RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 ADAMTS19Q8TE59 1207 aa15.08■□□□□ 0
SHROOM3-204ENST00000473602 MAP3K14Q99558 947 aa15.08■□□□□ 0
SHROOM3-204ENST00000473602 PPP1R12CQ9BZL4 782 aa15.08■□□□□ 0
SHROOM3-204ENST00000473602 SPC25Q9HBM1 224 aa15.08■□□□□ 0
SHROOM3-204ENST00000473602 ADD3Q9UEY8 706 aaKnown RBP15.08■□□□□ 0
SHROOM3-204ENST00000473602 MSRAQ9UJ68 235 aa15.08■□□□□ 0
SHROOM3-204ENST00000473602 ABCB11O95342 1321 aa15.08■□□□□ 0
SHROOM3-204ENST00000473602 NCOR1O75376 2440 aa15.07■□□□□ 0
SHROOM3-204ENST00000473602 A0A0U1RQG5 324 aaPredicted RBP15.07■□□□□ 0
SHROOM3-204ENST00000473602 PRC1O43663 620 aa15.07■□□□□ 0
SHROOM3-204ENST00000473602 DHX16O60231 1041 aaKnown RBP15.07■□□□□ 0
SHROOM3-204ENST00000473602 CYP2C18P33260 490 aa15.07■□□□□ 0
SHROOM3-204ENST00000473602 GJA9P57773 515 aa15.07■□□□□ 0
SHROOM3-204ENST00000473602 TROAPQ12815 778 aa15.07■□□□□ 0
SHROOM3-204ENST00000473602 BAATQ14032 418 aaPredicted RBP15.07■□□□□ 0
SHROOM3-204ENST00000473602 CCDC144BQ3MJ40 725 aa15.07■□□□□ 0
SHROOM3-204ENST00000473602 PSRC1Q6PGN9 363 aaPredicted RBP15.07■□□□□ 0
SHROOM3-204ENST00000473602 RNF207Q6ZRF8 634 aa15.07■□□□□ 0
SHROOM3-204ENST00000473602 CHST3Q7LGC8 479 aa15.07■□□□□ 0
SHROOM3-204ENST00000473602 CATIPQ7Z7H3 387 aa15.07■□□□□ 0
SHROOM3-204ENST00000473602 FAM126BQ8IXS8 530 aa15.07■□□□□ 0
SHROOM3-204ENST00000473602 RGS22Q8NE09 1264 aa15.07■□□□□ 0
SHROOM3-204ENST00000473602 CLEC4DQ8WXI8 215 aa15.07■□□□□ 0
SHROOM3-204ENST00000473602 UHRF1Q96T88 793 aaPredicted RBP15.07■□□□□ 0
SHROOM3-204ENST00000473602 CPVLQ9H3G5 476 aa15.07■□□□□ 0
SHROOM3-204ENST00000473602 JMJD4Q9H9V9 463 aa15.07■□□□□ 0
SHROOM3-204ENST00000473602 CXXC1Q9P0U4 656 aaPredicted RBP15.07■□□□□ 0
SHROOM3-204ENST00000473602 MAD2L2Q9UI95 211 aa15.07■□□□□ 0
SHROOM3-204ENST00000473602 PTPDC1A2A3K4 754 aa15.06■□□□□ 0
SHROOM3-204ENST00000473602 TLR3O15455 904 aaKnown RBP15.06■□□□□ 0
SHROOM3-204ENST00000473602 DDAH1O94760 285 aa15.06■□□□□ 0
SHROOM3-204ENST00000473602 LIFRP42702 1097 aa15.06■□□□□ 0
SHROOM3-204ENST00000473602 C1QBPQ07021 282 aaKnown RBP15.06■□□□□ 0
SHROOM3-204ENST00000473602 TRAF1Q13077 416 aa15.06■□□□□ 0
SHROOM3-204ENST00000473602 QRICH1Q2TAL8 776 aa15.06■□□□□ 0
SHROOM3-204ENST00000473602 TSGA10IPQ3SY00 556 aa15.06■□□□□ 0
SHROOM3-204ENST00000473602 USH1GQ495M9 461 aa15.06■□□□□ 0
SHROOM3-204ENST00000473602 FBXO11Q86XK2 927 aa15.06■□□□□ 0
SHROOM3-204ENST00000473602 STAG2Q8N3U4 1231 aa15.06■□□□□ 0
SHROOM3-204ENST00000473602 MORC4Q8TE76 937 aa15.06■□□□□ 0
SHROOM3-204ENST00000473602 HERVK_113Q902F9 699 aa15.06■□□□□ 0
SHROOM3-204ENST00000473602 MTMR8Q96EF0 704 aa15.06■□□□□ 0
SHROOM3-204ENST00000473602 MPHOSPH6Q99547 160 aaKnown RBP15.06■□□□□ 0
SHROOM3-204ENST00000473602 KATNBL1Q9H079 304 aa15.06■□□□□ 0
SHROOM3-204ENST00000473602 UPF3AQ9H1J1 476 aaKnown RBP15.06■□□□□ 0
SHROOM3-204ENST00000473602 NKX2-4Q9H2Z4 354 aa15.06■□□□□ 0
SHROOM3-204ENST00000473602 LY9Q9HBG7 655 aa15.06■□□□□ 0
SHROOM3-204ENST00000473602 ASTN1O14525 1302 aa15.06■□□□□ 0
SHROOM3-204ENST00000473602 BDP1A6H8Y1 2624 aa15.05■□□□□ 0
SHROOM3-204ENST00000473602 CHD7Q9P2D1 2997 aa15.05■□□□□ 0
SHROOM3-204ENST00000473602 XIRP2A4UGR9 3374 aa15.05■□□□□ -0
SHROOM3-204ENST00000473602 CD4P01730 458 aa15.05■□□□□ -0
SHROOM3-204ENST00000473602 RPS6P62753 249 aaKnown RBP15.05■□□□□ -0
SHROOM3-204ENST00000473602 KRT32Q14532 448 aa15.05■□□□□ -0
SHROOM3-204ENST00000473602 RAB30Q15771 203 aa15.05■□□□□ -0
SHROOM3-204ENST00000473602 MCF2L2Q86YR7 1114 aa15.05■□□□□ -0
SHROOM3-204ENST00000473602 ZNF654Q8IZM8 581 aa15.05■□□□□ -0
SHROOM3-204ENST00000473602 DNERQ8NFT8 737 aa15.05■□□□□ -0
SHROOM3-204ENST00000473602 AMNQ9BXJ7 453 aa15.05■□□□□ -0
SHROOM3-204ENST00000473602 RIOX1Q9H6W3 641 aa15.05■□□□□ -0
SHROOM3-204ENST00000473602 SENP2Q9HC62 589 aa15.05■□□□□ -0
SHROOM3-204ENST00000473602 IL23AQ9NPF7 189 aa15.05■□□□□ -0
SHROOM3-204ENST00000473602 MRPL11Q9Y3B7 192 aaKnown RBP15.05■□□□□ -0
SHROOM3-204ENST00000473602 B4DLN1 442 aa15.04■□□□□ -0
SHROOM3-204ENST00000473602 SH2B2O14492 632 aaPredicted RBP15.04■□□□□ -0
SHROOM3-204ENST00000473602 ZBTB5O15062 677 aa15.04■□□□□ -0
SHROOM3-204ENST00000473602 CTAGE5O15320 804 aa15.04■□□□□ -0
SHROOM3-204ENST00000473602 REC8O95072 547 aa15.04■□□□□ -0
SHROOM3-204ENST00000473602 FGBP02675 491 aa15.04■□□□□ -0
SHROOM3-204ENST00000473602 CALM1P0DP23 149 aa15.04■□□□□ -0
SHROOM3-204ENST00000473602 CALM2P0DP24 149 aa15.04■□□□□ -0
SHROOM3-204ENST00000473602 CALM3P0DP25 149 aa15.04■□□□□ -0
SHROOM3-204ENST00000473602 KIF5BP33176 963 aa15.04■□□□□ -0
SHROOM3-204ENST00000473602 ALDH5A1P51649 535 aaPredicted RBP15.04■□□□□ -0
SHROOM3-204ENST00000473602 MRPL12P52815 198 aaKnown RBP15.04■□□□□ -0
SHROOM3-204ENST00000473602 BEX3Q00994 111 aa15.04■□□□□ -0
SHROOM3-204ENST00000473602 SLC30A10Q6XR72 485 aa15.04■□□□□ -0
SHROOM3-204ENST00000473602 IL27Q8NEV9 243 aa15.04■□□□□ -0
SHROOM3-204ENST00000473602 CTCFLQ8NI51 663 aaPredicted RBP15.04■□□□□ -0
SHROOM3-204ENST00000473602 NEK1Q96PY6 1258 aa15.04■□□□□ -0
SHROOM3-204ENST00000473602 SLC28A3Q9HAS3 691 aa15.04■□□□□ -0
SHROOM3-204ENST00000473602 VAT1LQ9HCJ6 419 aa15.04■□□□□ -0
SHROOM3-204ENST00000473602 VTA1Q9NP79 307 aa15.04■□□□□ -0
SHROOM3-204ENST00000473602 YBX2Q9Y2T7 364 aaKnown RBP15.04■□□□□ -0
SHROOM3-204ENST00000473602 CCDC69A6NI79 296 aa15.03■□□□□ -0
SHROOM3-204ENST00000473602 EPB41L2O43491 1005 aaKnown RBP15.03■□□□□ -0
SHROOM3-204ENST00000473602 CALML3P27482 149 aa15.03■□□□□ -0
SHROOM3-204ENST00000473602 SMARCA1P28370 1054 aa15.03■□□□□ -0
SHROOM3-204ENST00000473602 GNAQP50148 359 aa15.03■□□□□ -0
SHROOM3-204ENST00000473602 CXCL17Q6UXB2 119 aa15.03■□□□□ -0
SHROOM3-204ENST00000473602 NFXL1Q6ZNB6 911 aa15.03■□□□□ -0
SHROOM3-204ENST00000473602 NOL8Q76FK4 1167 aaKnown RBP15.03■□□□□ -0
SHROOM3-204ENST00000473602 OTOP2Q7RTS6 562 aa15.03■□□□□ -0
SHROOM3-204ENST00000473602 SGMS1Q86VZ5 419 aa15.03■□□□□ -0
SHROOM3-204ENST00000473602 SAMD3Q8N6K7 520 aa15.03■□□□□ -0
SHROOM3-204ENST00000473602 LZTS2Q9BRK4 669 aa15.03■□□□□ -0
SHROOM3-204ENST00000473602 MTIF3Q9H2K0 278 aaKnown RBP15.03■□□□□ -0
SHROOM3-204ENST00000473602 HIPK3Q9H422 1215 aa15.03■□□□□ -0
SHROOM3-204ENST00000473602 MAP3K20Q9NYL2 800 aaKnown RBP15.03■□□□□ -0
SHROOM3-204ENST00000473602 BAZ2BQ9UIF8 2168 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms