RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 TMEM145Q8NBT3 493 aa5.82□□□□□ -1.48
VPS50-209ENST00000467326 SGSM3Q96HU1 749 aa5.82□□□□□ -1.48
VPS50-209ENST00000467326 MTA3Q9BTC8 594 aa5.82□□□□□ -1.48
VPS50-209ENST00000467326 KRTAP9-8Q9BYQ0 159 aa5.82□□□□□ -1.48
VPS50-209ENST00000467326 GCM1Q9NP62 436 aa5.82□□□□□ -1.48
VPS50-209ENST00000467326 MSRB2Q9Y3D2 182 aa5.82□□□□□ -1.48
VPS50-209ENST00000467326 NPIPB6E9PJ23 425 aa5.81□□□□□ -1.48
VPS50-209ENST00000467326 GRIA2P42262 883 aa5.81□□□□□ -1.48
VPS50-209ENST00000467326 LINC00310P59036 64 aa5.81□□□□□ -1.48
VPS50-209ENST00000467326 HSP90AA2PQ14568 343 aaPredicted RBP5.81□□□□□ -1.48
VPS50-209ENST00000467326 CBX2Q14781 532 aaPredicted RBP5.81□□□□□ -1.48
VPS50-209ENST00000467326 KCNA10Q16322 511 aa5.81□□□□□ -1.48
VPS50-209ENST00000467326 WWC2Q6AWC2 1192 aa5.81□□□□□ -1.48
VPS50-209ENST00000467326 CCDC103Q8IW40 242 aa5.81□□□□□ -1.48
VPS50-209ENST00000467326 LRRC47Q8N1G4 583 aaKnown RBP5.81□□□□□ -1.48
VPS50-209ENST00000467326 USP33Q8TEY7 942 aa5.81□□□□□ -1.48
VPS50-209ENST00000467326 DIO2Q92813 273 aa5.81□□□□□ -1.48
VPS50-209ENST00000467326 C1orf159Q96HA4 380 aa5.81□□□□□ -1.48
VPS50-209ENST00000467326 AARSD1Q9BTE6 412 aaKnown RBP5.81□□□□□ -1.48
VPS50-209ENST00000467326 IER2Q9BTL4 223 aa5.81□□□□□ -1.48
VPS50-209ENST00000467326 CNTD2Q9H8S5 307 aa5.81□□□□□ -1.48
VPS50-209ENST00000467326 BTG4Q9NY30 223 aa5.81□□□□□ -1.48
VPS50-209ENST00000467326 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.81□□□□□ -1.48
VPS50-209ENST00000467326 MARCH2Q9P0N8 246 aa5.81□□□□□ -1.48
VPS50-209ENST00000467326 DBR1Q9UK59 544 aaKnown RBP5.81□□□□□ -1.48
VPS50-209ENST00000467326 PDPK1O15530 556 aa5.8□□□□□ -1.48
VPS50-209ENST00000467326 MYO1BO43795 1136 aa5.8□□□□□ -1.48
VPS50-209ENST00000467326 INHBBP09529 407 aa5.8□□□□□ -1.48
VPS50-209ENST00000467326 CDR1P51861 262 aa5.8□□□□□ -1.48
VPS50-209ENST00000467326 EPHB3P54753 998 aa5.8□□□□□ -1.48
VPS50-209ENST00000467326 RPL11P62913 178 aaKnown RBP5.8□□□□□ -1.48
VPS50-209ENST00000467326 ZNF200P98182 395 aaPredicted RBP5.8□□□□□ -1.48
VPS50-209ENST00000467326 MAP4K2Q12851 820 aa5.8□□□□□ -1.48
VPS50-209ENST00000467326 TESK1Q15569 626 aa5.8□□□□□ -1.48
VPS50-209ENST00000467326 INF2Q27J81 1249 aa5.8□□□□□ -1.48
VPS50-209ENST00000467326 IQCEQ6IPM2 695 aa5.8□□□□□ -1.48
VPS50-209ENST00000467326 DBX2Q6ZNG2 339 aa5.8□□□□□ -1.48
VPS50-209ENST00000467326 NETO2Q8NC67 525 aa5.8□□□□□ -1.48
VPS50-209ENST00000467326 KREMEN2Q8NCW0 462 aa5.8□□□□□ -1.48
VPS50-209ENST00000467326 SREK1Q8WXA9 508 aaKnown RBP5.8□□□□□ -1.48
VPS50-209ENST00000467326 KCTD13Q8WZ19 329 aa5.8□□□□□ -1.48
VPS50-209ENST00000467326 ZNF669Q96BR6 464 aaPredicted RBP5.8□□□□□ -1.48
VPS50-209ENST00000467326 ARHGEF4Q9NR80 690 aa5.8□□□□□ -1.48
VPS50-209ENST00000467326 SIRPGQ9P1W8 387 aa5.8□□□□□ -1.48
VPS50-209ENST00000467326 SMG5Q9UPR3 1016 aaKnown RBP5.8□□□□□ -1.48
VPS50-209ENST00000467326 ZC3H12DA2A288 527 aaKnown RBP5.79□□□□□ -1.48
VPS50-209ENST00000467326 F8W031 263 aaPredicted RBP5.79□□□□□ -1.48
VPS50-209ENST00000467326 RFXAPO00287 272 aa5.79□□□□□ -1.48
VPS50-209ENST00000467326 N4BP3O15049 544 aa5.79□□□□□ -1.48
VPS50-209ENST00000467326 FUCA1P04066 466 aa5.79□□□□□ -1.48
VPS50-209ENST00000467326 CAPNS1P04632 268 aa5.79□□□□□ -1.48
VPS50-209ENST00000467326 LTBRP36941 435 aa5.79□□□□□ -1.48
VPS50-209ENST00000467326 SERINC3Q13530 473 aa5.79□□□□□ -1.48
VPS50-209ENST00000467326 RASGRF1Q13972 1273 aa5.79□□□□□ -1.48
VPS50-209ENST00000467326 MTERF2Q49AM1 385 aa5.79□□□□□ -1.48
VPS50-209ENST00000467326 SLC35F1Q5T1Q4 408 aa5.79□□□□□ -1.48
VPS50-209ENST00000467326 TEX2Q8IWB9 1127 aa5.79□□□□□ -1.48
VPS50-209ENST00000467326 MZB1Q8WU39 189 aa5.79□□□□□ -1.48
VPS50-209ENST00000467326 DPF3Q92784 378 aa5.79□□□□□ -1.48
VPS50-209ENST00000467326 RXFP1Q9HBX9 757 aa5.79□□□□□ -1.48
VPS50-209ENST00000467326 TMEFF2Q9UIK5 374 aaPredicted RBP5.79□□□□□ -1.48
VPS50-209ENST00000467326 NUDT5Q9UKK9 219 aa5.79□□□□□ -1.48
VPS50-209ENST00000467326 HCFC2Q9Y5Z7 792 aa5.79□□□□□ -1.48
VPS50-209ENST00000467326 PPP1R11O60927 126 aaPredicted RBP5.78□□□□□ -1.48
VPS50-209ENST00000467326 FPR2P25090 351 aa5.78□□□□□ -1.48
VPS50-209ENST00000467326 GTF2A2P52657 109 aa5.78□□□□□ -1.48
VPS50-209ENST00000467326 PRR5P85299 388 aa5.78□□□□□ -1.48
VPS50-209ENST00000467326 DENND5AQ6IQ26 1287 aa5.78□□□□□ -1.48
VPS50-209ENST00000467326 NLRP10Q86W26 655 aa5.78□□□□□ -1.48
VPS50-209ENST00000467326 DCP2Q8IU60 420 aaKnown RBP5.78□□□□□ -1.48
VPS50-209ENST00000467326 PEX11GQ96HA9 241 aa5.78□□□□□ -1.48
VPS50-209ENST00000467326 SIGLEC10Q96LC7 697 aa5.78□□□□□ -1.48
VPS50-209ENST00000467326 CNOT6Q9ULM6 557 aaKnown RBP5.78□□□□□ -1.48
VPS50-209ENST00000467326 TIMM13Q9Y5L4 95 aaPredicted RBP5.78□□□□□ -1.48
VPS50-209ENST00000467326 IRAK3Q9Y616 596 aa5.78□□□□□ -1.48
VPS50-209ENST00000467326 TRAV20A0A0B4J274 112 aa5.77□□□□□ -1.49
VPS50-209ENST00000467326 C22orf46C9J442 243 aa5.77□□□□□ -1.49
VPS50-209ENST00000467326 NUAK1O60285 661 aa5.77□□□□□ -1.49
VPS50-209ENST00000467326 DLX3O60479 287 aa5.77□□□□□ -1.49
VPS50-209ENST00000467326 NTRK1P04629 796 aa5.77□□□□□ -1.49
VPS50-209ENST00000467326 FGFR1P11362 822 aa5.77□□□□□ -1.49
VPS50-209ENST00000467326 PI3P19957 117 aa5.77□□□□□ -1.49
VPS50-209ENST00000467326 SSRP1Q08945 709 aaKnown RBP5.77□□□□□ -1.49
VPS50-209ENST00000467326 RASA3Q14644 834 aa5.77□□□□□ -1.49
VPS50-209ENST00000467326 SSPNQ14714 243 aa5.77□□□□□ -1.49
VPS50-209ENST00000467326 USP53Q70EK8 1073 aa5.77□□□□□ -1.49
VPS50-209ENST00000467326 SPATC1Q76KD6 591 aa5.77□□□□□ -1.49
VPS50-209ENST00000467326 LDHDQ86WU2 507 aa5.77□□□□□ -1.49
VPS50-209ENST00000467326 IGDCC3Q8IVU1 814 aa5.77□□□□□ -1.49
VPS50-209ENST00000467326 Q8N1Y9 231 aa5.77□□□□□ -1.49
VPS50-209ENST00000467326 RCBTB1Q8NDN9 531 aa5.77□□□□□ -1.49
VPS50-209ENST00000467326 PLEKHO2Q8TD55 490 aa5.77□□□□□ -1.49
VPS50-209ENST00000467326 RELTQ969Z4 430 aa5.77□□□□□ -1.49
VPS50-209ENST00000467326 TSPAN17Q96FV3 270 aa5.77□□□□□ -1.49
VPS50-209ENST00000467326 DEPDC7Q96QD5 511 aa5.77□□□□□ -1.49
VPS50-209ENST00000467326 SPATA9Q9BWV2 254 aa5.77□□□□□ -1.49
VPS50-209ENST00000467326 CCDC113Q9H0I3 377 aa5.77□□□□□ -1.49
VPS50-209ENST00000467326 PFDN2Q9UHV9 154 aa5.77□□□□□ -1.49
VPS50-209ENST00000467326 FBXL7Q9UJT9 491 aa5.77□□□□□ -1.49
VPS50-209ENST00000467326 KCTD3Q9Y597 815 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms