RNA–Protein interactions for RNA: ENST00000472381.5

RPUSD3-213, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 823 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-213ENST00000472381 TTLL4Q14679 1199 aa23.47■■□□□ 1.35
RPUSD3-213ENST00000472381 GRIN2CQ14957 1233 aa23.47■■□□□ 1.35
RPUSD3-213ENST00000472381 MCF2L2Q86YR7 1114 aa23.47■■□□□ 1.35
RPUSD3-213ENST00000472381 PBX4Q9BYU1 374 aa23.47■■□□□ 1.35
RPUSD3-213ENST00000472381 GRXCR1A8MXD5 290 aa23.46■■□□□ 1.35
RPUSD3-213ENST00000472381 QRICH1Q2TAL8 776 aa23.46■■□□□ 1.35
RPUSD3-213ENST00000472381 IFIT1BQ5T764 474 aaKnown RBP23.46■■□□□ 1.35
RPUSD3-213ENST00000472381 WNT8AQ9H1J5 351 aa23.46■■□□□ 1.35
RPUSD3-213ENST00000472381 TRMT13Q9NUP7 481 aaKnown RBP23.46■■□□□ 1.35
RPUSD3-213ENST00000472381 MRPL11Q9Y3B7 192 aaKnown RBP23.46■■□□□ 1.35
RPUSD3-213ENST00000472381 SCN10AQ9Y5Y9 1956 aa23.45■■□□□ 1.35
RPUSD3-213ENST00000472381 A6NJR5 290 aa23.45■■□□□ 1.34
RPUSD3-213ENST00000472381 PBX2P40425 430 aa23.45■■□□□ 1.34
RPUSD3-213ENST00000472381 FAM47CQ5HY64 1035 aa23.45■■□□□ 1.34
RPUSD3-213ENST00000472381 FBXO11Q86XK2 927 aa23.45■■□□□ 1.34
RPUSD3-213ENST00000472381 RPUSD2Q8IZ73 545 aaKnown RBP23.45■■□□□ 1.34
RPUSD3-213ENST00000472381 NSUN6Q8TEA1 469 aaKnown RBP23.45■■□□□ 1.34
RPUSD3-213ENST00000472381 COPS5Q92905 334 aa23.45■■□□□ 1.34
RPUSD3-213ENST00000472381 VAT1LQ9HCJ6 419 aa23.45■■□□□ 1.34
RPUSD3-213ENST00000472381 CXXC1Q9P0U4 656 aaPredicted RBP23.45■■□□□ 1.34
RPUSD3-213ENST00000472381 MSRAQ9UJ68 235 aa23.45■■□□□ 1.34
RPUSD3-213ENST00000472381 RAB30Q15771 203 aa23.44■■□□□ 1.34
RPUSD3-213ENST00000472381 TTC22Q5TAA0 569 aa23.44■■□□□ 1.34
RPUSD3-213ENST00000472381 OTOP2Q7RTS6 562 aa23.44■■□□□ 1.34
RPUSD3-213ENST00000472381 SYTL5Q8TDW5 730 aaPredicted RBP23.44■■□□□ 1.34
RPUSD3-213ENST00000472381 TBC1D5Q92609 795 aa23.44■■□□□ 1.34
RPUSD3-213ENST00000472381 COL25A1Q9BXS0 654 aaPredicted RBP23.44■■□□□ 1.34
RPUSD3-213ENST00000472381 IL25Q9H293 177 aa23.44■■□□□ 1.34
RPUSD3-213ENST00000472381 JMJD4Q9H9V9 463 aa23.44■■□□□ 1.34
RPUSD3-213ENST00000472381 KIAA1217Q5T5P2 1943 aa23.43■■□□□ 1.34
RPUSD3-213ENST00000472381 CYP2C9P11712 490 aa23.43■■□□□ 1.34
RPUSD3-213ENST00000472381 PDE4AP27815 886 aa23.43■■□□□ 1.34
RPUSD3-213ENST00000472381 TRDNQ13061 729 aa23.43■■□□□ 1.34
RPUSD3-213ENST00000472381 NBPF20Q3BBV1 942 aa23.43■■□□□ 1.34
RPUSD3-213ENST00000472381 NFRKBQ6P4R8 1299 aa23.43■■□□□ 1.34
RPUSD3-213ENST00000472381 SCLYQ96I15 445 aa23.43■■□□□ 1.34
RPUSD3-213ENST00000472381 TAAR1Q96RJ0 339 aa23.43■■□□□ 1.34
RPUSD3-213ENST00000472381 IWS1Q96ST2 819 aa23.43■■□□□ 1.34
RPUSD3-213ENST00000472381 RMDN3Q96TC7 470 aa23.43■■□□□ 1.34
RPUSD3-213ENST00000472381 SUPT16HQ9Y5B9 1047 aaKnown RBP23.43■■□□□ 1.34
RPUSD3-213ENST00000472381 GBF1Q92538 1859 aa23.43■■□□□ 1.34
RPUSD3-213ENST00000472381 ARIH2O95376 493 aa23.42■■□□□ 1.34
RPUSD3-213ENST00000472381 GSPT1P15170 499 aaKnown RBP23.42■■□□□ 1.34
RPUSD3-213ENST00000472381 STXBP2Q15833 593 aa23.42■■□□□ 1.34
RPUSD3-213ENST00000472381 SEPT14Q6ZU15 432 aa23.42■■□□□ 1.34
RPUSD3-213ENST00000472381 RUFY2Q8WXA3 655 aa23.42■■□□□ 1.34
RPUSD3-213ENST00000472381 COL20A1Q9P218 1284 aa23.42■■□□□ 1.34
RPUSD3-213ENST00000472381 PRUNE2Q8WUY3 3088 aa23.41■■□□□ 1.34
RPUSD3-213ENST00000472381 PFKMP08237 780 aa23.41■■□□□ 1.34
RPUSD3-213ENST00000472381 PTPN11Q06124 597 aaPredicted RBP23.41■■□□□ 1.34
RPUSD3-213ENST00000472381 ARHGEF16Q5VV41 709 aa23.41■■□□□ 1.34
RPUSD3-213ENST00000472381 GAS2L1Q99501 681 aaPredicted RBP23.41■■□□□ 1.34
RPUSD3-213ENST00000472381 AMNQ9BXJ7 453 aa23.41■■□□□ 1.34
RPUSD3-213ENST00000472381 KLRF2D3W0D1 207 aa23.4■■□□□ 1.34
RPUSD3-213ENST00000472381 CFBP00751 764 aa23.4■■□□□ 1.34
RPUSD3-213ENST00000472381 GH1P01241 217 aa23.4■■□□□ 1.34
RPUSD3-213ENST00000472381 SEC23AQ15436 765 aa23.4■■□□□ 1.34
RPUSD3-213ENST00000472381 CCDC62Q6P9F0 684 aa23.4■■□□□ 1.34
RPUSD3-213ENST00000472381 CYB5R4Q7L1T6 521 aa23.4■■□□□ 1.34
RPUSD3-213ENST00000472381 STAG2Q8N3U4 1231 aa23.4■■□□□ 1.34
RPUSD3-213ENST00000472381 SLC4A7Q9Y6M7 1214 aa23.4■■□□□ 1.34
RPUSD3-213ENST00000472381 U3KPZ7 1027 aaPredicted RBP23.4■■□□□ 1.34
RPUSD3-213ENST00000472381 ZBBXA8MT70 800 aa23.39■■□□□ 1.33
RPUSD3-213ENST00000472381 EIF2AK2P19525 551 aaKnown RBP23.39■■□□□ 1.33
RPUSD3-213ENST00000472381 CHMP4BP1P59074 171 aa23.39■■□□□ 1.33
RPUSD3-213ENST00000472381 AFG1LQ8WV93 481 aa23.39■■□□□ 1.33
RPUSD3-213ENST00000472381 SLC28A3Q9HAS3 691 aa23.39■■□□□ 1.33
RPUSD3-213ENST00000472381 NOD1Q9Y239 953 aa23.39■■□□□ 1.33
RPUSD3-213ENST00000472381 MYO9BQ13459 2157 aa23.39■■□□□ 1.33
RPUSD3-213ENST00000472381 LY6KQ17RY6 165 aa23.38■■□□□ 1.33
RPUSD3-213ENST00000472381 DEFB128Q7Z7B8 93 aa23.38■■□□□ 1.33
RPUSD3-213ENST00000472381 RETREG2Q8NC44 543 aa23.38■■□□□ 1.33
RPUSD3-213ENST00000472381 PPP1R13LQ8WUF5 828 aa23.38■■□□□ 1.33
RPUSD3-213ENST00000472381 NKX2-4Q9H2Z4 354 aa23.38■■□□□ 1.33
RPUSD3-213ENST00000472381 PRDM12Q9H4Q4 367 aa23.38■■□□□ 1.33
RPUSD3-213ENST00000472381 PXMP2Q9NR77 195 aa23.38■■□□□ 1.33
RPUSD3-213ENST00000472381 TANC1Q9C0D5 1861 aa23.38■■□□□ 1.33
RPUSD3-213ENST00000472381 SCN5AQ14524 2016 aa23.38■■□□□ 1.33
RPUSD3-213ENST00000472381 ERICH2A1L162 156 aa23.37■■□□□ 1.33
RPUSD3-213ENST00000472381 PITPNM1O00562 1244 aa23.37■■□□□ 1.33
RPUSD3-213ENST00000472381 ZBTB5O15062 677 aa23.37■■□□□ 1.33
RPUSD3-213ENST00000472381 EIF3JO75822 258 aaKnown RBP23.37■■□□□ 1.33
RPUSD3-213ENST00000472381 MMP3P08254 477 aa23.37■■□□□ 1.33
RPUSD3-213ENST00000472381 RFC2P35250 354 aa23.37■■□□□ 1.33
RPUSD3-213ENST00000472381 HSD17B4P51659 736 aa23.37■■□□□ 1.33
RPUSD3-213ENST00000472381 ARHGAP1Q07960 439 aa23.37■■□□□ 1.33
RPUSD3-213ENST00000472381 BFSP2Q13515 415 aa23.37■■□□□ 1.33
RPUSD3-213ENST00000472381 CHST3Q7LGC8 479 aa23.37■■□□□ 1.33
RPUSD3-213ENST00000472381 RALYLQ86SE5 291 aaKnown RBP23.37■■□□□ 1.33
RPUSD3-213ENST00000472381 MAD2L2Q9UI95 211 aa23.37■■□□□ 1.33
RPUSD3-213ENST00000472381 CHD9Q3L8U1 2897 aa23.36■■□□□ 1.33
RPUSD3-213ENST00000472381 PALM3A6NDB9 673 aaPredicted RBP23.36■■□□□ 1.33
RPUSD3-213ENST00000472381 IFIT3O14879 490 aaKnown RBP23.36■■□□□ 1.33
RPUSD3-213ENST00000472381 NR3C2P08235 984 aa23.36■■□□□ 1.33
RPUSD3-213ENST00000472381 CYP21A2P08686 494 aa23.36■■□□□ 1.33
RPUSD3-213ENST00000472381 ACTN1P12814 892 aa23.36■■□□□ 1.33
RPUSD3-213ENST00000472381 CASTP20810 708 aaKnown RBP23.36■■□□□ 1.33
RPUSD3-213ENST00000472381 CHMLP26374 656 aa23.36■■□□□ 1.33
RPUSD3-213ENST00000472381 TRAF1Q13077 416 aa23.36■■□□□ 1.33
RPUSD3-213ENST00000472381 VWCEQ96DN2 955 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms