RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 CDC37Q16543 378 aaPredicted RBP26.64■■□□□ 1.86
USP42-205ENST00000465073 NBPF20Q3BBV1 942 aa26.64■■□□□ 1.86
USP42-205ENST00000465073 ASPRV1Q53RT3 343 aa26.64■■□□□ 1.86
USP42-205ENST00000465073 SCLYQ96I15 445 aa26.64■■□□□ 1.86
USP42-205ENST00000465073 PRDM12Q9H4Q4 367 aa26.64■■□□□ 1.86
USP42-205ENST00000465073 CTNNA3Q9UI47 895 aa26.64■■□□□ 1.86
USP42-205ENST00000465073 SLC4A7Q9Y6M7 1214 aa26.64■■□□□ 1.86
USP42-205ENST00000465073 B4E1Z4 1266 aa26.63■■□□□ 1.85
USP42-205ENST00000465073 TTLL4Q14679 1199 aa26.63■■□□□ 1.85
USP42-205ENST00000465073 IMMTQ16891 758 aaKnown RBP26.63■■□□□ 1.85
USP42-205ENST00000465073 NFRKBQ6P4R8 1299 aa26.63■■□□□ 1.85
USP42-205ENST00000465073 ADGRF4Q8IZF3 695 aa26.63■■□□□ 1.85
USP42-205ENST00000465073 USP38Q8NB14 1042 aa26.63■■□□□ 1.85
USP42-205ENST00000465073 SYMPKQ92797 1274 aaKnown RBP26.63■■□□□ 1.85
USP42-205ENST00000465073 SLC28A3Q9HAS3 691 aa26.63■■□□□ 1.85
USP42-205ENST00000465073 ZSWIM5Q9P217 1185 aa26.63■■□□□ 1.85
USP42-205ENST00000465073 FAM47CQ5HY64 1035 aa26.62■■□□□ 1.85
USP42-205ENST00000465073 MCF2L2Q86YR7 1114 aa26.62■■□□□ 1.85
USP42-205ENST00000465073 ENAHQ8N8S7 591 aaPredicted RBP26.62■■□□□ 1.85
USP42-205ENST00000465073 COPS5Q92905 334 aa26.62■■□□□ 1.85
USP42-205ENST00000465073 VWCEQ96DN2 955 aa26.62■■□□□ 1.85
USP42-205ENST00000465073 NKX2-4Q9H2Z4 354 aa26.62■■□□□ 1.85
USP42-205ENST00000465073 PTPN11Q06124 597 aaPredicted RBP26.62■■□□□ 1.85
USP42-205ENST00000465073 NSUN6Q8TEA1 469 aaKnown RBP26.62■■□□□ 1.85
USP42-205ENST00000465073 KRT23Q9C075 422 aa26.62■■□□□ 1.85
USP42-205ENST00000465073 CHD9Q3L8U1 2897 aa26.61■■□□□ 1.85
USP42-205ENST00000465073 CCDC62Q6P9F0 684 aa26.61■■□□□ 1.85
USP42-205ENST00000465073 SYTL5Q8TDW5 730 aaPredicted RBP26.61■■□□□ 1.85
USP42-205ENST00000465073 TBC1D5Q92609 795 aa26.61■■□□□ 1.85
USP42-205ENST00000465073 CNNM2Q9H8M5 875 aa26.61■■□□□ 1.85
USP42-205ENST00000465073 YBX2Q9Y2T7 364 aaKnown RBP26.61■■□□□ 1.85
USP42-205ENST00000465073 VCANP13611 3396 aa26.6■■□□□ 1.85
USP42-205ENST00000465073 PARP1P09874 1014 aaKnown RBP26.6■■□□□ 1.85
USP42-205ENST00000465073 IWS1Q96ST2 819 aa26.6■■□□□ 1.85
USP42-205ENST00000465073 MRPL11Q9Y3B7 192 aaKnown RBP26.6■■□□□ 1.85
USP42-205ENST00000465073 ZBBXA8MT70 800 aa26.59■■□□□ 1.85
USP42-205ENST00000465073 ARIH2O95376 493 aa26.59■■□□□ 1.85
USP42-205ENST00000465073 RFC2P35250 354 aa26.59■■□□□ 1.85
USP42-205ENST00000465073 FBXO11Q86XK2 927 aa26.59■■□□□ 1.85
USP42-205ENST00000465073 EXOC6Q8TAG9 804 aa26.59■■□□□ 1.85
USP42-205ENST00000465073 TAAR1Q96RJ0 339 aa26.59■■□□□ 1.85
USP42-205ENST00000465073 UBAC1Q9BSL1 405 aa26.59■■□□□ 1.85
USP42-205ENST00000465073 PCDHA11Q9Y5I1 949 aa26.59■■□□□ 1.85
USP42-205ENST00000465073 SCN10AQ9Y5Y9 1956 aa26.58■■□□□ 1.85
USP42-205ENST00000465073 DHX16O60231 1041 aaKnown RBP26.58■■□□□ 1.85
USP42-205ENST00000465073 STXBP2Q15833 593 aa26.58■■□□□ 1.85
USP42-205ENST00000465073 QRICH1Q2TAL8 776 aa26.58■■□□□ 1.85
USP42-205ENST00000465073 RETREG2Q8NC44 543 aa26.58■■□□□ 1.85
USP42-205ENST00000465073 RMDN3Q96TC7 470 aa26.58■■□□□ 1.85
USP42-205ENST00000465073 JMJD4Q9H9V9 463 aa26.58■■□□□ 1.85
USP42-205ENST00000465073 TTC28Q96AY4 2481 aa26.58■■□□□ 1.85
USP42-205ENST00000465073 MYO9BQ13459 2157 aa26.58■■□□□ 1.85
USP42-205ENST00000465073 PITPNM1O00562 1244 aa26.57■■□□□ 1.84
USP42-205ENST00000465073 ATP2A2P16615 1042 aaKnown RBP26.57■■□□□ 1.84
USP42-205ENST00000465073 RABGGTBP53611 331 aa26.57■■□□□ 1.84
USP42-205ENST00000465073 ADGRE1Q14246 886 aa26.57■■□□□ 1.84
USP42-205ENST00000465073 TJAP1Q5JTD0 557 aa26.57■■□□□ 1.84
USP42-205ENST00000465073 DEFB128Q7Z7B8 93 aa26.57■■□□□ 1.84
USP42-205ENST00000465073 YTHDC1Q96MU7 727 aaKnown RBP26.57■■□□□ 1.84
USP42-205ENST00000465073 VAT1LQ9HCJ6 419 aa26.57■■□□□ 1.84
USP42-205ENST00000465073 COL20A1Q9P218 1284 aa26.57■■□□□ 1.84
USP42-205ENST00000465073 LAMA4Q16363 1823 aa26.57■■□□□ 1.84
USP42-205ENST00000465073 GH1P01241 217 aa26.56■■□□□ 1.84
USP42-205ENST00000465073 ACTN1P12814 892 aa26.56■■□□□ 1.84
USP42-205ENST00000465073 BFSP2Q13515 415 aa26.56■■□□□ 1.84
USP42-205ENST00000465073 SEPT14Q6ZU15 432 aa26.56■■□□□ 1.84
USP42-205ENST00000465073 AFG1LQ8WV93 481 aa26.56■■□□□ 1.84
USP42-205ENST00000465073 PPM1EQ8WY54 764 aa26.56■■□□□ 1.84
USP42-205ENST00000465073 NOD1Q9Y239 953 aa26.56■■□□□ 1.84
USP42-205ENST00000465073 IGFBP4P22692 258 aa26.55■■□□□ 1.84
USP42-205ENST00000465073 LY6KQ17RY6 165 aa26.55■■□□□ 1.84
USP42-205ENST00000465073 IQCF3P0C7M6 154 aa26.55■■□□□ 1.84
USP42-205ENST00000465073 ARHGAP1Q07960 439 aa26.55■■□□□ 1.84
USP42-205ENST00000465073 IFIT1BQ5T764 474 aaKnown RBP26.55■■□□□ 1.84
USP42-205ENST00000465073 ARHGEF16Q5VV41 709 aa26.55■■□□□ 1.84
USP42-205ENST00000465073 PPP2R2DQ66LE6 453 aa26.55■■□□□ 1.84
USP42-205ENST00000465073 PPP1R13LQ8WUF5 828 aa26.55■■□□□ 1.84
USP42-205ENST00000465073 EIF3JO75822 258 aaKnown RBP26.54■■□□□ 1.84
USP42-205ENST00000465073 MMP3P08254 477 aa26.54■■□□□ 1.84
USP42-205ENST00000465073 ATXN2LQ8WWM7 1075 aaKnown RBP26.54■■□□□ 1.84
USP42-205ENST00000465073 AMNQ9BXJ7 453 aa26.54■■□□□ 1.84
USP42-205ENST00000465073 PRDM6Q9NQX0 595 aa26.54■■□□□ 1.84
USP42-205ENST00000465073 MYOGP15173 224 aa26.53■■□□□ 1.84
USP42-205ENST00000465073 CASTP20810 708 aaKnown RBP26.53■■□□□ 1.84
USP42-205ENST00000465073 CHMP4BP1P59074 171 aa26.53■■□□□ 1.84
USP42-205ENST00000465073 SESTD1Q86VW0 696 aa26.53■■□□□ 1.84
USP42-205ENST00000465073 PHOSPHO2Q8TCD6 241 aa26.53■■□□□ 1.84
USP42-205ENST00000465073 NR3C2P08235 984 aa26.52■■□□□ 1.84
USP42-205ENST00000465073 SEC23AQ15436 765 aa26.52■■□□□ 1.84
USP42-205ENST00000465073 PTGISQ16647 500 aa26.52■■□□□ 1.84
USP42-205ENST00000465073 TMEM67Q5HYA8 995 aa26.52■■□□□ 1.84
USP42-205ENST00000465073 FTOQ9C0B1 505 aaKnown RBP eCLIP26.52■■□□□ 1.84
USP42-205ENST00000465073 KLRF2D3W0D1 207 aa26.51■■□□□ 1.83
USP42-205ENST00000465073 CFBP00751 764 aa26.51■■□□□ 1.83
USP42-205ENST00000465073 EIF2AK2P19525 551 aaKnown RBP26.51■■□□□ 1.83
USP42-205ENST00000465073 HSD17B4P51659 736 aa26.51■■□□□ 1.83
USP42-205ENST00000465073 DGKDQ16760 1214 aa26.51■■□□□ 1.83
USP42-205ENST00000465073 CHST3Q7LGC8 479 aa26.51■■□□□ 1.83
USP42-205ENST00000465073 STAG2Q8N3U4 1231 aa26.51■■□□□ 1.83
USP42-205ENST00000465073 CCDC155Q8N6L0 562 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms