RNA–Protein interactions for RNA: ENST00000469006.1

SNED1-209, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 963 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-209ENST00000469006 SCFD2Q8WU76 684 aa17.1■□□□□ 0.33
SNED1-209ENST00000469006 COPS5Q92905 334 aa17.1■□□□□ 0.33
SNED1-209ENST00000469006 MPHOSPH6Q99547 160 aaKnown RBP17.1■□□□□ 0.33
SNED1-209ENST00000469006 FTOQ9C0B1 505 aaKnown RBP eCLIP17.1■□□□□ 0.33
SNED1-209ENST00000469006 KPNA6O60684 536 aa17.09■□□□□ 0.33
SNED1-209ENST00000469006 IQCF3P0C7M6 154 aa17.09■□□□□ 0.33
SNED1-209ENST00000469006 EDNRBP24530 442 aa17.09■□□□□ 0.33
SNED1-209ENST00000469006 RPS6P62753 249 aaKnown RBP17.09■□□□□ 0.33
SNED1-209ENST00000469006 KRT40Q6A162 431 aa17.09■□□□□ 0.33
SNED1-209ENST00000469006 HERC6Q8IVU3 1022 aa17.09■□□□□ 0.33
SNED1-209ENST00000469006 PHOSPHO2Q8TCD6 241 aa17.09■□□□□ 0.33
SNED1-209ENST00000469006 ARNTL2Q8WYA1 636 aa17.09■□□□□ 0.33
SNED1-209ENST00000469006 NOD1Q9Y239 953 aa17.09■□□□□ 0.33
SNED1-209ENST00000469006 SALL3Q9BXA9 1300 aa17.09■□□□□ 0.33
SNED1-209ENST00000469006 WDR19Q8NEZ3 1342 aa17.08■□□□□ 0.32
SNED1-209ENST00000469006 A6NJR5 290 aa17.08■□□□□ 0.32
SNED1-209ENST00000469006 PDHBP11177 359 aa17.08■□□□□ 0.32
SNED1-209ENST00000469006 CHMP4BP1P59074 171 aa17.08■□□□□ 0.32
SNED1-209ENST00000469006 TAP1Q03518 808 aa17.08■□□□□ 0.32
SNED1-209ENST00000469006 PTPN11Q06124 597 aaPredicted RBP17.08■□□□□ 0.32
SNED1-209ENST00000469006 BFSP2Q13515 415 aa17.08■□□□□ 0.32
SNED1-209ENST00000469006 ALX1Q15699 326 aa17.08■□□□□ 0.32
SNED1-209ENST00000469006 DNERQ8NFT8 737 aa17.08■□□□□ 0.32
SNED1-209ENST00000469006 TCP11L1Q9NUJ3 509 aa17.08■□□□□ 0.32
SNED1-209ENST00000469006 PNMA2Q9UL42 364 aa17.08■□□□□ 0.32
SNED1-209ENST00000469006 SUPT16HQ9Y5B9 1047 aaKnown RBP17.08■□□□□ 0.32
SNED1-209ENST00000469006 COL4A4P53420 1690 aaPredicted RBP17.07■□□□□ 0.32
SNED1-209ENST00000469006 ARIH2O95376 493 aa17.07■□□□□ 0.32
SNED1-209ENST00000469006 TXNP10599 105 aaKnown RBP17.07■□□□□ 0.32
SNED1-209ENST00000469006 PLA2G5P39877 138 aa17.07■□□□□ 0.32
SNED1-209ENST00000469006 ZNF543Q08ER8 600 aa17.07■□□□□ 0.32
SNED1-209ENST00000469006 EVI5LQ96CN4 794 aa17.07■□□□□ 0.32
SNED1-209ENST00000469006 C1QTNF1Q9BXJ1 281 aa17.07■□□□□ 0.32
SNED1-209ENST00000469006 HELLSQ9NRZ9 838 aa17.07■□□□□ 0.32
SNED1-209ENST00000469006 TET1Q8NFU7 2136 aa17.06■□□□□ 0.32
SNED1-209ENST00000469006 A0A0D9SFI3 127 aa17.06■□□□□ 0.32
SNED1-209ENST00000469006 KIF28PB7ZC32 967 aa17.06■□□□□ 0.32
SNED1-209ENST00000469006 BAIAP3O94812 1187 aa17.06■□□□□ 0.32
SNED1-209ENST00000469006 FGAP02671 866 aa17.06■□□□□ 0.32
SNED1-209ENST00000469006 HDAC1Q13547 482 aaPredicted RBP17.06■□□□□ 0.32
SNED1-209ENST00000469006 USH1GQ495M9 461 aa17.06■□□□□ 0.32
SNED1-209ENST00000469006 SPRED2Q7Z698 418 aa17.06■□□□□ 0.32
SNED1-209ENST00000469006 FAM227BQ96M60 508 aa17.06■□□□□ 0.32
SNED1-209ENST00000469006 COG5Q9UP83 839 aa17.06■□□□□ 0.32
SNED1-209ENST00000469006 ZMYM6O95789 1325 aa17.05■□□□□ 0.32
SNED1-209ENST00000469006 B4DLN1 442 aa17.05■□□□□ 0.32
SNED1-209ENST00000469006 TLL1O43897 1013 aa17.05■□□□□ 0.32
SNED1-209ENST00000469006 SNHG28P0DPA3 235 aa17.05■□□□□ 0.32
SNED1-209ENST00000469006 KCNJ6P48051 423 aa17.05■□□□□ 0.32
SNED1-209ENST00000469006 MRPL12P52815 198 aaKnown RBP17.05■□□□□ 0.32
SNED1-209ENST00000469006 HAND2P61296 217 aa17.05■□□□□ 0.32
SNED1-209ENST00000469006 GRB10Q13322 594 aa17.05■□□□□ 0.32
SNED1-209ENST00000469006 PTGISQ16647 500 aa17.05■□□□□ 0.32
SNED1-209ENST00000469006 CCDC155Q8N6L0 562 aa17.05■□□□□ 0.32
SNED1-209ENST00000469006 FAM122AQ96E09 287 aa17.05■□□□□ 0.32
SNED1-209ENST00000469006 PTPRSQ13332 1948 aa17.05■□□□□ 0.32
SNED1-209ENST00000469006 MMP3P08254 477 aa17.04■□□□□ 0.32
SNED1-209ENST00000469006 WDR5P61964 334 aaKnown RBP17.04■□□□□ 0.32
SNED1-209ENST00000469006 CAGE1Q8TC20 777 aa17.04■□□□□ 0.32
SNED1-209ENST00000469006 AFAP1L1Q8TED9 768 aa17.04■□□□□ 0.32
SNED1-209ENST00000469006 AFG1LQ8WV93 481 aa17.04■□□□□ 0.32
SNED1-209ENST00000469006 LCHNA4D1U4 455 aa17.03■□□□□ 0.32
SNED1-209ENST00000469006 GH1P01241 217 aa17.03■□□□□ 0.32
SNED1-209ENST00000469006 GOLGA8HP0CJ92 632 aa17.03■□□□□ 0.32
SNED1-209ENST00000469006 HSPD1P10809 573 aaKnown RBP17.03■□□□□ 0.32
SNED1-209ENST00000469006 ARHGAP1Q07960 439 aa17.03■□□□□ 0.32
SNED1-209ENST00000469006 MCMDC2Q4G0Z9 681 aa17.03■□□□□ 0.32
SNED1-209ENST00000469006 GDF6Q6KF10 455 aaPredicted RBP17.03■□□□□ 0.32
SNED1-209ENST00000469006 CCDC62Q6P9F0 684 aa17.03■□□□□ 0.32
SNED1-209ENST00000469006 TMCO2Q7Z6W1 182 aaPredicted RBP17.03■□□□□ 0.32
SNED1-209ENST00000469006 ZNF589Q86UQ0 364 aaPredicted RBP17.03■□□□□ 0.32
SNED1-209ENST00000469006 TBC1D10CQ8IV04 446 aa17.03■□□□□ 0.32
SNED1-209ENST00000469006 HLA-CQ95604 372 aa17.03■□□□□ 0.32
SNED1-209ENST00000469006 TTC14Q96N46 770 aa17.03■□□□□ 0.32
SNED1-209ENST00000469006 CTAGE1Q96RT6 745 aa17.03■□□□□ 0.32
SNED1-209ENST00000469006 CPVLQ9H3G5 476 aa17.03■□□□□ 0.32
SNED1-209ENST00000469006 ZBTB47Q9UFB7 747 aaPredicted RBP17.03■□□□□ 0.32
SNED1-209ENST00000469006 LPXNO60711 386 aa17.02■□□□□ 0.32
SNED1-209ENST00000469006 SELPP16109 830 aa17.02■□□□□ 0.32
SNED1-209ENST00000469006 DEFB103AP81534 67 aa17.02■□□□□ 0.32
SNED1-209ENST00000469006 GPATCH4Q5T3I0 446 aaKnown RBP17.02■□□□□ 0.32
SNED1-209ENST00000469006 ANKRD45Q5TZF3 282 aa17.02■□□□□ 0.32
SNED1-209ENST00000469006 MFSD6Q6ZSS7 791 aa17.02■□□□□ 0.32
SNED1-209ENST00000469006 SEPT14Q6ZU15 432 aa17.02■□□□□ 0.32
SNED1-209ENST00000469006 LRRC8DQ7L1W4 858 aa17.02■□□□□ 0.32
SNED1-209ENST00000469006 SESTD1Q86VW0 696 aa17.02■□□□□ 0.32
SNED1-209ENST00000469006 RGS22Q8NE09 1264 aa17.02■□□□□ 0.32
SNED1-209ENST00000469006 EXOC6Q8TAG9 804 aa17.02■□□□□ 0.32
SNED1-209ENST00000469006 GDPD5Q8WTR4 605 aa17.02■□□□□ 0.32
SNED1-209ENST00000469006 DHX38Q92620 1227 aaKnown RBP17.02■□□□□ 0.32
SNED1-209ENST00000469006 TRIP12Q14669 1992 aaPredicted RBP17.02■□□□□ 0.31
SNED1-209ENST00000469006 NEDD4P46934 1319 aa17.01■□□□□ 0.31
SNED1-209ENST00000469006 CCDC171Q6TFL3 1326 aa17.01■□□□□ 0.31
SNED1-209ENST00000469006 BRWD1Q9NSI6 2320 aa17.01■□□□□ 0.31
SNED1-209ENST00000469006 PCP11498 1178 aaKnown RBP17.01■□□□□ 0.31
SNED1-209ENST00000469006 PDE1AP54750 535 aa17.01■□□□□ 0.31
SNED1-209ENST00000469006 NMIQ13287 307 aaPredicted RBP17.01■□□□□ 0.31
SNED1-209ENST00000469006 GPNMBQ14956 572 aa17.01■□□□□ 0.31
SNED1-209ENST00000469006 CDC37Q16543 378 aaPredicted RBP17.01■□□□□ 0.31
SNED1-209ENST00000469006 LY6KQ17RY6 165 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms