RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 CD99L2Q8TCZ2 262 aa16.85■□□□□ 0.29
DDX56-208ENST00000467318 OXER1Q8TDS5 423 aa16.85■□□□□ 0.29
DDX56-208ENST00000467318 NSUN6Q8TEA1 469 aaKnown RBP16.85■□□□□ 0.29
DDX56-208ENST00000467318 GZF1Q9H116 711 aaPredicted RBP16.85■□□□□ 0.29
DDX56-208ENST00000467318 GJD2Q9UKL4 321 aa16.85■□□□□ 0.29
DDX56-208ENST00000467318 MTMR6Q9Y217 621 aa16.85■□□□□ 0.29
DDX56-208ENST00000467318 RBBP6Q7Z6E9 1792 aaKnown RBP16.84■□□□□ 0.29
DDX56-208ENST00000467318 CCDC194A0A1B0GVG4 234 aa16.84■□□□□ 0.29
DDX56-208ENST00000467318 B4DLN1 442 aa16.84■□□□□ 0.29
DDX56-208ENST00000467318 HOXC6P09630 235 aa16.84■□□□□ 0.29
DDX56-208ENST00000467318 XRCC6P12956 609 aaKnown RBP eCLIP16.84■□□□□ 0.29
DDX56-208ENST00000467318 RGS2P41220 211 aa16.84■□□□□ 0.29
DDX56-208ENST00000467318 NR5A1Q13285 461 aa16.84■□□□□ 0.29
DDX56-208ENST00000467318 USP6NLQ92738 828 aa16.84■□□□□ 0.29
DDX56-208ENST00000467318 RMDN3Q96TC7 470 aa16.84■□□□□ 0.29
DDX56-208ENST00000467318 MPHOSPH6Q99547 160 aaKnown RBP16.84■□□□□ 0.29
DDX56-208ENST00000467318 COL20A1Q9P218 1284 aa16.84■□□□□ 0.29
DDX56-208ENST00000467318 MGAMO43451 1857 aa16.83■□□□□ 0.29
DDX56-208ENST00000467318 PLXNB2O15031 1838 aa16.83■□□□□ 0.28
DDX56-208ENST00000467318 COBLO75128 1261 aa16.83■□□□□ 0.28
DDX56-208ENST00000467318 PGK2P07205 417 aa16.83■□□□□ 0.28
DDX56-208ENST00000467318 CNTN2Q02246 1040 aa16.83■□□□□ 0.28
DDX56-208ENST00000467318 ZNF792Q3KQV3 632 aa16.83■□□□□ 0.28
DDX56-208ENST00000467318 ZNF467Q7Z7K2 595 aaPredicted RBP16.83■□□□□ 0.28
DDX56-208ENST00000467318 NOSTRINQ8IVI9 506 aa16.83■□□□□ 0.28
DDX56-208ENST00000467318 RASGRP4Q8TDF6 673 aa16.83■□□□□ 0.28
DDX56-208ENST00000467318 TNFRSF25Q93038 417 aa16.83■□□□□ 0.28
DDX56-208ENST00000467318 TAAR1Q96RJ0 339 aa16.83■□□□□ 0.28
DDX56-208ENST00000467318 IWS1Q96ST2 819 aa16.83■□□□□ 0.28
DDX56-208ENST00000467318 ANO3Q9BYT9 981 aa16.83■□□□□ 0.28
DDX56-208ENST00000467318 ZSCAN16Q9H4T2 348 aaPredicted RBP16.83■□□□□ 0.28
DDX56-208ENST00000467318 TMEM260Q9NX78 707 aa16.83■□□□□ 0.28
DDX56-208ENST00000467318 ZNFX1Q9P2E3 1918 aaKnown RBP16.83■□□□□ 0.28
DDX56-208ENST00000467318 DOCK3Q8IZD9 2030 aa16.83■□□□□ 0.28
DDX56-208ENST00000467318 ZNF236Q9UL36 1845 aa16.83■□□□□ 0.28
DDX56-208ENST00000467318 ADAMTS3O15072 1205 aa16.82■□□□□ 0.28
DDX56-208ENST00000467318 FOXN1O15353 648 aa16.82■□□□□ 0.28
DDX56-208ENST00000467318 HSPA1AP0DMV8 641 aaKnown RBP16.82■□□□□ 0.28
DDX56-208ENST00000467318 HSPA1BP0DMV9 641 aaKnown RBP16.82■□□□□ 0.28
DDX56-208ENST00000467318 XRCC5P13010 732 aaKnown RBP16.82■□□□□ 0.28
DDX56-208ENST00000467318 CTCFP49711 727 aaPredicted RBP16.82■□□□□ 0.28
DDX56-208ENST00000467318 PRMT2P55345 433 aa16.82■□□□□ 0.28
DDX56-208ENST00000467318 NONOQ15233 471 aaKnown RBP eCLIP16.82■□□□□ 0.28
DDX56-208ENST00000467318 KLHL40Q2TBA0 621 aa16.82■□□□□ 0.28
DDX56-208ENST00000467318 ARHGEF16Q5VV41 709 aa16.82■□□□□ 0.28
DDX56-208ENST00000467318 BRAPQ7Z569 592 aa16.82■□□□□ 0.28
DDX56-208ENST00000467318 PXMP2Q9NR77 195 aa16.82■□□□□ 0.28
DDX56-208ENST00000467318 FRMPD4Q14CM0 1322 aa16.82■□□□□ 0.28
DDX56-208ENST00000467318 ZSCAN22P10073 491 aaPredicted RBP16.81■□□□□ 0.28
DDX56-208ENST00000467318 SREBF1P36956 1147 aa16.81■□□□□ 0.28
DDX56-208ENST00000467318 PIK3AP1Q6ZUJ8 805 aa16.81■□□□□ 0.28
DDX56-208ENST00000467318 MSL3Q8N5Y2 521 aaKnown RBP16.81■□□□□ 0.28
DDX56-208ENST00000467318 APBA2Q99767 749 aa16.81■□□□□ 0.28
DDX56-208ENST00000467318 SRRDQ9UH36 339 aa16.81■□□□□ 0.28
DDX56-208ENST00000467318 RPTORQ8N122 1335 aa16.81■□□□□ 0.28
DDX56-208ENST00000467318 SOWAHBA6NEL2 793 aa16.81■□□□□ 0.28
DDX56-208ENST00000467318 ASB14A6NK59 587 aa16.81■□□□□ 0.28
DDX56-208ENST00000467318 BRD1O95696 1058 aa16.81■□□□□ 0.28
DDX56-208ENST00000467318 FLT3LGP49771 235 aa16.81■□□□□ 0.28
DDX56-208ENST00000467318 ALDH5A1P51649 535 aaPredicted RBP16.81■□□□□ 0.28
DDX56-208ENST00000467318 USP11P51784 963 aa16.81■□□□□ 0.28
DDX56-208ENST00000467318 XRRA1Q6P2D8 792 aa16.81■□□□□ 0.28
DDX56-208ENST00000467318 TBCKQ8TEA7 893 aa16.81■□□□□ 0.28
DDX56-208ENST00000467318 PURBQ96QR8 312 aaKnown RBP16.81■□□□□ 0.28
DDX56-208ENST00000467318 PDCD2LQ9BRP1 358 aa16.81■□□□□ 0.28
DDX56-208ENST00000467318 GRPEL1Q9HAV7 217 aa16.81■□□□□ 0.28
DDX56-208ENST00000467318 KIF28PB7ZC32 967 aa16.8■□□□□ 0.28
DDX56-208ENST00000467318 HSPA8P11142 646 aaKnown RBP16.8■□□□□ 0.28
DDX56-208ENST00000467318 CYP2B6P20813 491 aa16.8■□□□□ 0.28
DDX56-208ENST00000467318 PRKCZQ05513 592 aa16.8■□□□□ 0.28
DDX56-208ENST00000467318 IRF5Q13568 498 aa16.8■□□□□ 0.28
DDX56-208ENST00000467318 PKP1Q13835 747 aa16.8■□□□□ 0.28
DDX56-208ENST00000467318 MAMDC4Q6UXC1 1216 aa16.8■□□□□ 0.28
DDX56-208ENST00000467318 MAML3Q96JK9 1138 aa16.8■□□□□ 0.28
DDX56-208ENST00000467318 PGBD1Q96JS3 809 aa16.8■□□□□ 0.28
DDX56-208ENST00000467318 STAM2O75886 525 aa16.79■□□□□ 0.28
DDX56-208ENST00000467318 NR3C2P08235 984 aa16.79■□□□□ 0.28
DDX56-208ENST00000467318 CYP3A4P08684 503 aa16.79■□□□□ 0.28
DDX56-208ENST00000467318 EIF2AK2P19525 551 aaKnown RBP16.79■□□□□ 0.28
DDX56-208ENST00000467318 EDNRBP24530 442 aa16.79■□□□□ 0.28
DDX56-208ENST00000467318 TRAPPC10P48553 1259 aa16.79■□□□□ 0.28
DDX56-208ENST00000467318 ARHGAP4P98171 946 aa16.79■□□□□ 0.28
DDX56-208ENST00000467318 PGM5Q15124 567 aa16.79■□□□□ 0.28
DDX56-208ENST00000467318 PCNX4Q63HM2 1172 aa16.79■□□□□ 0.28
DDX56-208ENST00000467318 FERMT3Q86UX7 667 aa16.79■□□□□ 0.28
DDX56-208ENST00000467318 TRMT44Q8IYL2 757 aaKnown RBP16.79■□□□□ 0.28
DDX56-208ENST00000467318 NPLOC4Q8TAT6 608 aa16.79■□□□□ 0.28
DDX56-208ENST00000467318 CRYGNQ8WXF5 182 aa16.79■□□□□ 0.28
DDX56-208ENST00000467318 FGD4Q96M96 766 aa16.79■□□□□ 0.28
DDX56-208ENST00000467318 GABRQQ9UN88 632 aa16.79■□□□□ 0.28
DDX56-208ENST00000467318 ASTN1O14525 1302 aa16.79■□□□□ 0.28
DDX56-208ENST00000467318 F13A1P00488 732 aa16.78■□□□□ 0.28
DDX56-208ENST00000467318 CCND2P30279 289 aa16.78■□□□□ 0.28
DDX56-208ENST00000467318 STXBP2Q15833 593 aa16.78■□□□□ 0.28
DDX56-208ENST00000467318 INF2Q27J81 1249 aa16.78■□□□□ 0.28
DDX56-208ENST00000467318 RILPL1Q5EBL4 403 aa16.78■□□□□ 0.28
DDX56-208ENST00000467318 EARS2Q5JPH6 523 aaKnown RBP16.78■□□□□ 0.28
DDX56-208ENST00000467318 OLFML2BQ68BL8 750 aa16.78■□□□□ 0.28
DDX56-208ENST00000467318 NEK8Q86SG6 692 aa16.78■□□□□ 0.28
DDX56-208ENST00000467318 VSIG10LQ86VR7 867 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms