RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 TMEM87BQ96K49 555 aa12.79□□□□□ -0.36
PRPF3-203ENST00000467514 UIMC1Q96RL1 719 aa12.79□□□□□ -0.36
PRPF3-203ENST00000467514 AP5M1Q9H0R1 490 aa12.79□□□□□ -0.36
PRPF3-203ENST00000467514 KANSL2Q9H9L4 492 aa12.79□□□□□ -0.36
PRPF3-203ENST00000467514 BRPF3Q9ULD4 1205 aa12.79□□□□□ -0.36
PRPF3-203ENST00000467514 UMODL1Q5DID0 1318 aa12.79□□□□□ -0.36
PRPF3-203ENST00000467514 PRRC2BQ5JSZ5 2229 aaKnown RBP12.78□□□□□ -0.36
PRPF3-203ENST00000467514 RFXAPO00287 272 aa12.78□□□□□ -0.36
PRPF3-203ENST00000467514 KDM4AO75164 1064 aa12.78□□□□□ -0.36
PRPF3-203ENST00000467514 CABYRO75952 493 aa12.78□□□□□ -0.36
PRPF3-203ENST00000467514 CA3P07451 260 aa12.78□□□□□ -0.36
PRPF3-203ENST00000467514 ACTN1P12814 892 aa12.78□□□□□ -0.36
PRPF3-203ENST00000467514 CDK8P49336 464 aa12.78□□□□□ -0.36
PRPF3-203ENST00000467514 TNFAIP2Q03169 654 aa12.78□□□□□ -0.36
PRPF3-203ENST00000467514 APOBRQ0VD83 1088 aa12.78□□□□□ -0.36
PRPF3-203ENST00000467514 ITGA7Q13683 1181 aa12.78□□□□□ -0.36
PRPF3-203ENST00000467514 MAMDC4Q6UXC1 1216 aa12.78□□□□□ -0.36
PRPF3-203ENST00000467514 DEFB128Q7Z7B8 93 aa12.78□□□□□ -0.36
PRPF3-203ENST00000467514 ZNF467Q7Z7K2 595 aaPredicted RBP12.78□□□□□ -0.36
PRPF3-203ENST00000467514 SGMS1Q86VZ5 419 aa12.78□□□□□ -0.36
PRPF3-203ENST00000467514 CCDC83Q8IWF9 413 aa12.78□□□□□ -0.36
PRPF3-203ENST00000467514 ARNTL2Q8WYA1 636 aa12.78□□□□□ -0.36
PRPF3-203ENST00000467514 HLA-CQ95604 372 aa12.78□□□□□ -0.36
PRPF3-203ENST00000467514 SCLYQ96I15 445 aa12.78□□□□□ -0.36
PRPF3-203ENST00000467514 NUP88Q99567 741 aaPredicted RBP12.78□□□□□ -0.36
PRPF3-203ENST00000467514 UPF3AQ9H1J1 476 aaKnown RBP12.78□□□□□ -0.36
PRPF3-203ENST00000467514 LY9Q9HBG7 655 aa12.78□□□□□ -0.36
PRPF3-203ENST00000467514 HOMER2Q9NSB8 354 aa12.78□□□□□ -0.36
PRPF3-203ENST00000467514 ADAMTS5Q9UNA0 930 aa12.78□□□□□ -0.36
PRPF3-203ENST00000467514 ZDHHC9Q9Y397 364 aa12.78□□□□□ -0.36
PRPF3-203ENST00000467514 TRANK1O15050 2925 aa12.77□□□□□ -0.36
PRPF3-203ENST00000467514 ADCY6O43306 1168 aa12.77□□□□□ -0.37
PRPF3-203ENST00000467514 CD4P01730 458 aa12.77□□□□□ -0.37
PRPF3-203ENST00000467514 LIFRP42702 1097 aa12.77□□□□□ -0.37
PRPF3-203ENST00000467514 SEC23AQ15436 765 aa12.77□□□□□ -0.37
PRPF3-203ENST00000467514 CLEC17AQ6ZS10 378 aa12.77□□□□□ -0.37
PRPF3-203ENST00000467514 TLK2Q86UE8 772 aa12.77□□□□□ -0.37
PRPF3-203ENST00000467514 CCDC144CPQ8IYA2 1237 aa12.77□□□□□ -0.37
PRPF3-203ENST00000467514 ESR2Q92731 530 aa12.77□□□□□ -0.37
PRPF3-203ENST00000467514 KIFC2Q96AC6 838 aa12.77□□□□□ -0.37
PRPF3-203ENST00000467514 SENP2Q9HC62 589 aa12.77□□□□□ -0.37
PRPF3-203ENST00000467514 FBXO40Q9UH90 709 aa12.77□□□□□ -0.37
PRPF3-203ENST00000467514 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.77□□□□□ -0.37
PRPF3-203ENST00000467514 MTCH2Q9Y6C9 303 aa12.77□□□□□ -0.37
PRPF3-203ENST00000467514 KIF28PB7ZC32 967 aa12.76□□□□□ -0.37
PRPF3-203ENST00000467514 CTDNEP1O95476 244 aa12.76□□□□□ -0.37
PRPF3-203ENST00000467514 BRD1O95696 1058 aa12.76□□□□□ -0.37
PRPF3-203ENST00000467514 NUCB2P80303 420 aa12.76□□□□□ -0.37
PRPF3-203ENST00000467514 FGD1P98174 961 aa12.76□□□□□ -0.37
PRPF3-203ENST00000467514 SCRN1Q12765 414 aa12.76□□□□□ -0.37
PRPF3-203ENST00000467514 FSCN1Q16658 493 aaKnown RBP12.76□□□□□ -0.37
PRPF3-203ENST00000467514 CSPP1Q1MSJ5 1256 aa12.76□□□□□ -0.37
PRPF3-203ENST00000467514 SIAH1Q8IUQ4 282 aa12.76□□□□□ -0.37
PRPF3-203ENST00000467514 PRPF38AQ8NAV1 312 aaKnown RBP12.76□□□□□ -0.37
PRPF3-203ENST00000467514 REPS2Q8NFH8 660 aa12.76□□□□□ -0.37
PRPF3-203ENST00000467514 SMARCC2Q8TAQ2 1214 aa12.76□□□□□ -0.37
PRPF3-203ENST00000467514 LLPHQ9BRT6 129 aaKnown RBP12.76□□□□□ -0.37
PRPF3-203ENST00000467514 NOC4LQ9BVI4 516 aaKnown RBP12.76□□□□□ -0.37
PRPF3-203ENST00000467514 TRPV6Q9H1D0 765 aa12.76□□□□□ -0.37
PRPF3-203ENST00000467514 RAVER2Q9HCJ3 691 aaKnown RBP12.76□□□□□ -0.37
PRPF3-203ENST00000467514 RIPK3Q9Y572 518 aa12.76□□□□□ -0.37
PRPF3-203ENST00000467514 NID2Q14112 1375 aa12.76□□□□□ -0.37
PRPF3-203ENST00000467514 KLF18A0A0U1RQI7 1052 aa12.75□□□□□ -0.37
PRPF3-203ENST00000467514 DYNC1LI2O43237 492 aaPredicted RBP12.75□□□□□ -0.37
PRPF3-203ENST00000467514 B4GALT4O60513 344 aa12.75□□□□□ -0.37
PRPF3-203ENST00000467514 SLC3A2P08195 630 aaKnown RBP12.75□□□□□ -0.37
PRPF3-203ENST00000467514 PFKMP08237 780 aa12.75□□□□□ -0.37
PRPF3-203ENST00000467514 SSTR3P32745 418 aaPredicted RBP12.75□□□□□ -0.37
PRPF3-203ENST00000467514 IKQ13123 557 aaPredicted RBP12.75□□□□□ -0.37
PRPF3-203ENST00000467514 PKP1Q13835 747 aa12.75□□□□□ -0.37
PRPF3-203ENST00000467514 KRT40Q6A162 431 aa12.75□□□□□ -0.37
PRPF3-203ENST00000467514 MUC6Q6W4X9 2439 aa12.75□□□□□ -0.37
PRPF3-203ENST00000467514 C16orf86Q6ZW13 317 aa12.75□□□□□ -0.37
PRPF3-203ENST00000467514 STK11IPQ8N1F8 1099 aa12.75□□□□□ -0.37
PRPF3-203ENST00000467514 SEZ6LQ9BYH1 1024 aa12.75□□□□□ -0.37
PRPF3-203ENST00000467514 FTOQ9C0B1 505 aaKnown RBP eCLIP12.75□□□□□ -0.37
PRPF3-203ENST00000467514 WNT8AQ9H1J5 351 aa12.75□□□□□ -0.37
PRPF3-203ENST00000467514 SMC3Q9UQE7 1217 aa12.75□□□□□ -0.37
PRPF3-203ENST00000467514 MYH4Q9Y623 1939 aa12.75□□□□□ -0.37
PRPF3-203ENST00000467514 DNAJC25-GNG10A0A024R161 153 aa12.74□□□□□ -0.37
PRPF3-203ENST00000467514 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.74□□□□□ -0.37
PRPF3-203ENST00000467514 IFIT3O14879 490 aaKnown RBP12.74□□□□□ -0.37
PRPF3-203ENST00000467514 GPR37L1O60883 481 aa12.74□□□□□ -0.37
PRPF3-203ENST00000467514 PRDM1O75626 825 aa12.74□□□□□ -0.37
PRPF3-203ENST00000467514 RCAN1P53805 252 aa12.74□□□□□ -0.37
PRPF3-203ENST00000467514 PSMC6P62333 389 aa12.74□□□□□ -0.37
PRPF3-203ENST00000467514 STK3Q13188 491 aa12.74□□□□□ -0.37
PRPF3-203ENST00000467514 TTLL4Q14679 1199 aa12.74□□□□□ -0.37
PRPF3-203ENST00000467514 FAM47CQ5HY64 1035 aa12.74□□□□□ -0.37
PRPF3-203ENST00000467514 RRP12Q5JTH9 1297 aaKnown RBP12.74□□□□□ -0.37
PRPF3-203ENST00000467514 APOA5Q6Q788 366 aa12.74□□□□□ -0.37
PRPF3-203ENST00000467514 NSUN7Q8NE18 718 aaKnown RBP12.74□□□□□ -0.37
PRPF3-203ENST00000467514 CHST13Q8NET6 341 aa12.74□□□□□ -0.37
PRPF3-203ENST00000467514 TNPO1Q92973 898 aaKnown RBP12.74□□□□□ -0.37
PRPF3-203ENST00000467514 SLC9A7Q96T83 725 aa12.74□□□□□ -0.37
PRPF3-203ENST00000467514 MKNK2Q9HBH9 465 aa12.74□□□□□ -0.37
PRPF3-203ENST00000467514 COL4A4P53420 1690 aaPredicted RBP12.73□□□□□ -0.37
PRPF3-203ENST00000467514 SCN5AQ14524 2016 aa12.73□□□□□ -0.37
PRPF3-203ENST00000467514 ASB14A6NK59 587 aa12.73□□□□□ -0.37
PRPF3-203ENST00000467514 GOLGA8BA8MQT2 603 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms