RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 PPP2R2DQ66LE6 453 aa29.2■■■□□ 2.26
TMEM54-205ENST00000475208 DEFB128Q7Z7B8 93 aa29.2■■■□□ 2.26
TMEM54-205ENST00000475208 UBA5Q9GZZ9 404 aa29.2■■■□□ 2.26
TMEM54-205ENST00000475208 PCDHA11Q9Y5I1 949 aa29.2■■■□□ 2.26
TMEM54-205ENST00000475208 A6NJR5 290 aa29.19■■■□□ 2.26
TMEM54-205ENST00000475208 B4DLN1 442 aa29.19■■■□□ 2.26
TMEM54-205ENST00000475208 KPNA6O60684 536 aa29.19■■■□□ 2.26
TMEM54-205ENST00000475208 TXNP10599 105 aaKnown RBP29.19■■■□□ 2.26
TMEM54-205ENST00000475208 SDSP20132 328 aa29.19■■■□□ 2.26
TMEM54-205ENST00000475208 MRPL12P52815 198 aaKnown RBP29.19■■■□□ 2.26
TMEM54-205ENST00000475208 NFRKBQ6P4R8 1299 aa29.19■■■□□ 2.26
TMEM54-205ENST00000475208 DGKHQ86XP1 1220 aa29.19■■■□□ 2.26
TMEM54-205ENST00000475208 ATXN2LQ8WWM7 1075 aaKnown RBP29.19■■■□□ 2.26
TMEM54-205ENST00000475208 ZNF213O14771 459 aa29.18■■■□□ 2.26
TMEM54-205ENST00000475208 ARIH2O95376 493 aa29.18■■■□□ 2.26
TMEM54-205ENST00000475208 SCN5AQ14524 2016 aa29.18■■■□□ 2.26
TMEM54-205ENST00000475208 LAMA4Q16363 1823 aa29.17■■■□□ 2.26
TMEM54-205ENST00000475208 CDC37Q16543 378 aaPredicted RBP29.17■■■□□ 2.26
TMEM54-205ENST00000475208 PNMA1Q8ND90 353 aa29.17■■■□□ 2.26
TMEM54-205ENST00000475208 RGS22Q8NE09 1264 aa29.17■■■□□ 2.26
TMEM54-205ENST00000475208 B4GALNT3Q6L9W6 998 aa29.16■■■□□ 2.26
TMEM54-205ENST00000475208 IQCA1Q86XH1 822 aa29.16■■■□□ 2.26
TMEM54-205ENST00000475208 ASB2Q96Q27 587 aa29.16■■■□□ 2.26
TMEM54-205ENST00000475208 TANC1Q9C0D5 1861 aa29.15■■■□□ 2.26
TMEM54-205ENST00000475208 MUC3AQ02505 3323 aa29.15■■■□□ 2.26
TMEM54-205ENST00000475208 TNFRSF10AO00220 468 aa29.15■■■□□ 2.26
TMEM54-205ENST00000475208 KDM4AO75164 1064 aa29.15■■■□□ 2.26
TMEM54-205ENST00000475208 ACTN1P12814 892 aa29.15■■■□□ 2.26
TMEM54-205ENST00000475208 RFC2P35250 354 aa29.15■■■□□ 2.26
TMEM54-205ENST00000475208 PTPN11Q06124 597 aaPredicted RBP29.15■■■□□ 2.26
TMEM54-205ENST00000475208 SMC5Q8IY18 1101 aa29.15■■■□□ 2.26
TMEM54-205ENST00000475208 KAT14Q9H8E8 782 aa29.15■■■□□ 2.26
TMEM54-205ENST00000475208 ABCB11O95342 1321 aa29.15■■■□□ 2.26
TMEM54-205ENST00000475208 PITPNM1O00562 1244 aa29.14■■■□□ 2.26
TMEM54-205ENST00000475208 NT5C2P49902 561 aa29.14■■■□□ 2.26
TMEM54-205ENST00000475208 CCDC178Q5BJE1 867 aa29.14■■■□□ 2.26
TMEM54-205ENST00000475208 RETREG2Q8NC44 543 aa29.14■■■□□ 2.26
TMEM54-205ENST00000475208 TBC1D5Q92609 795 aa29.14■■■□□ 2.26
TMEM54-205ENST00000475208 NOD1Q9Y239 953 aa29.14■■■□□ 2.26
TMEM54-205ENST00000475208 IQCF3P0C7M6 154 aa29.13■■■□□ 2.25
TMEM54-205ENST00000475208 CHMP4BP1P59074 171 aa29.13■■■□□ 2.25
TMEM54-205ENST00000475208 MRPS5P82675 430 aaKnown RBP29.13■■■□□ 2.25
TMEM54-205ENST00000475208 TMEM67Q5HYA8 995 aa29.13■■■□□ 2.25
TMEM54-205ENST00000475208 CCDC62Q6P9F0 684 aa29.13■■■□□ 2.25
TMEM54-205ENST00000475208 CWC27Q6UX04 472 aaKnown RBP29.13■■■□□ 2.25
TMEM54-205ENST00000475208 PLEKHM2Q8IWE5 1019 aa29.13■■■□□ 2.25
TMEM54-205ENST00000475208 ADGRF4Q8IZF3 695 aa29.13■■■□□ 2.25
TMEM54-205ENST00000475208 SYTL5Q8TDW5 730 aaPredicted RBP29.13■■■□□ 2.25
TMEM54-205ENST00000475208 DIAPH3Q9NSV4 1193 aa29.13■■■□□ 2.25
TMEM54-205ENST00000475208 B4E1Z4 1266 aa29.12■■■□□ 2.25
TMEM54-205ENST00000475208 BFSP2Q13515 415 aa29.12■■■□□ 2.25
TMEM54-205ENST00000475208 ASPRV1Q53RT3 343 aa29.12■■■□□ 2.25
TMEM54-205ENST00000475208 MICALL1Q8N3F8 863 aa29.12■■■□□ 2.25
TMEM54-205ENST00000475208 AFG1LQ8WV93 481 aa29.12■■■□□ 2.25
TMEM54-205ENST00000475208 TAAR1Q96RJ0 339 aa29.12■■■□□ 2.25
TMEM54-205ENST00000475208 SLC9A7Q96T83 725 aa29.12■■■□□ 2.25
TMEM54-205ENST00000475208 MAF1Q9H063 256 aa29.12■■■□□ 2.25
TMEM54-205ENST00000475208 RWDD1Q9H446 243 aaPredicted RBP29.12■■■□□ 2.25
TMEM54-205ENST00000475208 COL20A1Q9P218 1284 aa29.12■■■□□ 2.25
TMEM54-205ENST00000475208 CA3P07451 260 aa29.11■■■□□ 2.25
TMEM54-205ENST00000475208 LY6KQ17RY6 165 aa29.11■■■□□ 2.25
TMEM54-205ENST00000475208 SEPT14Q6ZU15 432 aa29.11■■■□□ 2.25
TMEM54-205ENST00000475208 CHD1LQ86WJ1 897 aa29.11■■■□□ 2.25
TMEM54-205ENST00000475208 NSUN6Q8TEA1 469 aaKnown RBP29.11■■■□□ 2.25
TMEM54-205ENST00000475208 ANKS1AQ92625 1134 aa29.11■■■□□ 2.25
TMEM54-205ENST00000475208 ZSCAN10Q96SZ4 725 aaPredicted RBP29.11■■■□□ 2.25
TMEM54-205ENST00000475208 FTOQ9C0B1 505 aaKnown RBP eCLIP29.11■■■□□ 2.25
TMEM54-205ENST00000475208 OSBPL3Q9H4L5 887 aa29.11■■■□□ 2.25
TMEM54-205ENST00000475208 GH1P01241 217 aa29.1■■■□□ 2.25
TMEM54-205ENST00000475208 MMP3P08254 477 aa29.1■■■□□ 2.25
TMEM54-205ENST00000475208 ARHGAP1Q07960 439 aa29.1■■■□□ 2.25
TMEM54-205ENST00000475208 AAMPQ13685 434 aa29.1■■■□□ 2.25
TMEM54-205ENST00000475208 QRICH1Q2TAL8 776 aa29.1■■■□□ 2.25
TMEM54-205ENST00000475208 MCF2L2Q86YR7 1114 aa29.1■■■□□ 2.25
TMEM54-205ENST00000475208 ENAHQ8N8S7 591 aaPredicted RBP29.1■■■□□ 2.25
TMEM54-205ENST00000475208 ADAMTS19Q8TE59 1207 aa29.1■■■□□ 2.25
TMEM54-205ENST00000475208 DHX16O60231 1041 aaKnown RBP29.09■■■□□ 2.25
TMEM54-205ENST00000475208 PTGISQ16647 500 aa29.09■■■□□ 2.25
TMEM54-205ENST00000475208 RMDN3Q96TC7 470 aa29.09■■■□□ 2.25
TMEM54-205ENST00000475208 STXBP2Q15833 593 aa29.08■■■□□ 2.25
TMEM54-205ENST00000475208 CHST3Q7LGC8 479 aa29.08■■■□□ 2.25
TMEM54-205ENST00000475208 IL27Q8NEV9 243 aa29.08■■■□□ 2.25
TMEM54-205ENST00000475208 PHOSPHO2Q8TCD6 241 aa29.08■■■□□ 2.25
TMEM54-205ENST00000475208 IWS1Q96ST2 819 aa29.08■■■□□ 2.25
TMEM54-205ENST00000475208 TSPYL2Q9H2G4 693 aaPredicted RBP29.08■■■□□ 2.25
TMEM54-205ENST00000475208 ZSWIM5Q9P217 1185 aa29.08■■■□□ 2.25
TMEM54-205ENST00000475208 MRPL11Q9Y3B7 192 aaKnown RBP29.08■■■□□ 2.25
TMEM54-205ENST00000475208 PARP1P09874 1014 aaKnown RBP29.07■■■□□ 2.24
TMEM54-205ENST00000475208 NUCB1Q02818 461 aa29.07■■■□□ 2.24
TMEM54-205ENST00000475208 IMMTQ16891 758 aaKnown RBP29.07■■■□□ 2.24
TMEM54-205ENST00000475208 FBXO11Q86XK2 927 aa29.07■■■□□ 2.24
TMEM54-205ENST00000475208 CCDC155Q8N6L0 562 aa29.07■■■□□ 2.24
TMEM54-205ENST00000475208 DSCC1Q9BVC3 393 aa29.07■■■□□ 2.24
TMEM54-205ENST00000475208 JMJD4Q9H9V9 463 aa29.07■■■□□ 2.24
TMEM54-205ENST00000475208 CERS4Q9HA82 394 aa29.07■■■□□ 2.24
TMEM54-205ENST00000475208 VAT1LQ9HCJ6 419 aa29.07■■■□□ 2.24
TMEM54-205ENST00000475208 RFXAPO00287 272 aa29.06■■■□□ 2.24
TMEM54-205ENST00000475208 HIP1O00291 1037 aa29.06■■■□□ 2.24
TMEM54-205ENST00000475208 EIF2AK2P19525 551 aaKnown RBP29.06■■■□□ 2.24
TMEM54-205ENST00000475208 GDF6Q6KF10 455 aaPredicted RBP29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms