RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 DNAJC2Q99543 621 aaKnown RBP4.11□□□□□ -1.75
UBXN4-206ENST00000470687 MENTQ9BUN1 341 aa4.11□□□□□ -1.75
UBXN4-206ENST00000470687 IMPACTQ9P2X3 320 aa4.11□□□□□ -1.75
UBXN4-206ENST00000470687 PLA2G2DQ9UNK4 145 aa4.11□□□□□ -1.75
UBXN4-206ENST00000470687 ZNF451Q9Y4E5 1061 aa4.11□□□□□ -1.75
UBXN4-206ENST00000470687 TDRD9Q8NDG6 1382 aaKnown RBP4.11□□□□□ -1.75
UBXN4-206ENST00000470687 RIMBP3CA6NJZ7 1639 aa4.1□□□□□ -1.75
UBXN4-206ENST00000470687 RIMBP3BA6NNM3 1639 aa4.1□□□□□ -1.75
UBXN4-206ENST00000470687 RIMBP3Q9UFD9 1639 aa4.1□□□□□ -1.75
UBXN4-206ENST00000470687 GJB6O95452 261 aa4.1□□□□□ -1.75
UBXN4-206ENST00000470687 C6P13671 934 aa4.1□□□□□ -1.75
UBXN4-206ENST00000470687 ATF2P15336 505 aa4.1□□□□□ -1.75
UBXN4-206ENST00000470687 ENDOUP21128 410 aaKnown RBP4.1□□□□□ -1.75
UBXN4-206ENST00000470687 RAB33AQ14088 237 aa4.1□□□□□ -1.75
UBXN4-206ENST00000470687 FOXB2Q5VYV0 432 aa4.1□□□□□ -1.75
UBXN4-206ENST00000470687 C6orf15Q6UXA7 325 aaPredicted RBP4.1□□□□□ -1.75
UBXN4-206ENST00000470687 TTC9BQ8N6N2 239 aa4.1□□□□□ -1.75
UBXN4-206ENST00000470687 JMJD8Q96S16 334 aa4.1□□□□□ -1.75
UBXN4-206ENST00000470687 TM9SF2Q99805 663 aa4.1□□□□□ -1.75
UBXN4-206ENST00000470687 KLHL25Q9H0H3 589 aa4.1□□□□□ -1.75
UBXN4-206ENST00000470687 FAM86C1Q9NVL1 165 aa4.1□□□□□ -1.75
UBXN4-206ENST00000470687 SUCOQ9UBS9 1254 aaKnown RBP4.1□□□□□ -1.75
UBXN4-206ENST00000470687 WRNQ14191 1432 aaPredicted RBP eCLIP4.1□□□□□ -1.75
UBXN4-206ENST00000470687 SYNJ2O15056 1496 aa4.1□□□□□ -1.75
UBXN4-206ENST00000470687 SYNJ1O43426 1573 aa4.1□□□□□ -1.75
UBXN4-206ENST00000470687 EIF4G3O43432 1585 aaKnown RBP4.1□□□□□ -1.75
UBXN4-206ENST00000470687 ZNF205O95201 554 aa4.09□□□□□ -1.75
UBXN4-206ENST00000470687 SLPIP03973 132 aa4.09□□□□□ -1.75
UBXN4-206ENST00000470687 ITGAEP38570 1179 aa4.09□□□□□ -1.75
UBXN4-206ENST00000470687 GRIA2P42262 883 aa4.09□□□□□ -1.75
UBXN4-206ENST00000470687 PMS1P54277 932 aaKnown RBP4.09□□□□□ -1.75
UBXN4-206ENST00000470687 GJA9P57773 515 aa4.09□□□□□ -1.75
UBXN4-206ENST00000470687 SPATC1Q76KD6 591 aa4.09□□□□□ -1.75
UBXN4-206ENST00000470687 CARFQ8N187 725 aa4.09□□□□□ -1.75
UBXN4-206ENST00000470687 LILRB2Q8N423 598 aa4.09□□□□□ -1.75
UBXN4-206ENST00000470687 C8orf49Q96NF6 230 aa4.09□□□□□ -1.75
UBXN4-206ENST00000470687 SAMD11Q96NU1 681 aa4.09□□□□□ -1.75
UBXN4-206ENST00000470687 CDADC1Q9BWV3 514 aa4.09□□□□□ -1.75
UBXN4-206ENST00000470687 ST7Q9NRC1 585 aa4.09□□□□□ -1.75
UBXN4-206ENST00000470687 HCFC2Q9Y5Z7 792 aa4.09□□□□□ -1.75
UBXN4-206ENST00000470687 GAPVD1Q14C86 1478 aa4.09□□□□□ -1.75
UBXN4-206ENST00000470687 SRGAP3O43295 1099 aa4.08□□□□□ -1.76
UBXN4-206ENST00000470687 ADCY3O60266 1144 aa4.08□□□□□ -1.76
UBXN4-206ENST00000470687 DIAPH1O60610 1272 aaKnown RBP4.08□□□□□ -1.76
UBXN4-206ENST00000470687 TP53P04637 393 aaPredicted RBP4.08□□□□□ -1.76
UBXN4-206ENST00000470687 DBHP09172 617 aa4.08□□□□□ -1.76
UBXN4-206ENST00000470687 TACR2P21452 398 aa4.08□□□□□ -1.76
UBXN4-206ENST00000470687 GTF2F1P35269 517 aaKnown RBP eCLIP4.08□□□□□ -1.76
UBXN4-206ENST00000470687 GDF5P43026 501 aa4.08□□□□□ -1.76
UBXN4-206ENST00000470687 ZNF445P59923 1031 aa4.08□□□□□ -1.76
UBXN4-206ENST00000470687 MVKQ03426 396 aa4.08□□□□□ -1.76
UBXN4-206ENST00000470687 SF1Q15637 639 aaKnown RBP4.08□□□□□ -1.76
UBXN4-206ENST00000470687 ANKRD39Q53RE8 183 aa4.08□□□□□ -1.76
UBXN4-206ENST00000470687 FBXW10Q5XX13 1052 aa4.08□□□□□ -1.76
UBXN4-206ENST00000470687 DENND5AQ6IQ26 1287 aa4.08□□□□□ -1.76
UBXN4-206ENST00000470687 PAQR3Q6TCH7 311 aa4.08□□□□□ -1.76
UBXN4-206ENST00000470687 FGD5Q6ZNL6 1462 aa4.08□□□□□ -1.76
UBXN4-206ENST00000470687 Q8N1X5 172 aa4.08□□□□□ -1.76
UBXN4-206ENST00000470687 JMYQ8N9B5 988 aa4.08□□□□□ -1.76
UBXN4-206ENST00000470687 TMEM52Q8NDY8 209 aa4.08□□□□□ -1.76
UBXN4-206ENST00000470687 ABCA10Q8WWZ4 1543 aa4.08□□□□□ -1.76
UBXN4-206ENST00000470687 SPATA32Q96LK8 384 aa4.08□□□□□ -1.76
UBXN4-206ENST00000470687 MRIQ9BWK5 157 aa4.08□□□□□ -1.76
UBXN4-206ENST00000470687 RNF38Q9H0F5 515 aa4.08□□□□□ -1.76
UBXN4-206ENST00000470687 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.08□□□□□ -1.76
UBXN4-206ENST00000470687 CHST7Q9NS84 486 aa4.08□□□□□ -1.76
UBXN4-206ENST00000470687 AP5S1Q9NUS5 200 aa4.08□□□□□ -1.76
UBXN4-206ENST00000470687 STRIP2Q9ULQ0 834 aa4.08□□□□□ -1.76
UBXN4-206ENST00000470687 RAD54L2Q9Y4B4 1467 aa4.07□□□□□ -1.76
UBXN4-206ENST00000470687 CYBBP04839 570 aa4.07□□□□□ -1.76
UBXN4-206ENST00000470687 EPHX1P07099 455 aa4.07□□□□□ -1.76
UBXN4-206ENST00000470687 RAG1P15918 1043 aa4.07□□□□□ -1.76
UBXN4-206ENST00000470687 BMP8BP34820 402 aa4.07□□□□□ -1.76
UBXN4-206ENST00000470687 MC3RP41968 323 aa4.07□□□□□ -1.76
UBXN4-206ENST00000470687 DDR2Q16832 855 aa4.07□□□□□ -1.76
UBXN4-206ENST00000470687 RTP2Q5QGT7 225 aa4.07□□□□□ -1.76
UBXN4-206ENST00000470687 GIMAP6Q6P9H5 292 aa4.07□□□□□ -1.76
UBXN4-206ENST00000470687 DPH6Q7L8W6 267 aa4.07□□□□□ -1.76
UBXN4-206ENST00000470687 LOXL4Q96JB6 756 aa4.07□□□□□ -1.76
UBXN4-206ENST00000470687 MRGPRX3Q96LB0 322 aa4.07□□□□□ -1.76
UBXN4-206ENST00000470687 BCL11AQ9H165 835 aa4.07□□□□□ -1.76
UBXN4-206ENST00000470687 FAN1Q9Y2M0 1017 aa4.07□□□□□ -1.76
UBXN4-206ENST00000470687 FHAD1B1AJZ9 1412 aa4.06□□□□□ -1.76
UBXN4-206ENST00000470687 MEIS1O00470 390 aa4.06□□□□□ -1.76
UBXN4-206ENST00000470687 CYR61O00622 381 aa4.06□□□□□ -1.76
UBXN4-206ENST00000470687 IMPDH2P12268 514 aa4.06□□□□□ -1.76
UBXN4-206ENST00000470687 CD247P20963 164 aa4.06□□□□□ -1.76
UBXN4-206ENST00000470687 ACVRL1P37023 503 aa4.06□□□□□ -1.76
UBXN4-206ENST00000470687 CCNFP41002 786 aa4.06□□□□□ -1.76
UBXN4-206ENST00000470687 AUHQ13825 339 aaKnown RBP4.06□□□□□ -1.76
UBXN4-206ENST00000470687 LRRFIP1Q32MZ4 808 aaKnown RBP4.06□□□□□ -1.76
UBXN4-206ENST00000470687 SLC10A6Q3KNW5 377 aa4.06□□□□□ -1.76
UBXN4-206ENST00000470687 CCDC144BQ3MJ40 725 aa4.06□□□□□ -1.76
UBXN4-206ENST00000470687 YOD1Q5VVQ6 348 aaPredicted RBP4.06□□□□□ -1.76
UBXN4-206ENST00000470687 KIAA1211LQ6NV74 962 aa4.06□□□□□ -1.76
UBXN4-206ENST00000470687 JAZF1Q86VZ6 243 aa4.06□□□□□ -1.76
UBXN4-206ENST00000470687 FAM178BQ8IXR5 827 aa4.06□□□□□ -1.76
UBXN4-206ENST00000470687 FAM9AQ8IZU1 332 aaPredicted RBP4.06□□□□□ -1.76
UBXN4-206ENST00000470687 ARMC5Q96C12 935 aa4.06□□□□□ -1.76
UBXN4-206ENST00000470687 C1orf159Q96HA4 380 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms