RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 REXO1Q8N1G1 1221 aaKnown RBP14.47□□□□□ -0.09
SPTLC1-204ENST00000469778 VTA1Q9NP79 307 aa14.47□□□□□ -0.09
SPTLC1-204ENST00000469778 PXMP2Q9NR77 195 aa14.47□□□□□ -0.09
SPTLC1-204ENST00000469778 SMC3Q9UQE7 1217 aa14.47□□□□□ -0.09
SPTLC1-204ENST00000469778 FRMPD4Q14CM0 1322 aa14.46□□□□□ -0.09
SPTLC1-204ENST00000469778 RPTORQ8N122 1335 aa14.46□□□□□ -0.09
SPTLC1-204ENST00000469778 PLXNB2O15031 1838 aa14.46□□□□□ -0.09
SPTLC1-204ENST00000469778 NR3C2P08235 984 aa14.46□□□□□ -0.09
SPTLC1-204ENST00000469778 ELNP15502 786 aa14.46□□□□□ -0.09
SPTLC1-204ENST00000469778 PDCP20941 246 aa14.46□□□□□ -0.09
SPTLC1-204ENST00000469778 HOXA13P31271 388 aaPredicted RBP14.46□□□□□ -0.09
SPTLC1-204ENST00000469778 CLK2P49760 499 aaKnown RBP14.46□□□□□ -0.09
SPTLC1-204ENST00000469778 BECN1Q14457 450 aa14.46□□□□□ -0.09
SPTLC1-204ENST00000469778 STXBP2Q15833 593 aa14.46□□□□□ -0.09
SPTLC1-204ENST00000469778 KCNV1Q6PIU1 500 aa14.46□□□□□ -0.09
SPTLC1-204ENST00000469778 USP17L6PQ6QN14 398 aa14.46□□□□□ -0.09
SPTLC1-204ENST00000469778 ARMCX2Q7L311 632 aa14.46□□□□□ -0.09
SPTLC1-204ENST00000469778 VSIG10LQ86VR7 867 aa14.46□□□□□ -0.09
SPTLC1-204ENST00000469778 BLIDQ8IZY5 108 aa14.46□□□□□ -0.09
SPTLC1-204ENST00000469778 FGD4Q96M96 766 aa14.46□□□□□ -0.09
SPTLC1-204ENST00000469778 TAAR1Q96RJ0 339 aa14.46□□□□□ -0.09
SPTLC1-204ENST00000469778 PHF20Q9BVI0 1012 aa14.46□□□□□ -0.09
SPTLC1-204ENST00000469778 HMX1Q9NP08 348 aaPredicted RBP14.46□□□□□ -0.09
SPTLC1-204ENST00000469778 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.46□□□□□ -0.09
SPTLC1-204ENST00000469778 VPS54Q9P1Q0 977 aa14.46□□□□□ -0.09
SPTLC1-204ENST00000469778 ZNFX1Q9P2E3 1918 aaKnown RBP14.46□□□□□ -0.09
SPTLC1-204ENST00000469778 MAFGO15525 162 aa14.45□□□□□ -0.1
SPTLC1-204ENST00000469778 JAK2O60674 1132 aa14.45□□□□□ -0.1
SPTLC1-204ENST00000469778 SNAI1O95863 264 aaPredicted RBP14.45□□□□□ -0.1
SPTLC1-204ENST00000469778 INHAP05111 366 aa14.45□□□□□ -0.1
SPTLC1-204ENST00000469778 TGFB3P10600 412 aa14.45□□□□□ -0.1
SPTLC1-204ENST00000469778 CCND2P30279 289 aa14.45□□□□□ -0.1
SPTLC1-204ENST00000469778 CCL14Q16627 93 aa14.45□□□□□ -0.1
SPTLC1-204ENST00000469778 COL13A1Q5TAT6 717 aaPredicted RBP14.45□□□□□ -0.1
SPTLC1-204ENST00000469778 PCNX4Q63HM2 1172 aa14.45□□□□□ -0.1
SPTLC1-204ENST00000469778 IQSEC1Q6DN90 963 aa14.45□□□□□ -0.1
SPTLC1-204ENST00000469778 FCHSD1Q86WN1 690 aa14.45□□□□□ -0.1
SPTLC1-204ENST00000469778 FBXO18Q8NFZ0 1043 aa14.45□□□□□ -0.1
SPTLC1-204ENST00000469778 ZNF333Q96JL9 665 aa14.45□□□□□ -0.1
SPTLC1-204ENST00000469778 C8orf76Q96K31 380 aa14.45□□□□□ -0.1
SPTLC1-204ENST00000469778 PDCD2LQ9BRP1 358 aa14.45□□□□□ -0.1
SPTLC1-204ENST00000469778 FLRT1Q9NZU1 646 aa14.45□□□□□ -0.1
SPTLC1-204ENST00000469778 COL20A1Q9P218 1284 aa14.45□□□□□ -0.1
SPTLC1-204ENST00000469778 PCDHA6Q9UN73 950 aa14.45□□□□□ -0.1
SPTLC1-204ENST00000469778 PCDHA8Q9Y5H6 950 aa14.45□□□□□ -0.1
SPTLC1-204ENST00000469778 SMCHD1A6NHR9 2005 aa14.44□□□□□ -0.1
SPTLC1-204ENST00000469778 SEPT4O43236 478 aa14.44□□□□□ -0.1
SPTLC1-204ENST00000469778 PRKAR2AP13861 404 aaKnown RBP14.44□□□□□ -0.1
SPTLC1-204ENST00000469778 TAL1P17542 331 aaPredicted RBP14.44□□□□□ -0.1
SPTLC1-204ENST00000469778 CYP2C19P33261 490 aa14.44□□□□□ -0.1
SPTLC1-204ENST00000469778 USP11P51784 963 aa14.44□□□□□ -0.1
SPTLC1-204ENST00000469778 CACNB2Q08289 660 aaPredicted RBP14.44□□□□□ -0.1
SPTLC1-204ENST00000469778 ACVR2BQ13705 512 aa14.44□□□□□ -0.1
SPTLC1-204ENST00000469778 GNPTABQ3T906 1256 aa14.44□□□□□ -0.1
SPTLC1-204ENST00000469778 KRT25Q7Z3Z0 450 aa14.44□□□□□ -0.1
SPTLC1-204ENST00000469778 CDHR1Q96JP9 859 aa14.44□□□□□ -0.1
SPTLC1-204ENST00000469778 FAM184BQ9ULE4 1060 aa14.44□□□□□ -0.1
SPTLC1-204ENST00000469778 RBM47A0AV96 593 aaKnown RBP14.43□□□□□ -0.1
SPTLC1-204ENST00000469778 MMP1P03956 469 aa14.43□□□□□ -0.1
SPTLC1-204ENST00000469778 HSP90AA1P07900 732 aaKnown RBP14.43□□□□□ -0.1
SPTLC1-204ENST00000469778 CYP3A4P08684 503 aa14.43□□□□□ -0.1
SPTLC1-204ENST00000469778 CYBAP13498 195 aa14.43□□□□□ -0.1
SPTLC1-204ENST00000469778 SREBF1P36956 1147 aa14.43□□□□□ -0.1
SPTLC1-204ENST00000469778 PGM5Q15124 567 aa14.43□□□□□ -0.1
SPTLC1-204ENST00000469778 SH3TC2Q8TF17 1288 aa14.43□□□□□ -0.1
SPTLC1-204ENST00000469778 SCFD2Q8WU76 684 aa14.43□□□□□ -0.1
SPTLC1-204ENST00000469778 NAP1L4Q99733 375 aaKnown RBP14.43□□□□□ -0.1
SPTLC1-204ENST00000469778 TMEM106CQ9BVX2 250 aa14.43□□□□□ -0.1
SPTLC1-204ENST00000469778 Q9Y3F1 56 aa14.43□□□□□ -0.1
SPTLC1-204ENST00000469778 ASTN1O14525 1302 aa14.42□□□□□ -0.1
SPTLC1-204ENST00000469778 M0R2N6 131 aa14.42□□□□□ -0.1
SPTLC1-204ENST00000469778 NKRFO15226 690 aaKnown RBP eCLIP14.42□□□□□ -0.1
SPTLC1-204ENST00000469778 PPFIA3O75145 1194 aa14.42□□□□□ -0.1
SPTLC1-204ENST00000469778 GJB1P08034 283 aa14.42□□□□□ -0.1
SPTLC1-204ENST00000469778 ZNF865P0CJ78 1059 aaPredicted RBP14.42□□□□□ -0.1
SPTLC1-204ENST00000469778 AKR1A1P14550 325 aa14.42□□□□□ -0.1
SPTLC1-204ENST00000469778 EIF2AK2P19525 551 aaKnown RBP14.42□□□□□ -0.1
SPTLC1-204ENST00000469778 GJB2P29033 226 aa14.42□□□□□ -0.1
SPTLC1-204ENST00000469778 KRT2P35908 639 aa14.42□□□□□ -0.1
SPTLC1-204ENST00000469778 KRT40Q6A162 431 aa14.42□□□□□ -0.1
SPTLC1-204ENST00000469778 NIPA1Q7RTP0 329 aa14.42□□□□□ -0.1
SPTLC1-204ENST00000469778 NLRX1Q86UT6 975 aa14.42□□□□□ -0.1
SPTLC1-204ENST00000469778 AIFM3Q96NN9 605 aa14.42□□□□□ -0.1
SPTLC1-204ENST00000469778 PURBQ96QR8 312 aaKnown RBP14.42□□□□□ -0.1
SPTLC1-204ENST00000469778 KATNBL1Q9H079 304 aa14.42□□□□□ -0.1
SPTLC1-204ENST00000469778 RNF208Q9H0X6 261 aa14.42□□□□□ -0.1
SPTLC1-204ENST00000469778 FOXP1Q9H334 677 aaPredicted RBP14.42□□□□□ -0.1
SPTLC1-204ENST00000469778 PAK6Q9NQU5 681 aaPredicted RBP14.42□□□□□ -0.1
SPTLC1-204ENST00000469778 CCDC194A0A1B0GVG4 234 aa14.41□□□□□ -0.1
SPTLC1-204ENST00000469778 CCL5P13501 91 aa14.41□□□□□ -0.1
SPTLC1-204ENST00000469778 ICAM3P32942 547 aa14.41□□□□□ -0.1
SPTLC1-204ENST00000469778 TTLL4Q14679 1199 aa14.41□□□□□ -0.1
SPTLC1-204ENST00000469778 NPY5RQ15761 445 aa14.41□□□□□ -0.1
SPTLC1-204ENST00000469778 UBE2SQ16763 222 aa14.41□□□□□ -0.1
SPTLC1-204ENST00000469778 JAKMIP3Q5VZ66 844 aa14.41□□□□□ -0.1
SPTLC1-204ENST00000469778 LARP1BQ659C4 914 aaKnown RBP14.41□□□□□ -0.1
SPTLC1-204ENST00000469778 TNS4Q8IZW8 715 aa14.41□□□□□ -0.1
SPTLC1-204ENST00000469778 GIMAP8Q8ND71 665 aaPredicted RBP14.41□□□□□ -0.1
SPTLC1-204ENST00000469778 CRYGNQ8WXF5 182 aa14.41□□□□□ -0.1
SPTLC1-204ENST00000469778 ANO3Q9BYT9 981 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 257 ms