RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 SUPT20HL2P0C7V6 817 aa12.87□□□□□ -0.35
COL11A1-207ENST00000465209 RFC2P35250 354 aa12.87□□□□□ -0.35
COL11A1-207ENST00000465209 HAND2P61296 217 aa12.87□□□□□ -0.35
COL11A1-207ENST00000465209 MRPS5P82675 430 aaKnown RBP12.87□□□□□ -0.35
COL11A1-207ENST00000465209 NMIQ13287 307 aaPredicted RBP12.87□□□□□ -0.35
COL11A1-207ENST00000465209 GPNMBQ14956 572 aa12.87□□□□□ -0.35
COL11A1-207ENST00000465209 PPP2R5BQ15173 497 aa12.87□□□□□ -0.35
COL11A1-207ENST00000465209 CCDC62Q6P9F0 684 aa12.87□□□□□ -0.35
COL11A1-207ENST00000465209 SCFD2Q8WU76 684 aa12.87□□□□□ -0.35
COL11A1-207ENST00000465209 TTC14Q96N46 770 aa12.87□□□□□ -0.35
COL11A1-207ENST00000465209 CCDC171Q6TFL3 1326 aa12.87□□□□□ -0.35
COL11A1-207ENST00000465209 ZBBXA8MT70 800 aa12.86□□□□□ -0.35
COL11A1-207ENST00000465209 PCP11498 1178 aaKnown RBP12.86□□□□□ -0.35
COL11A1-207ENST00000465209 RRP1P56182 461 aaKnown RBP12.86□□□□□ -0.35
COL11A1-207ENST00000465209 PTPN11Q06124 597 aaPredicted RBP12.86□□□□□ -0.35
COL11A1-207ENST00000465209 HDAC1Q13547 482 aaPredicted RBP12.86□□□□□ -0.35
COL11A1-207ENST00000465209 ANKRD45Q5TZF3 282 aa12.86□□□□□ -0.35
COL11A1-207ENST00000465209 DEFB128Q7Z7B8 93 aa12.86□□□□□ -0.35
COL11A1-207ENST00000465209 RGS22Q8NE09 1264 aa12.86□□□□□ -0.35
COL11A1-207ENST00000465209 SLC9A7Q96T83 725 aa12.86□□□□□ -0.35
COL11A1-207ENST00000465209 UHRF1Q96T88 793 aaPredicted RBP12.86□□□□□ -0.35
COL11A1-207ENST00000465209 CPVLQ9H3G5 476 aa12.86□□□□□ -0.35
COL11A1-207ENST00000465209 COL20A1Q9P218 1284 aa12.86□□□□□ -0.35
COL11A1-207ENST00000465209 PNMA2Q9UL42 364 aa12.86□□□□□ -0.35
COL11A1-207ENST00000465209 MTCH2Q9Y6C9 303 aa12.86□□□□□ -0.35
COL11A1-207ENST00000465209 MYH7BA7E2Y1 1941 aa12.86□□□□□ -0.35
COL11A1-207ENST00000465209 SIP14410 1827 aa12.85□□□□□ -0.35
COL11A1-207ENST00000465209 RFXAPO00287 272 aa12.85□□□□□ -0.35
COL11A1-207ENST00000465209 BMP1P13497 986 aa12.85□□□□□ -0.35
COL11A1-207ENST00000465209 COL9A1P20849 921 aa12.85□□□□□ -0.35
COL11A1-207ENST00000465209 TFF2Q03403 129 aa12.85□□□□□ -0.35
COL11A1-207ENST00000465209 TAP1Q03518 808 aa12.85□□□□□ -0.35
COL11A1-207ENST00000465209 ARHGAP1Q07960 439 aa12.85□□□□□ -0.35
COL11A1-207ENST00000465209 PDE4DQ08499 809 aa12.85□□□□□ -0.35
COL11A1-207ENST00000465209 TMEM67Q5HYA8 995 aa12.85□□□□□ -0.35
COL11A1-207ENST00000465209 SPRED2Q7Z698 418 aa12.85□□□□□ -0.35
COL11A1-207ENST00000465209 SESTD1Q86VW0 696 aa12.85□□□□□ -0.35
COL11A1-207ENST00000465209 PHOSPHO2Q8TCD6 241 aa12.85□□□□□ -0.35
COL11A1-207ENST00000465209 TBC1D5Q92609 795 aa12.85□□□□□ -0.35
COL11A1-207ENST00000465209 DHX38Q92620 1227 aaKnown RBP12.85□□□□□ -0.35
COL11A1-207ENST00000465209 KAT2BQ92831 832 aa12.85□□□□□ -0.35
COL11A1-207ENST00000465209 TOMM22Q9NS69 142 aa12.85□□□□□ -0.35
COL11A1-207ENST00000465209 RAPGEFL1Q9UHV5 662 aa12.85□□□□□ -0.35
COL11A1-207ENST00000465209 RAD50Q92878 1312 aa12.85□□□□□ -0.35
COL11A1-207ENST00000465209 RBAK-RBAKDNI3L0D1 243 aa12.84□□□□□ -0.35
COL11A1-207ENST00000465209 KPNA6O60684 536 aa12.84□□□□□ -0.35
COL11A1-207ENST00000465209 LPXNO60711 386 aa12.84□□□□□ -0.35
COL11A1-207ENST00000465209 MMP3P08254 477 aa12.84□□□□□ -0.35
COL11A1-207ENST00000465209 GOLGA8HP0CJ92 632 aa12.84□□□□□ -0.35
COL11A1-207ENST00000465209 TXNP10599 105 aaKnown RBP12.84□□□□□ -0.35
COL11A1-207ENST00000465209 RBL2Q08999 1139 aa12.84□□□□□ -0.35
COL11A1-207ENST00000465209 USH1GQ495M9 461 aa12.84□□□□□ -0.35
COL11A1-207ENST00000465209 GPATCH4Q5T3I0 446 aaKnown RBP12.84□□□□□ -0.35
COL11A1-207ENST00000465209 KRT40Q6A162 431 aa12.84□□□□□ -0.35
COL11A1-207ENST00000465209 NECAB3Q96P71 396 aaPredicted RBP12.84□□□□□ -0.35
COL11A1-207ENST00000465209 CRBNQ96SW2 442 aa12.84□□□□□ -0.35
COL11A1-207ENST00000465209 MAF1Q9H063 256 aa12.84□□□□□ -0.35
COL11A1-207ENST00000465209 MICAL3Q7RTP6 2002 aa12.84□□□□□ -0.35
COL11A1-207ENST00000465209 OPLAHO14841 1288 aa12.83□□□□□ -0.36
COL11A1-207ENST00000465209 BAIAP3O94812 1187 aa12.83□□□□□ -0.36
COL11A1-207ENST00000465209 KCNQ1P51787 676 aa12.83□□□□□ -0.36
COL11A1-207ENST00000465209 CDC37Q16543 378 aaPredicted RBP12.83□□□□□ -0.36
COL11A1-207ENST00000465209 TCTN1Q2MV58 587 aa12.83□□□□□ -0.36
COL11A1-207ENST00000465209 FAM47CQ5HY64 1035 aa12.83□□□□□ -0.36
COL11A1-207ENST00000465209 GDF6Q6KF10 455 aaPredicted RBP12.83□□□□□ -0.36
COL11A1-207ENST00000465209 MFSD6Q6ZSS7 791 aa12.83□□□□□ -0.36
COL11A1-207ENST00000465209 DGKHQ86XP1 1220 aa12.83□□□□□ -0.36
COL11A1-207ENST00000465209 HERC6Q8IVU3 1022 aa12.83□□□□□ -0.36
COL11A1-207ENST00000465209 SYTL5Q8TDW5 730 aaPredicted RBP12.83□□□□□ -0.36
COL11A1-207ENST00000465209 AFG1LQ8WV93 481 aa12.83□□□□□ -0.36
COL11A1-207ENST00000465209 ANKS1AQ92625 1134 aa12.83□□□□□ -0.36
COL11A1-207ENST00000465209 ZKSCAN3Q9BRR0 538 aa12.83□□□□□ -0.36
COL11A1-207ENST00000465209 UBA5Q9GZZ9 404 aa12.83□□□□□ -0.36
COL11A1-207ENST00000465209 GPHNQ9NQX3 736 aaPredicted RBP12.83□□□□□ -0.36
COL11A1-207ENST00000465209 CXCL10P02778 98 aa12.82□□□□□ -0.36
COL11A1-207ENST00000465209 ACTN1P12814 892 aa12.82□□□□□ -0.36
COL11A1-207ENST00000465209 GHRHRQ02643 423 aa12.82□□□□□ -0.36
COL11A1-207ENST00000465209 BFSP2Q13515 415 aa12.82□□□□□ -0.36
COL11A1-207ENST00000465209 LY6KQ17RY6 165 aa12.82□□□□□ -0.36
COL11A1-207ENST00000465209 BRDTQ58F21 947 aaPredicted RBP12.82□□□□□ -0.36
COL11A1-207ENST00000465209 TRAF7Q6Q0C0 670 aa12.82□□□□□ -0.36
COL11A1-207ENST00000465209 ADGRF4Q8IZF3 695 aa12.82□□□□□ -0.36
COL11A1-207ENST00000465209 MICALL1Q8N3F8 863 aa12.82□□□□□ -0.36
COL11A1-207ENST00000465209 PNMA1Q8ND90 353 aa12.82□□□□□ -0.36
COL11A1-207ENST00000465209 CAGE1Q8TC20 777 aa12.82□□□□□ -0.36
COL11A1-207ENST00000465209 AFAP1L1Q8TED9 768 aa12.82□□□□□ -0.36
COL11A1-207ENST00000465209 EMID1Q96A84 441 aaPredicted RBP12.82□□□□□ -0.36
COL11A1-207ENST00000465209 TAAR1Q96RJ0 339 aa12.82□□□□□ -0.36
COL11A1-207ENST00000465209 MPHOSPH6Q99547 160 aaKnown RBP12.82□□□□□ -0.36
COL11A1-207ENST00000465209 CERS4Q9HA82 394 aa12.82□□□□□ -0.36
COL11A1-207ENST00000465209 ABCB11O95342 1321 aa12.82□□□□□ -0.36
COL11A1-207ENST00000465209 LCHNA4D1U4 455 aa12.81□□□□□ -0.36
COL11A1-207ENST00000465209 HAS3O00219 553 aa12.81□□□□□ -0.36
COL11A1-207ENST00000465209 NBNO60934 754 aa12.81□□□□□ -0.36
COL11A1-207ENST00000465209 HOXD8P13378 290 aaPredicted RBP12.81□□□□□ -0.36
COL11A1-207ENST00000465209 SDSP20132 328 aa12.81□□□□□ -0.36
COL11A1-207ENST00000465209 NT5C2P49902 561 aa12.81□□□□□ -0.36
COL11A1-207ENST00000465209 WDR5P61964 334 aaKnown RBP12.81□□□□□ -0.36
COL11A1-207ENST00000465209 MKRN4PQ13434 485 aaPredicted RBP12.81□□□□□ -0.36
COL11A1-207ENST00000465209 PTGISQ16647 500 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms