RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 CYBAP13498 195 aa18.09■□□□□ 0.49
COL1A1-204ENST00000474644 EDNRBP24530 442 aa18.09■□□□□ 0.49
COL1A1-204ENST00000474644 PWP2Q15269 919 aaKnown RBP18.09■□□□□ 0.49
COL1A1-204ENST00000474644 MTFR1Q15390 333 aa18.09■□□□□ 0.49
COL1A1-204ENST00000474644 FCHSD1Q86WN1 690 aa18.09■□□□□ 0.49
COL1A1-204ENST00000474644 TEX2Q8IWB9 1127 aa18.09■□□□□ 0.49
COL1A1-204ENST00000474644 TRPV1Q8NER1 839 aa18.09■□□□□ 0.49
COL1A1-204ENST00000474644 NSUN6Q8TEA1 469 aaKnown RBP18.09■□□□□ 0.49
COL1A1-204ENST00000474644 ZMYND12Q9H0C1 365 aa18.09■□□□□ 0.49
COL1A1-204ENST00000474644 UNC93B1Q9H1C4 597 aa18.09■□□□□ 0.49
COL1A1-204ENST00000474644 PXMP2Q9NR77 195 aa18.09■□□□□ 0.49
COL1A1-204ENST00000474644 FRMPD4Q14CM0 1322 aa18.08■□□□□ 0.49
COL1A1-204ENST00000474644 CCL5P13501 91 aa18.08■□□□□ 0.48
COL1A1-204ENST00000474644 EIF2AK2P19525 551 aaKnown RBP18.08■□□□□ 0.48
COL1A1-204ENST00000474644 CCND3P30281 292 aaPredicted RBP18.08■□□□□ 0.48
COL1A1-204ENST00000474644 MRPL12P52815 198 aaKnown RBP18.08■□□□□ 0.48
COL1A1-204ENST00000474644 PRAMEF19Q5SWL8 479 aa18.08■□□□□ 0.48
COL1A1-204ENST00000474644 ARHGEF16Q5VV41 709 aa18.08■□□□□ 0.48
COL1A1-204ENST00000474644 WASF1Q92558 559 aa18.08■□□□□ 0.48
COL1A1-204ENST00000474644 ALG1Q9BT22 464 aa18.08■□□□□ 0.48
COL1A1-204ENST00000474644 GLT8D2Q9H1C3 349 aa18.08■□□□□ 0.48
COL1A1-204ENST00000474644 C6orf50Q9HD87 102 aa18.08■□□□□ 0.48
COL1A1-204ENST00000474644 NRBP1Q9UHY1 535 aa18.08■□□□□ 0.48
COL1A1-204ENST00000474644 CNPY2Q9Y2B0 182 aa18.08■□□□□ 0.48
COL1A1-204ENST00000474644 RPTORQ8N122 1335 aa18.07■□□□□ 0.48
COL1A1-204ENST00000474644 ADAMTS3O15072 1205 aa18.07■□□□□ 0.48
COL1A1-204ENST00000474644 FAM177A1Q8N128 213 aaPredicted RBP18.07■□□□□ 0.48
COL1A1-204ENST00000474644 MPHOSPH6Q99547 160 aaKnown RBP18.07■□□□□ 0.48
COL1A1-204ENST00000474644 PDCD2LQ9BRP1 358 aa18.07■□□□□ 0.48
COL1A1-204ENST00000474644 KATNBL1Q9H079 304 aa18.07■□□□□ 0.48
COL1A1-204ENST00000474644 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.07■□□□□ 0.48
COL1A1-204ENST00000474644 ZNF865P0CJ78 1059 aaPredicted RBP18.06■□□□□ 0.48
COL1A1-204ENST00000474644 GNA11P29992 359 aa18.06■□□□□ 0.48
COL1A1-204ENST00000474644 CLK2P49760 499 aaKnown RBP18.06■□□□□ 0.48
COL1A1-204ENST00000474644 HMGN5P82970 282 aaKnown RBP18.06■□□□□ 0.48
COL1A1-204ENST00000474644 PDE4DQ08499 809 aa18.06■□□□□ 0.48
COL1A1-204ENST00000474644 FBXO16Q8IX29 292 aaPredicted RBP18.06■□□□□ 0.48
COL1A1-204ENST00000474644 IL31RAQ8NI17 732 aa18.06■□□□□ 0.48
COL1A1-204ENST00000474644 SNX21Q969T3 373 aa18.06■□□□□ 0.48
COL1A1-204ENST00000474644 IWS1Q96ST2 819 aa18.06■□□□□ 0.48
COL1A1-204ENST00000474644 ABHD16BQ9H3Z7 469 aa18.06■□□□□ 0.48
COL1A1-204ENST00000474644 HMX1Q9NP08 348 aaPredicted RBP18.06■□□□□ 0.48
COL1A1-204ENST00000474644 GJB4Q9NTQ9 266 aa18.06■□□□□ 0.48
COL1A1-204ENST00000474644 TMEM260Q9NX78 707 aa18.06■□□□□ 0.48
COL1A1-204ENST00000474644 ZHX1Q9UKY1 873 aaPredicted RBP18.06■□□□□ 0.48
COL1A1-204ENST00000474644 SPDYE3A6NKU9 549 aa18.05■□□□□ 0.48
COL1A1-204ENST00000474644 B4DLN1 442 aa18.05■□□□□ 0.48
COL1A1-204ENST00000474644 K7ELQ4 463 aaPredicted RBP18.05■□□□□ 0.48
COL1A1-204ENST00000474644 XBP1P17861 261 aa18.05■□□□□ 0.48
COL1A1-204ENST00000474644 NLRP5P59047 1200 aa18.05■□□□□ 0.48
COL1A1-204ENST00000474644 AP3B2Q13367 1082 aa18.05■□□□□ 0.48
COL1A1-204ENST00000474644 ACVR2BQ13705 512 aa18.05■□□□□ 0.48
COL1A1-204ENST00000474644 PGM5Q15124 567 aa18.05■□□□□ 0.48
COL1A1-204ENST00000474644 EEPD1Q7L9B9 569 aa18.05■□□□□ 0.48
COL1A1-204ENST00000474644 REXO1Q8N1G1 1221 aaKnown RBP18.05■□□□□ 0.48
COL1A1-204ENST00000474644 DAGLBQ8NCG7 672 aa18.05■□□□□ 0.48
COL1A1-204ENST00000474644 BICD2Q8TD16 824 aa18.05■□□□□ 0.48
COL1A1-204ENST00000474644 PGBD1Q96JS3 809 aa18.05■□□□□ 0.48
COL1A1-204ENST00000474644 PHF20Q9BVI0 1012 aa18.05■□□□□ 0.48
COL1A1-204ENST00000474644 RNF208Q9H0X6 261 aa18.05■□□□□ 0.48
COL1A1-204ENST00000474644 VTA1Q9NP79 307 aa18.05■□□□□ 0.48
COL1A1-204ENST00000474644 PAK6Q9NQU5 681 aaPredicted RBP18.05■□□□□ 0.48
COL1A1-204ENST00000474644 PCDHA6Q9UN73 950 aa18.05■□□□□ 0.48
COL1A1-204ENST00000474644 KCNJ14Q9UNX9 436 aa18.05■□□□□ 0.48
COL1A1-204ENST00000474644 PCDHA8Q9Y5H6 950 aa18.05■□□□□ 0.48
COL1A1-204ENST00000474644 CENPFP49454 3210 aa18.04■□□□□ 0.48
COL1A1-204ENST00000474644 NR3C2P08235 984 aa18.04■□□□□ 0.48
COL1A1-204ENST00000474644 CNGA1P29973 690 aa18.04■□□□□ 0.48
COL1A1-204ENST00000474644 CUL4AQ13619 759 aa18.04■□□□□ 0.48
COL1A1-204ENST00000474644 NPY5RQ15761 445 aa18.04■□□□□ 0.48
COL1A1-204ENST00000474644 RASGRP4Q8TDF6 673 aa18.04■□□□□ 0.48
COL1A1-204ENST00000474644 ANO3Q9BYT9 981 aa18.04■□□□□ 0.48
COL1A1-204ENST00000474644 PCDHA4Q9UN74 947 aa18.04■□□□□ 0.48
COL1A1-204ENST00000474644 SEPT4O43236 478 aa18.03■□□□□ 0.48
COL1A1-204ENST00000474644 FOSP01100 380 aaPredicted RBP18.03■□□□□ 0.48
COL1A1-204ENST00000474644 FOSBP53539 338 aa18.03■□□□□ 0.48
COL1A1-204ENST00000474644 STXBP2Q15833 593 aa18.03■□□□□ 0.48
COL1A1-204ENST00000474644 JAKMIP3Q5VZ66 844 aa18.03■□□□□ 0.48
COL1A1-204ENST00000474644 MCM3APO60318 1980 aa18.02■□□□□ 0.48
COL1A1-204ENST00000474644 KIAA0100Q14667 2235 aaKnown RBP18.02■□□□□ 0.48
COL1A1-204ENST00000474644 MYCLP12524 364 aaPredicted RBP18.02■□□□□ 0.48
COL1A1-204ENST00000474644 AKR1A1P14550 325 aa18.02■□□□□ 0.48
COL1A1-204ENST00000474644 CCND2P30279 289 aa18.02■□□□□ 0.48
COL1A1-204ENST00000474644 SOX10P56693 466 aa18.02■□□□□ 0.48
COL1A1-204ENST00000474644 CCDC144BQ3MJ40 725 aa18.02■□□□□ 0.48
COL1A1-204ENST00000474644 PCNX4Q63HM2 1172 aa18.02■□□□□ 0.48
COL1A1-204ENST00000474644 MCTP2Q6DN12 878 aa18.02■□□□□ 0.48
COL1A1-204ENST00000474644 GALNT17Q6IS24 598 aa18.02■□□□□ 0.48
COL1A1-204ENST00000474644 TAPT1Q6NXT6 567 aa18.02■□□□□ 0.48
COL1A1-204ENST00000474644 VSIG10LQ86VR7 867 aa18.02■□□□□ 0.48
COL1A1-204ENST00000474644 HSCBQ8IWL3 235 aa18.02■□□□□ 0.48
COL1A1-204ENST00000474644 BLIDQ8IZY5 108 aa18.02■□□□□ 0.48
COL1A1-204ENST00000474644 FAM184AQ8NB25 1140 aa18.02■□□□□ 0.48
COL1A1-204ENST00000474644 DEFB118Q96PH6 123 aa18.02■□□□□ 0.48
COL1A1-204ENST00000474644 EHMT1Q9H9B1 1298 aa18.02■□□□□ 0.48
COL1A1-204ENST00000474644 PDGFCQ9NRA1 345 aa18.02■□□□□ 0.48
COL1A1-204ENST00000474644 DDX20Q9UHI6 824 aaKnown RBP18.02■□□□□ 0.48
COL1A1-204ENST00000474644 M0R2N6 131 aa18.01■□□□□ 0.47
COL1A1-204ENST00000474644 ADCY6O43306 1168 aa18.01■□□□□ 0.47
COL1A1-204ENST00000474644 GJB1P08034 283 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms