RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 NEDD1Q8NHV4 660 aa8.19□□□□□ -1.1
CKS1B-205ENST00000473344 LARP6Q9BRS8 491 aaKnown RBP8.19□□□□□ -1.1
CKS1B-205ENST00000473344 TRPV6Q9H1D0 765 aa8.19□□□□□ -1.1
CKS1B-205ENST00000473344 EPB41L4AQ9HCS5 686 aaPredicted RBP8.19□□□□□ -1.1
CKS1B-205ENST00000473344 PPP4R2Q9NY27 417 aa8.19□□□□□ -1.1
CKS1B-205ENST00000473344 RABGEF1Q9UJ41 708 aa8.19□□□□□ -1.1
CKS1B-205ENST00000473344 GNEQ9Y223 722 aaKnown RBP8.19□□□□□ -1.1
CKS1B-205ENST00000473344 Q9Y3F1 56 aa8.19□□□□□ -1.1
CKS1B-205ENST00000473344 UMODL1Q5DID0 1318 aa8.19□□□□□ -1.1
CKS1B-205ENST00000473344 M0R2C6 588 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 GTPBP6O43824 516 aaPredicted RBP8.18□□□□□ -1.1
CKS1B-205ENST00000473344 EIF5BO60841 1220 aaKnown RBP8.18□□□□□ -1.1
CKS1B-205ENST00000473344 PFKMP08237 780 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 ACTN1P12814 892 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 ATP2A2P16615 1042 aaKnown RBP8.18□□□□□ -1.1
CKS1B-205ENST00000473344 SMPD1P17405 629 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 CPT1AP50416 773 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 RABGGTBP53611 331 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 PSMC6P62333 389 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 PPARAQ07869 468 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 AAK1Q2M2I8 961 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 BRDTQ58F21 947 aaPredicted RBP8.18□□□□□ -1.1
CKS1B-205ENST00000473344 TSHZ3Q63HK5 1081 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 NSMFQ6X4W1 530 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 NYAP1Q6ZVC0 841 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 KCTD1Q719H9 257 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 FBXO16Q8IX29 292 aaPredicted RBP8.18□□□□□ -1.1
CKS1B-205ENST00000473344 SCLYQ96I15 445 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 MPHOSPH6Q99547 160 aaKnown RBP8.18□□□□□ -1.1
CKS1B-205ENST00000473344 FSD1Q9BTV5 496 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 ADAM33Q9BZ11 813 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 VTA1Q9NP79 307 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 PDGFCQ9NRA1 345 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 POLR3EQ9NVU0 708 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 CYP39A1Q9NYL5 469 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 ADD3Q9UEY8 706 aaKnown RBP8.18□□□□□ -1.1
CKS1B-205ENST00000473344 CCPG1Q9ULG6 757 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 MTMR7Q9Y216 660 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 YBX2Q9Y2T7 364 aaKnown RBP8.18□□□□□ -1.1
CKS1B-205ENST00000473344 PCDHA11Q9Y5I1 949 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 ASTN1O14525 1302 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 ZNF536O15090 1300 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 PLIN4Q96Q06 1357 aa8.18□□□□□ -1.1
CKS1B-205ENST00000473344 ZNFX1Q9P2E3 1918 aaKnown RBP8.17□□□□□ -1.1
CKS1B-205ENST00000473344 ERC2O15083 957 aa8.17□□□□□ -1.1
CKS1B-205ENST00000473344 PLA2G6O60733 806 aa8.17□□□□□ -1.1
CKS1B-205ENST00000473344 SNAP25P60880 206 aa8.17□□□□□ -1.1
CKS1B-205ENST00000473344 CCDC96Q2M329 555 aa8.17□□□□□ -1.1
CKS1B-205ENST00000473344 MUM1L1Q5H9M0 696 aa8.17□□□□□ -1.1
CKS1B-205ENST00000473344 FAM47CQ5HY64 1035 aa8.17□□□□□ -1.1
CKS1B-205ENST00000473344 TMEM67Q5HYA8 995 aa8.17□□□□□ -1.1
CKS1B-205ENST00000473344 RCSD1Q6JBY9 416 aa8.17□□□□□ -1.1
CKS1B-205ENST00000473344 TAPT1Q6NXT6 567 aa8.17□□□□□ -1.1
CKS1B-205ENST00000473344 LAPTM4BQ86VI4 370 aa8.17□□□□□ -1.1
CKS1B-205ENST00000473344 ANKK1Q8NFD2 765 aa8.17□□□□□ -1.1
CKS1B-205ENST00000473344 NOC4LQ9BVI4 516 aaKnown RBP8.17□□□□□ -1.1
CKS1B-205ENST00000473344 WNT8AQ9H1J5 351 aa8.17□□□□□ -1.1
CKS1B-205ENST00000473344 ALDH8A1Q9H2A2 487 aaPredicted RBP8.17□□□□□ -1.1
CKS1B-205ENST00000473344 RCAN3Q9UKA8 241 aa8.17□□□□□ -1.1
CKS1B-205ENST00000473344 PRR12Q9ULL5 1215 aa8.17□□□□□ -1.1
CKS1B-205ENST00000473344 GRIN2DO15399 1336 aa8.17□□□□□ -1.1
CKS1B-205ENST00000473344 RAD50Q92878 1312 aa8.17□□□□□ -1.1
CKS1B-205ENST00000473344 PTPDC1A2A3K4 754 aa8.16□□□□□ -1.1
CKS1B-205ENST00000473344 SMCHD1A6NHR9 2005 aa8.16□□□□□ -1.1
CKS1B-205ENST00000473344 KIF28PB7ZC32 967 aa8.16□□□□□ -1.1
CKS1B-205ENST00000473344 RANBP6O60518 1105 aaKnown RBP8.16□□□□□ -1.1
CKS1B-205ENST00000473344 TNKSO95271 1327 aa8.16□□□□□ -1.1
CKS1B-205ENST00000473344 ICAM1P05362 532 aa8.16□□□□□ -1.1
CKS1B-205ENST00000473344 CA3P07451 260 aa8.16□□□□□ -1.1
CKS1B-205ENST00000473344 MYL3P08590 195 aa8.16□□□□□ -1.1
CKS1B-205ENST00000473344 CYP2C9P11712 490 aa8.16□□□□□ -1.1
CKS1B-205ENST00000473344 MYOGP15173 224 aa8.16□□□□□ -1.1
CKS1B-205ENST00000473344 PTGS1P23219 599 aa8.16□□□□□ -1.1
CKS1B-205ENST00000473344 DUSP28Q4G0W2 176 aa8.16□□□□□ -1.1
CKS1B-205ENST00000473344 TTC41PQ6P2S7 1318 aa8.16□□□□□ -1.1
CKS1B-205ENST00000473344 DEFB128Q7Z7B8 93 aa8.16□□□□□ -1.1
CKS1B-205ENST00000473344 RETREG2Q8NC44 543 aa8.16□□□□□ -1.1
CKS1B-205ENST00000473344 OR6J1Q8NGC5 347 aa8.16□□□□□ -1.1
CKS1B-205ENST00000473344 SEC62Q99442 399 aaKnown RBP8.16□□□□□ -1.1
CKS1B-205ENST00000473344 MTG1Q9BT17 334 aaPredicted RBP8.16□□□□□ -1.1
CKS1B-205ENST00000473344 WDR11Q9BZH6 1224 aa8.16□□□□□ -1.1
CKS1B-205ENST00000473344 GREB1LQ9C091 1923 aaPredicted RBP8.16□□□□□ -1.1
CKS1B-205ENST00000473344 FTOQ9C0B1 505 aaKnown RBP eCLIP8.16□□□□□ -1.1
CKS1B-205ENST00000473344 TOMM22Q9NS69 142 aa8.16□□□□□ -1.1
CKS1B-205ENST00000473344 TRMT13Q9NUP7 481 aaKnown RBP8.16□□□□□ -1.1
CKS1B-205ENST00000473344 NOD1Q9Y239 953 aa8.16□□□□□ -1.1
CKS1B-205ENST00000473344 DDX49Q9Y6V7 483 aaKnown RBP8.16□□□□□ -1.1
CKS1B-205ENST00000473344 TRANK1O15050 2925 aa8.16□□□□□ -1.1
CKS1B-205ENST00000473344 LOC102724159A0A0B4J2E5 919 aa8.15□□□□□ -1.1
CKS1B-205ENST00000473344 NMT2O60551 498 aa8.15□□□□□ -1.1
CKS1B-205ENST00000473344 CALML3P27482 149 aa8.15□□□□□ -1.1
CKS1B-205ENST00000473344 RFC2P35250 354 aa8.15□□□□□ -1.1
CKS1B-205ENST00000473344 SLC16A2P36021 539 aa8.15□□□□□ -1.1
CKS1B-205ENST00000473344 ALDH5A1P51649 535 aaPredicted RBP8.15□□□□□ -1.1
CKS1B-205ENST00000473344 CHMP4BP1P59074 171 aa8.15□□□□□ -1.1
CKS1B-205ENST00000473344 PURAQ00577 322 aaKnown RBP8.15□□□□□ -1.1
CKS1B-205ENST00000473344 TFF2Q03403 129 aa8.15□□□□□ -1.1
CKS1B-205ENST00000473344 CTDSPL2Q05D32 466 aa8.15□□□□□ -1.1
CKS1B-205ENST00000473344 PDE4DQ08499 809 aa8.15□□□□□ -1.1
CKS1B-205ENST00000473344 BAATQ14032 418 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms