-208ENST00000476234 KIF28PB7ZC32 967 aa13.01□□□□□ -0.33
EXOSC1-208ENST00000476234 BFSP2Q13515 415 aa13.01□□□□□ -0.33
EXOSC1-208ENST00000476234 BRDTQ58F21 947 aaPredicted RBP13.01□□□□□ -0.33
EXOSC1-208ENST00000476234 RRP12Q5JTH9 1297 aaKnown RBP13.01□□□□□ -0.33
EXOSC1-208ENST00000476234 SPRED2Q7Z698 418 aa13.01□□□□□ -0.33
EXOSC1-208ENST00000476234 TICAM2Q86XR7 235 aa13.01□□□□□ -0.33
EXOSC1-208ENST00000476234 RETREG2Q8NC44 543 aa13.01□□□□□ -0.33
EXOSC1-208ENST00000476234 OR6J1Q8NGC5 347 aa13.01□□□□□ -0.33
EXOSC1-208ENST00000476234 SCFD2Q8WU76 684 aa13.01□□□□□ -0.33
EXOSC1-208ENST00000476234 GPHNQ9NQX3 736 aaPredicted RBP13.01□□□□□ -0.33
EXOSC1-208ENST00000476234 MTMR7Q9Y216 660 aa13.01□□□□□ -0.33
EXOSC1-208ENST00000476234 ZMYM6O95789 1325 aa13.01□□□□□ -0.33
EXOSC1-208ENST00000476234 NEDD4P46934 1319 aa13.01□□□□□ -0.33
EXOSC1-208ENST00000476234 PTPRSQ13332 1948 aa13.01□□□□□ -0.33
EXOSC1-208ENST00000476234 COL4A4P53420 1690 aaPredicted RBP13□□□□□ -0.33
EXOSC1-208ENST00000476234 RAD50Q92878 1312 aa13□□□□□ -0.33
EXOSC1-208ENST00000476234 PI4K2BG5E9Z4 385 aa13□□□□□ -0.33
EXOSC1-208ENST00000476234 RBL2Q08999 1139 aa13□□□□□ -0.33
EXOSC1-208ENST00000476234 FAM47CQ5HY64 1035 aa13□□□□□ -0.33
EXOSC1-208ENST00000476234 SYDE2Q5VT97 1194 aa13□□□□□ -0.33
EXOSC1-208ENST00000476234 SLC30A10Q6XR72 485 aa13□□□□□ -0.33
EXOSC1-208ENST00000476234 SESTD1Q86VW0 696 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms