RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 GNEQ9Y223 722 aaKnown RBP11.24□□□□□ -0.61
SRRT-208ENST00000469602 CNTNAP5Q8WYK1 1306 aa11.24□□□□□ -0.61
SRRT-208ENST00000469602 NID2Q14112 1375 aa11.24□□□□□ -0.61
SRRT-208ENST00000469602 CCDC196A0A1B0GTZ2 297 aa11.23□□□□□ -0.61
SRRT-208ENST00000469602 hCG_1642624A0A1W2PR95 340 aa11.23□□□□□ -0.61
SRRT-208ENST00000469602 RBM47A0AV96 593 aaKnown RBP11.23□□□□□ -0.61
SRRT-208ENST00000469602 H0YGN5 161 aa11.23□□□□□ -0.61
SRRT-208ENST00000469602 C6orf222P0C671 652 aaPredicted RBP11.23□□□□□ -0.61
SRRT-208ENST00000469602 SMPD1P17405 629 aa11.23□□□□□ -0.61
SRRT-208ENST00000469602 EIF2AK2P19525 551 aaKnown RBP11.23□□□□□ -0.61
SRRT-208ENST00000469602 CST5P28325 142 aaPredicted RBP11.23□□□□□ -0.61
SRRT-208ENST00000469602 CDC27P30260 824 aa11.23□□□□□ -0.61
SRRT-208ENST00000469602 EVCP57679 992 aa11.23□□□□□ -0.61
SRRT-208ENST00000469602 ANAPC15P60006 121 aa11.23□□□□□ -0.61
SRRT-208ENST00000469602 NKX3-2P78367 333 aa11.23□□□□□ -0.61
SRRT-208ENST00000469602 FUT2Q10981 343 aa11.23□□□□□ -0.61
SRRT-208ENST00000469602 LRRC26Q2I0M4 334 aa11.23□□□□□ -0.61
SRRT-208ENST00000469602 ARHGEF16Q5VV41 709 aa11.23□□□□□ -0.61
SRRT-208ENST00000469602 CCSAPQ6IQ19 270 aaPredicted RBP11.23□□□□□ -0.61
SRRT-208ENST00000469602 TLK2Q86UE8 772 aa11.23□□□□□ -0.61
SRRT-208ENST00000469602 FERMT2Q96AC1 680 aa11.23□□□□□ -0.61
SRRT-208ENST00000469602 TSEN34Q9BSV6 310 aaKnown RBP11.23□□□□□ -0.61
SRRT-208ENST00000469602 WDR11Q9BZH6 1224 aa11.23□□□□□ -0.61
SRRT-208ENST00000469602 UPF3BQ9BZI7 483 aaKnown RBP11.23□□□□□ -0.61
SRRT-208ENST00000469602 NR2E3Q9Y5X4 410 aa11.23□□□□□ -0.61
SRRT-208ENST00000469602 TRIOBPQ9H2D6 2365 aa11.23□□□□□ -0.61
SRRT-208ENST00000469602 A0A1W2PQ45 241 aaPredicted RBP11.22□□□□□ -0.61
SRRT-208ENST00000469602 A0A1W2PQY0 241 aa11.22□□□□□ -0.61
SRRT-208ENST00000469602 MYADML2A6NDP7 307 aa11.22□□□□□ -0.61
SRRT-208ENST00000469602 MOXD2PA6NHM9 499 aa11.22□□□□□ -0.61
SRRT-208ENST00000469602 PIK3CDO00329 1044 aa11.22□□□□□ -0.61
SRRT-208ENST00000469602 CTAGE5O15320 804 aa11.22□□□□□ -0.61
SRRT-208ENST00000469602 EIF3JO75822 258 aaKnown RBP11.22□□□□□ -0.61
SRRT-208ENST00000469602 SEC24BO95487 1268 aa11.22□□□□□ -0.61
SRRT-208ENST00000469602 NR3C2P08235 984 aa11.22□□□□□ -0.61
SRRT-208ENST00000469602 ADD1P35611 737 aaKnown RBP11.22□□□□□ -0.61
SRRT-208ENST00000469602 ACLYP53396 1101 aa11.22□□□□□ -0.61
SRRT-208ENST00000469602 ATN1P54259 1190 aaPredicted RBP11.22□□□□□ -0.61
SRRT-208ENST00000469602 IRX5P78411 483 aaPredicted RBP11.22□□□□□ -0.61
SRRT-208ENST00000469602 TOB2Q14106 344 aaPredicted RBP11.22□□□□□ -0.61
SRRT-208ENST00000469602 STXBP2Q15833 593 aa11.22□□□□□ -0.61
SRRT-208ENST00000469602 KCNA10Q16322 511 aa11.22□□□□□ -0.61
SRRT-208ENST00000469602 DUSP28Q4G0W2 176 aa11.22□□□□□ -0.61
SRRT-208ENST00000469602 GNASQ5JWF2 1037 aa11.22□□□□□ -0.61
SRRT-208ENST00000469602 TMEM63BQ5T3F8 832 aa11.22□□□□□ -0.61
SRRT-208ENST00000469602 HEATR3Q7Z4Q2 680 aa11.22□□□□□ -0.61
SRRT-208ENST00000469602 FCHSD1Q86WN1 690 aa11.22□□□□□ -0.61
SRRT-208ENST00000469602 C7orf61Q8IZ16 206 aa11.22□□□□□ -0.61
SRRT-208ENST00000469602 PCSK9Q8NBP7 692 aaKnown RBP11.22□□□□□ -0.61
SRRT-208ENST00000469602 SCFD2Q8WU76 684 aa11.22□□□□□ -0.61
SRRT-208ENST00000469602 PDCD2LQ9BRP1 358 aa11.22□□□□□ -0.61
SRRT-208ENST00000469602 AP5M1Q9H0R1 490 aa11.22□□□□□ -0.61
SRRT-208ENST00000469602 Q9Y3F1 56 aa11.22□□□□□ -0.61
SRRT-208ENST00000469602 V9GY48 417 aaPredicted RBP11.22□□□□□ -0.61
SRRT-208ENST00000469602 MYH7BA7E2Y1 1941 aa11.21□□□□□ -0.61
SRRT-208ENST00000469602 FRMPD4Q14CM0 1322 aa11.21□□□□□ -0.61
SRRT-208ENST00000469602 DYNC1LI2O43237 492 aaPredicted RBP11.21□□□□□ -0.61
SRRT-208ENST00000469602 PTGS1P23219 599 aa11.21□□□□□ -0.61
SRRT-208ENST00000469602 PDIA3P30101 505 aaKnown RBP11.21□□□□□ -0.61
SRRT-208ENST00000469602 SNX17Q15036 470 aa11.21□□□□□ -0.61
SRRT-208ENST00000469602 FSCN1Q16658 493 aaKnown RBP11.21□□□□□ -0.61
SRRT-208ENST00000469602 C1orf53Q5VUE5 145 aa11.21□□□□□ -0.61
SRRT-208ENST00000469602 SLC39A5Q6ZMH5 540 aa11.21□□□□□ -0.61
SRRT-208ENST00000469602 VSIG10LQ86VR7 867 aa11.21□□□□□ -0.61
SRRT-208ENST00000469602 GPKOWQ92917 476 aaPredicted RBP eCLIP11.21□□□□□ -0.61
SRRT-208ENST00000469602 CUL5Q93034 780 aa11.21□□□□□ -0.61
SRRT-208ENST00000469602 IL17RAQ96F46 866 aa11.21□□□□□ -0.61
SRRT-208ENST00000469602 PSTPIP2Q9H939 334 aa11.21□□□□□ -0.61
SRRT-208ENST00000469602 PDRG1Q9NUG6 133 aa11.21□□□□□ -0.61
SRRT-208ENST00000469602 hCG_1984214I3L0E3 225 aa11.2□□□□□ -0.62
SRRT-208ENST00000469602 MEIS2O14770 477 aa11.2□□□□□ -0.62
SRRT-208ENST00000469602 NKRFO15226 690 aaKnown RBP eCLIP11.2□□□□□ -0.62
SRRT-208ENST00000469602 ASGR1P07306 291 aa11.2□□□□□ -0.62
SRRT-208ENST00000469602 TXNP10599 105 aaKnown RBP11.2□□□□□ -0.62
SRRT-208ENST00000469602 MYCLP12524 364 aaPredicted RBP11.2□□□□□ -0.62
SRRT-208ENST00000469602 CCND2P30279 289 aa11.2□□□□□ -0.62
SRRT-208ENST00000469602 BEX3Q00994 111 aa11.2□□□□□ -0.62
SRRT-208ENST00000469602 TTLL4Q14679 1199 aa11.2□□□□□ -0.62
SRRT-208ENST00000469602 PGM5Q15124 567 aa11.2□□□□□ -0.62
SRRT-208ENST00000469602 C8orf34Q49A92 452 aa11.2□□□□□ -0.62
SRRT-208ENST00000469602 WWC2Q6AWC2 1192 aa11.2□□□□□ -0.62
SRRT-208ENST00000469602 PPP1R18Q6NYC8 613 aa11.2□□□□□ -0.62
SRRT-208ENST00000469602 USP17L6PQ6QN14 398 aa11.2□□□□□ -0.62
SRRT-208ENST00000469602 SEPT14Q6ZU15 432 aa11.2□□□□□ -0.62
SRRT-208ENST00000469602 ZNF713Q8N859 430 aaPredicted RBP11.2□□□□□ -0.62
SRRT-208ENST00000469602 IL31RAQ8NI17 732 aa11.2□□□□□ -0.62
SRRT-208ENST00000469602 SMARCC2Q8TAQ2 1214 aa11.2□□□□□ -0.62
SRRT-208ENST00000469602 GLT1D1Q96MS3 346 aa11.2□□□□□ -0.62
SRRT-208ENST00000469602 ELP1O95163 1332 aa11.19□□□□□ -0.62
SRRT-208ENST00000469602 ZEB2O60315 1214 aa11.19□□□□□ -0.62
SRRT-208ENST00000469602 RGS20O76081 388 aa11.19□□□□□ -0.62
SRRT-208ENST00000469602 ARIH2O95376 493 aa11.19□□□□□ -0.62
SRRT-208ENST00000469602 NAPAP54920 295 aa11.19□□□□□ -0.62
SRRT-208ENST00000469602 RTP1P59025 263 aa11.19□□□□□ -0.62
SRRT-208ENST00000469602 CCT2P78371 535 aaKnown RBP11.19□□□□□ -0.62
SRRT-208ENST00000469602 NTRK3Q16288 839 aa11.19□□□□□ -0.62
SRRT-208ENST00000469602 PFKFB3Q16875 520 aaPredicted RBP11.19□□□□□ -0.62
SRRT-208ENST00000469602 TRIM60Q495X7 471 aa11.19□□□□□ -0.62
SRRT-208ENST00000469602 TYW1BQ6NUM6 668 aa11.19□□□□□ -0.62
SRRT-208ENST00000469602 CCDC62Q6P9F0 684 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms