RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 POU5F2Q8N7G0 328 aa6.23□□□□□ -1.41
EXOSC3-204ENST00000465860 LRRN4CLQ8ND94 238 aa6.23□□□□□ -1.41
EXOSC3-204ENST00000465860 PI4K2BQ8TCG2 481 aa6.23□□□□□ -1.41
EXOSC3-204ENST00000465860 GAL3ST3Q96A11 431 aa6.23□□□□□ -1.41
EXOSC3-204ENST00000465860 BABAM1Q9NWV8 329 aa6.23□□□□□ -1.41
EXOSC3-204ENST00000465860 CHPF2Q9P2E5 772 aa6.23□□□□□ -1.41
EXOSC3-204ENST00000465860 GTF2IRD1Q9UHL9 959 aa6.23□□□□□ -1.41
EXOSC3-204ENST00000465860 SNX11Q9Y5W9 270 aa6.23□□□□□ -1.41
EXOSC3-204ENST00000465860 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.23□□□□□ -1.41
EXOSC3-204ENST00000465860 FER1L6Q2WGJ9 1857 aa6.23□□□□□ -1.41
EXOSC3-204ENST00000465860 DDX60Q8IY21 1712 aaKnown RBP6.22□□□□□ -1.41
EXOSC3-204ENST00000465860 ABCC12Q96J65 1359 aa6.22□□□□□ -1.41
EXOSC3-204ENST00000465860 BIN1O00499 593 aa6.22□□□□□ -1.41
EXOSC3-204ENST00000465860 GPTP24298 496 aa6.22□□□□□ -1.41
EXOSC3-204ENST00000465860 PRELPP51888 382 aa6.22□□□□□ -1.41
EXOSC3-204ENST00000465860 NKPD1Q17RQ9 610 aa6.22□□□□□ -1.41
EXOSC3-204ENST00000465860 ANGEL2Q5VTE6 544 aaKnown RBP6.22□□□□□ -1.41
EXOSC3-204ENST00000465860 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.22□□□□□ -1.41
EXOSC3-204ENST00000465860 SV2BQ7L1I2 683 aa6.22□□□□□ -1.41
EXOSC3-204ENST00000465860 ATG4DQ86TL0 474 aaPredicted RBP6.22□□□□□ -1.41
EXOSC3-204ENST00000465860 SYNE4Q8N205 404 aa6.22□□□□□ -1.41
EXOSC3-204ENST00000465860 XAGE3Q8WTP9 111 aa6.22□□□□□ -1.41
EXOSC3-204ENST00000465860 PLPPR2Q96GM1 343 aa6.22□□□□□ -1.41
EXOSC3-204ENST00000465860 PHAXQ9H814 394 aaKnown RBP6.22□□□□□ -1.41
EXOSC3-204ENST00000465860 FBRSQ9HAH7 460 aa6.22□□□□□ -1.41
EXOSC3-204ENST00000465860 IFT57Q9NWB7 429 aa6.22□□□□□ -1.41
EXOSC3-204ENST00000465860 TTF2Q9UNY4 1162 aaKnown RBP6.22□□□□□ -1.41
EXOSC3-204ENST00000465860 MAP3K15Q6ZN16 1313 aa6.22□□□□□ -1.41
EXOSC3-204ENST00000465860 PRAMEF27A3QJZ7 478 aa6.21□□□□□ -1.42
EXOSC3-204ENST00000465860 TCERG1O14776 1098 aaKnown RBP6.21□□□□□ -1.42
EXOSC3-204ENST00000465860 LRIG2O94898 1065 aa6.21□□□□□ -1.42
EXOSC3-204ENST00000465860 CDK8P49336 464 aa6.21□□□□□ -1.42
EXOSC3-204ENST00000465860 GNAI1P63096 354 aa6.21□□□□□ -1.42
EXOSC3-204ENST00000465860 AIMP1Q12904 312 aaKnown RBP6.21□□□□□ -1.42
EXOSC3-204ENST00000465860 CCDC27Q2M243 656 aa6.21□□□□□ -1.42
EXOSC3-204ENST00000465860 CLEC4GQ6UXB4 293 aa6.21□□□□□ -1.42
EXOSC3-204ENST00000465860 CYFIP1Q7L576 1253 aa6.21□□□□□ -1.42
EXOSC3-204ENST00000465860 COPS6Q7L5N1 327 aa6.21□□□□□ -1.42
EXOSC3-204ENST00000465860 ZNF34Q8IZ26 560 aa6.21□□□□□ -1.42
EXOSC3-204ENST00000465860 KCT2Q8NC54 265 aa6.21□□□□□ -1.42
EXOSC3-204ENST00000465860 ZNF507Q8TCN5 953 aa6.21□□□□□ -1.42
EXOSC3-204ENST00000465860 FRMD6Q96NE9 622 aa6.21□□□□□ -1.42
EXOSC3-204ENST00000465860 TRAIPQ9BWF2 469 aa6.21□□□□□ -1.42
EXOSC3-204ENST00000465860 PRDM7Q9NQW5 492 aa6.21□□□□□ -1.42
EXOSC3-204ENST00000465860 RNF19AQ9NV58 838 aa6.21□□□□□ -1.42
EXOSC3-204ENST00000465860 NIP7Q9Y221 180 aaKnown RBP eCLIP6.21□□□□□ -1.42
EXOSC3-204ENST00000465860 ATP10DQ9P241 1426 aa6.21□□□□□ -1.42
EXOSC3-204ENST00000465860 ADCY9O60503 1353 aa6.2□□□□□ -1.42
EXOSC3-204ENST00000465860 TIAM2Q8IVF5 1701 aa6.2□□□□□ -1.42
EXOSC3-204ENST00000465860 ERVV-1B6SEH8 477 aa6.2□□□□□ -1.42
EXOSC3-204ENST00000465860 SLITRK5O94991 958 aa6.2□□□□□ -1.42
EXOSC3-204ENST00000465860 C8AP07357 584 aa6.2□□□□□ -1.42
EXOSC3-204ENST00000465860 EIF4BP23588 611 aaKnown RBP6.2□□□□□ -1.42
EXOSC3-204ENST00000465860 GNA15P30679 374 aa6.2□□□□□ -1.42
EXOSC3-204ENST00000465860 SLBPQ14493 270 aaKnown RBP eCLIP6.2□□□□□ -1.42
EXOSC3-204ENST00000465860 SUSD4Q5VX71 490 aa6.2□□□□□ -1.42
EXOSC3-204ENST00000465860 TTBK2Q6IQ55 1244 aa6.2□□□□□ -1.42
EXOSC3-204ENST00000465860 SLC23A3Q6PIS1 610 aa6.2□□□□□ -1.42
EXOSC3-204ENST00000465860 OLFM4Q6UX06 510 aa6.2□□□□□ -1.42
EXOSC3-204ENST00000465860 HDXQ7Z353 690 aa6.2□□□□□ -1.42
EXOSC3-204ENST00000465860 NBPF5PQ86XG9 351 aaPredicted RBP6.2□□□□□ -1.42
EXOSC3-204ENST00000465860 C2CD5Q86YS7 1000 aa6.2□□□□□ -1.42
EXOSC3-204ENST00000465860 CNBD1Q8NA66 436 aa6.2□□□□□ -1.42
EXOSC3-204ENST00000465860 ASB11Q8WXH4 323 aa6.2□□□□□ -1.42
EXOSC3-204ENST00000465860 DDX21Q9NR30 783 aaKnown RBP eCLIP6.2□□□□□ -1.42
EXOSC3-204ENST00000465860 DICER1Q9UPY3 1922 aaKnown RBP6.2□□□□□ -1.42
EXOSC3-204ENST00000465860 ZNF521Q96K83 1311 aa6.2□□□□□ -1.42
EXOSC3-204ENST00000465860 FANCIQ9NVI1 1328 aa6.2□□□□□ -1.42
EXOSC3-204ENST00000465860 CACNA1FO60840 1977 aa6.19□□□□□ -1.42
EXOSC3-204ENST00000465860 KLRG2A4D1S0 409 aaPredicted RBP6.19□□□□□ -1.42
EXOSC3-204ENST00000465860 GRIN3BO60391 1043 aa6.19□□□□□ -1.42
EXOSC3-204ENST00000465860 NTSR2O95665 410 aa6.19□□□□□ -1.42
EXOSC3-204ENST00000465860 HOXB7P09629 217 aa6.19□□□□□ -1.42
EXOSC3-204ENST00000465860 SRGNP10124 158 aa6.19□□□□□ -1.42
EXOSC3-204ENST00000465860 NKG7Q16617 165 aa6.19□□□□□ -1.42
EXOSC3-204ENST00000465860 DALRD3Q5D0E6 543 aaKnown RBP6.19□□□□□ -1.42
EXOSC3-204ENST00000465860 WIPI1Q5MNZ9 446 aaPredicted RBP6.19□□□□□ -1.42
EXOSC3-204ENST00000465860 KIF6Q6ZMV9 814 aa6.19□□□□□ -1.42
EXOSC3-204ENST00000465860 G2E3Q7L622 706 aa6.19□□□□□ -1.42
EXOSC3-204ENST00000465860 FAM168AQ92567 244 aa6.19□□□□□ -1.42
EXOSC3-204ENST00000465860 BRIP1Q9BX63 1249 aa6.19□□□□□ -1.42
EXOSC3-204ENST00000465860 WNT10AQ9GZT5 417 aa6.19□□□□□ -1.42
EXOSC3-204ENST00000465860 PRDM5Q9NQX1 630 aaPredicted RBP6.19□□□□□ -1.42
EXOSC3-204ENST00000465860 KRTAP4-8A0A0G2JLE6 195 aa6.18□□□□□ -1.42
EXOSC3-204ENST00000465860 PRR33A8MZF0 331 aa6.18□□□□□ -1.42
EXOSC3-204ENST00000465860 H0YIN7 160 aa6.18□□□□□ -1.42
EXOSC3-204ENST00000465860 PRPF40AO75400 957 aaKnown RBP6.18□□□□□ -1.42
EXOSC3-204ENST00000465860 EXOSC9Q06265 439 aaKnown RBP6.18□□□□□ -1.42
EXOSC3-204ENST00000465860 IKZF1Q13422 519 aa6.18□□□□□ -1.42
EXOSC3-204ENST00000465860 FZD5Q13467 585 aa6.18□□□□□ -1.42
EXOSC3-204ENST00000465860 NPM2Q86SE8 214 aaKnown RBP6.18□□□□□ -1.42
EXOSC3-204ENST00000465860 NLRP10Q86W26 655 aa6.18□□□□□ -1.42
EXOSC3-204ENST00000465860 ZNF622Q969S3 477 aaKnown RBP eCLIP6.18□□□□□ -1.42
EXOSC3-204ENST00000465860 FOXQ1Q9C009 403 aa6.18□□□□□ -1.42
EXOSC3-204ENST00000465860 MAPK8IP1Q9UQF2 711 aa6.18□□□□□ -1.42
EXOSC3-204ENST00000465860 ZNF652Q9Y2D9 606 aa6.18□□□□□ -1.42
EXOSC3-204ENST00000465860 PCDHB5Q9Y5E4 795 aa6.18□□□□□ -1.42
EXOSC3-204ENST00000465860 SNCAIPQ9Y6H5 919 aa6.18□□□□□ -1.42
EXOSC3-204ENST00000465860 IL16Q14005 1332 aa6.18□□□□□ -1.42
EXOSC3-204ENST00000465860 PITPNM2Q9BZ72 1349 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms