RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 GCOM1H8Y6P7 765 aaPredicted RBP14.89□□□□□ -0.03
COL5A1-206ENST00000465877 POLR2MP0CAP2 368 aa14.89□□□□□ -0.03
COL5A1-206ENST00000465877 SMPD1P17405 629 aa14.89□□□□□ -0.03
COL5A1-206ENST00000465877 PTGS1P23219 599 aa14.89□□□□□ -0.03
COL5A1-206ENST00000465877 CST5P28325 142 aaPredicted RBP14.89□□□□□ -0.03
COL5A1-206ENST00000465877 MRPL12P52815 198 aaKnown RBP14.89□□□□□ -0.03
COL5A1-206ENST00000465877 GJA9P57773 515 aa14.89□□□□□ -0.03
COL5A1-206ENST00000465877 FUT2Q10981 343 aa14.89□□□□□ -0.03
COL5A1-206ENST00000465877 TOB2Q14106 344 aaPredicted RBP14.89□□□□□ -0.03
COL5A1-206ENST00000465877 LRRC26Q2I0M4 334 aa14.89□□□□□ -0.03
COL5A1-206ENST00000465877 C8orf34Q49A92 452 aa14.89□□□□□ -0.03
COL5A1-206ENST00000465877 ARHGEF16Q5VV41 709 aa14.89□□□□□ -0.03
COL5A1-206ENST00000465877 HEATR3Q7Z4Q2 680 aa14.89□□□□□ -0.03
COL5A1-206ENST00000465877 SAMD3Q8N6K7 520 aa14.89□□□□□ -0.03
COL5A1-206ENST00000465877 GPKOWQ92917 476 aaPredicted RBP eCLIP14.89□□□□□ -0.03
COL5A1-206ENST00000465877 SPC25Q9HBM1 224 aa14.89□□□□□ -0.03
COL5A1-206ENST00000465877 FAM217BQ9NTX9 383 aaPredicted RBP14.89□□□□□ -0.03
COL5A1-206ENST00000465877 PHF24Q9UPV7 400 aa14.89□□□□□ -0.03
COL5A1-206ENST00000465877 GNEQ9Y223 722 aaKnown RBP14.89□□□□□ -0.03
COL5A1-206ENST00000465877 SCN10AQ9Y5Y9 1956 aa14.88□□□□□ -0.03
COL5A1-206ENST00000465877 A0A1W2PQ45 241 aaPredicted RBP14.88□□□□□ -0.03
COL5A1-206ENST00000465877 A0A1W2PQY0 241 aa14.88□□□□□ -0.03
COL5A1-206ENST00000465877 EVI5O60447 810 aa14.88□□□□□ -0.03
COL5A1-206ENST00000465877 IRX5P78411 483 aaPredicted RBP14.88□□□□□ -0.03
COL5A1-206ENST00000465877 PPP2R5BQ15173 497 aa14.88□□□□□ -0.03
COL5A1-206ENST00000465877 TMEM63BQ5T3F8 832 aa14.88□□□□□ -0.03
COL5A1-206ENST00000465877 WWC2Q6AWC2 1192 aa14.88□□□□□ -0.03
COL5A1-206ENST00000465877 NOL8Q76FK4 1167 aaKnown RBP14.88□□□□□ -0.03
COL5A1-206ENST00000465877 C7orf61Q8IZ16 206 aa14.88□□□□□ -0.03
COL5A1-206ENST00000465877 KLHDC9Q8NEP7 349 aa14.88□□□□□ -0.03
COL5A1-206ENST00000465877 SCFD2Q8WU76 684 aa14.88□□□□□ -0.03
COL5A1-206ENST00000465877 IWS1Q96ST2 819 aa14.88□□□□□ -0.03
COL5A1-206ENST00000465877 PDCD2LQ9BRP1 358 aa14.88□□□□□ -0.03
COL5A1-206ENST00000465877 CCDC196A0A1B0GTZ2 297 aa14.87□□□□□ -0.03
COL5A1-206ENST00000465877 RBM47A0AV96 593 aaKnown RBP14.87□□□□□ -0.03
COL5A1-206ENST00000465877 MOXD2PA6NHM9 499 aa14.87□□□□□ -0.03
COL5A1-206ENST00000465877 CTAGE5O15320 804 aa14.87□□□□□ -0.03
COL5A1-206ENST00000465877 SEC24BO95487 1268 aa14.87□□□□□ -0.03
COL5A1-206ENST00000465877 ATN1P54259 1190 aaPredicted RBP14.87□□□□□ -0.03
COL5A1-206ENST00000465877 EVCP57679 992 aa14.87□□□□□ -0.03
COL5A1-206ENST00000465877 PGM5Q15124 567 aa14.87□□□□□ -0.03
COL5A1-206ENST00000465877 DUSP28Q4G0W2 176 aa14.87□□□□□ -0.03
COL5A1-206ENST00000465877 IQSEC1Q6DN90 963 aa14.87□□□□□ -0.03
COL5A1-206ENST00000465877 PPP1R18Q6NYC8 613 aa14.87□□□□□ -0.03
COL5A1-206ENST00000465877 IL31RAQ8NI17 732 aa14.87□□□□□ -0.03
COL5A1-206ENST00000465877 FERMT2Q96AC1 680 aa14.87□□□□□ -0.03
COL5A1-206ENST00000465877 TSEN34Q9BSV6 310 aaKnown RBP14.87□□□□□ -0.03
COL5A1-206ENST00000465877 WDR11Q9BZH6 1224 aa14.87□□□□□ -0.03
COL5A1-206ENST00000465877 TANC1Q9C0D5 1861 aa14.86□□□□□ -0.03
COL5A1-206ENST00000465877 LAMA3Q16787 3333 aa14.86□□□□□ -0.03
COL5A1-206ENST00000465877 H0YGN5 161 aa14.86□□□□□ -0.03
COL5A1-206ENST00000465877 hCG_1984214I3L0E3 225 aa14.86□□□□□ -0.03
COL5A1-206ENST00000465877 PIK3CDO00329 1044 aa14.86□□□□□ -0.03
COL5A1-206ENST00000465877 ARIH2O95376 493 aa14.86□□□□□ -0.03
COL5A1-206ENST00000465877 NR3C2P08235 984 aa14.86□□□□□ -0.03
COL5A1-206ENST00000465877 ADD1P35611 737 aaKnown RBP14.86□□□□□ -0.03
COL5A1-206ENST00000465877 ACLYP53396 1101 aa14.86□□□□□ -0.03
COL5A1-206ENST00000465877 RTP1P59025 263 aa14.86□□□□□ -0.03
COL5A1-206ENST00000465877 NKX3-2P78367 333 aa14.86□□□□□ -0.03
COL5A1-206ENST00000465877 BEX3Q00994 111 aa14.86□□□□□ -0.03
COL5A1-206ENST00000465877 SNX17Q15036 470 aa14.86□□□□□ -0.03
COL5A1-206ENST00000465877 STXBP2Q15833 593 aa14.86□□□□□ -0.03
COL5A1-206ENST00000465877 CCSAPQ6IQ19 270 aaPredicted RBP14.86□□□□□ -0.03
COL5A1-206ENST00000465877 FCHSD1Q86WN1 690 aa14.86□□□□□ -0.03
COL5A1-206ENST00000465877 ZNF713Q8N859 430 aaPredicted RBP14.86□□□□□ -0.03
COL5A1-206ENST00000465877 PCSK9Q8NBP7 692 aaKnown RBP14.86□□□□□ -0.03
COL5A1-206ENST00000465877 SMARCC2Q8TAQ2 1214 aa14.86□□□□□ -0.03
COL5A1-206ENST00000465877 CUL5Q93034 780 aa14.86□□□□□ -0.03
COL5A1-206ENST00000465877 IL17RAQ96F46 866 aa14.86□□□□□ -0.03
COL5A1-206ENST00000465877 PDRG1Q9NUG6 133 aa14.86□□□□□ -0.03
COL5A1-206ENST00000465877 NR2E3Q9Y5X4 410 aa14.86□□□□□ -0.03
COL5A1-206ENST00000465877 MEIS2O14770 477 aa14.85□□□□□ -0.03
COL5A1-206ENST00000465877 ASGR1P07306 291 aa14.85□□□□□ -0.03
COL5A1-206ENST00000465877 PDIA3P30101 505 aaKnown RBP14.85□□□□□ -0.03
COL5A1-206ENST00000465877 CCND2P30279 289 aa14.85□□□□□ -0.03
COL5A1-206ENST00000465877 NAPAP54920 295 aa14.85□□□□□ -0.03
COL5A1-206ENST00000465877 TTLL4Q14679 1199 aa14.85□□□□□ -0.03
COL5A1-206ENST00000465877 KCNA10Q16322 511 aa14.85□□□□□ -0.03
COL5A1-206ENST00000465877 FSCN1Q16658 493 aaKnown RBP14.85□□□□□ -0.03
COL5A1-206ENST00000465877 TYW1BQ6NUM6 668 aa14.85□□□□□ -0.03
COL5A1-206ENST00000465877 USP17L6PQ6QN14 398 aa14.85□□□□□ -0.03
COL5A1-206ENST00000465877 SEPT14Q6ZU15 432 aa14.85□□□□□ -0.03
COL5A1-206ENST00000465877 OR6J1Q8NGC5 347 aa14.85□□□□□ -0.03
COL5A1-206ENST00000465877 AP5M1Q9H0R1 490 aa14.85□□□□□ -0.03
COL5A1-206ENST00000465877 NCOA5Q9HCD5 579 aaKnown RBP14.85□□□□□ -0.03
COL5A1-206ENST00000465877 Q9Y3F1 56 aa14.85□□□□□ -0.03
COL5A1-206ENST00000465877 STXBP3O00186 592 aa14.84□□□□□ -0.03
COL5A1-206ENST00000465877 NKRFO15226 690 aaKnown RBP eCLIP14.84□□□□□ -0.03
COL5A1-206ENST00000465877 DYNC1LI2O43237 492 aaPredicted RBP14.84□□□□□ -0.03
COL5A1-206ENST00000465877 MYCLP12524 364 aaPredicted RBP14.84□□□□□ -0.03
COL5A1-206ENST00000465877 CCT2P78371 535 aaKnown RBP14.84□□□□□ -0.03
COL5A1-206ENST00000465877 NTRK3Q16288 839 aa14.84□□□□□ -0.03
COL5A1-206ENST00000465877 UBE2SQ16763 222 aa14.84□□□□□ -0.03
COL5A1-206ENST00000465877 PFKFB3Q16875 520 aaPredicted RBP14.84□□□□□ -0.03
COL5A1-206ENST00000465877 TRIM60Q495X7 471 aa14.84□□□□□ -0.03
COL5A1-206ENST00000465877 GNASQ5JWF2 1037 aa14.84□□□□□ -0.03
COL5A1-206ENST00000465877 SLC39A5Q6ZMH5 540 aa14.84□□□□□ -0.03
COL5A1-206ENST00000465877 PHKBQ93100 1093 aa14.84□□□□□ -0.03
COL5A1-206ENST00000465877 PSTPIP2Q9H939 334 aa14.84□□□□□ -0.03
COL5A1-206ENST00000465877 STARD7Q9NQZ5 370 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms