RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 NAPAP54920 295 aa15.76■□□□□ 0.11
LIMD1-203ENST00000465039 PDE4DQ08499 809 aa15.76■□□□□ 0.11
LIMD1-203ENST00000465039 SSRP1Q08945 709 aaKnown RBP15.76■□□□□ 0.11
LIMD1-203ENST00000465039 AP3B2Q13367 1082 aa15.76■□□□□ 0.11
LIMD1-203ENST00000465039 GALNT17Q6IS24 598 aa15.76■□□□□ 0.11
LIMD1-203ENST00000465039 TRPV1Q8NER1 839 aa15.76■□□□□ 0.11
LIMD1-203ENST00000465039 WASF1Q92558 559 aa15.76■□□□□ 0.11
LIMD1-203ENST00000465039 DEFB118Q96PH6 123 aa15.76■□□□□ 0.11
LIMD1-203ENST00000465039 LLPHQ9BRT6 129 aaKnown RBP15.76■□□□□ 0.11
LIMD1-203ENST00000465039 ZMYND12Q9H0C1 365 aa15.76■□□□□ 0.11
LIMD1-203ENST00000465039 EHMT1Q9H9B1 1298 aa15.76■□□□□ 0.11
LIMD1-203ENST00000465039 NCOA5Q9HCD5 579 aaKnown RBP15.76■□□□□ 0.11
LIMD1-203ENST00000465039 PXMP2Q9NR77 195 aa15.76■□□□□ 0.11
LIMD1-203ENST00000465039 COL20A1Q9P218 1284 aa15.76■□□□□ 0.11
LIMD1-203ENST00000465039 FAM184BQ9ULE4 1060 aa15.76■□□□□ 0.11
LIMD1-203ENST00000465039 RBM47A0AV96 593 aaKnown RBP15.75■□□□□ 0.11
LIMD1-203ENST00000465039 MEIS2O14770 477 aa15.75■□□□□ 0.11
LIMD1-203ENST00000465039 EIF3JO75822 258 aaKnown RBP15.75■□□□□ 0.11
LIMD1-203ENST00000465039 RARBP10826 455 aa15.75■□□□□ 0.11
LIMD1-203ENST00000465039 GNA11P29992 359 aa15.75■□□□□ 0.11
LIMD1-203ENST00000465039 CCND3P30281 292 aaPredicted RBP15.75■□□□□ 0.11
LIMD1-203ENST00000465039 ADCY7P51828 1080 aa15.75■□□□□ 0.11
LIMD1-203ENST00000465039 NKX3-2P78367 333 aa15.75■□□□□ 0.11
LIMD1-203ENST00000465039 STXBP2Q15833 593 aa15.75■□□□□ 0.11
LIMD1-203ENST00000465039 PKN1Q16512 942 aa15.75■□□□□ 0.11
LIMD1-203ENST00000465039 ME3Q16798 604 aa15.75■□□□□ 0.11
LIMD1-203ENST00000465039 ARHGEF16Q5VV41 709 aa15.75■□□□□ 0.11
LIMD1-203ENST00000465039 LHX8Q68G74 356 aa15.75■□□□□ 0.11
LIMD1-203ENST00000465039 IQSEC1Q6DN90 963 aa15.75■□□□□ 0.11
LIMD1-203ENST00000465039 SMARCC2Q8TAQ2 1214 aa15.75■□□□□ 0.11
LIMD1-203ENST00000465039 BICD2Q8TD16 824 aa15.75■□□□□ 0.11
LIMD1-203ENST00000465039 PIBF1Q8WXW3 757 aa15.75■□□□□ 0.11
LIMD1-203ENST00000465039 PDCD2LQ9BRP1 358 aa15.75■□□□□ 0.11
LIMD1-203ENST00000465039 SLC26A6Q9BXS9 759 aa15.75■□□□□ 0.11
LIMD1-203ENST00000465039 Q9Y3F1 56 aa15.75■□□□□ 0.11
LIMD1-203ENST00000465039 NKRFO15226 690 aaKnown RBP eCLIP15.74■□□□□ 0.11
LIMD1-203ENST00000465039 DUSP11O75319 330 aaKnown RBP15.74■□□□□ 0.11
LIMD1-203ENST00000465039 XBP1P17861 261 aa15.74■□□□□ 0.11
LIMD1-203ENST00000465039 IFFO2Q5TF58 517 aa15.74■□□□□ 0.11
LIMD1-203ENST00000465039 KCNV1Q6PIU1 500 aa15.74■□□□□ 0.11
LIMD1-203ENST00000465039 ARRDC4Q8NCT1 418 aa15.74■□□□□ 0.11
LIMD1-203ENST00000465039 SCFD2Q8WU76 684 aa15.74■□□□□ 0.11
LIMD1-203ENST00000465039 TBC1D5Q92609 795 aa15.74■□□□□ 0.11
LIMD1-203ENST00000465039 GPKOWQ92917 476 aaPredicted RBP eCLIP15.74■□□□□ 0.11
LIMD1-203ENST00000465039 PHKBQ93100 1093 aa15.74■□□□□ 0.11
LIMD1-203ENST00000465039 SHISA4Q96DD7 197 aa15.74■□□□□ 0.11
LIMD1-203ENST00000465039 TAAR1Q96RJ0 339 aa15.74■□□□□ 0.11
LIMD1-203ENST00000465039 C6orf50Q9HD87 102 aa15.74■□□□□ 0.11
LIMD1-203ENST00000465039 ZHX1Q9UKY1 873 aaPredicted RBP15.74■□□□□ 0.11
LIMD1-203ENST00000465039 hCG_1642624A0A1W2PR95 340 aa15.73■□□□□ 0.11
LIMD1-203ENST00000465039 POTEFA5A3E0 1075 aa15.73■□□□□ 0.11
LIMD1-203ENST00000465039 SPDYE3A6NKU9 549 aa15.73■□□□□ 0.11
LIMD1-203ENST00000465039 NR3C2P08235 984 aa15.73■□□□□ 0.11
LIMD1-203ENST00000465039 CST5P28325 142 aaPredicted RBP15.73■□□□□ 0.11
LIMD1-203ENST00000465039 CNGA1P29973 690 aa15.73■□□□□ 0.11
LIMD1-203ENST00000465039 HOXA13P31271 388 aaPredicted RBP15.73■□□□□ 0.11
LIMD1-203ENST00000465039 STK3Q13188 491 aa15.73■□□□□ 0.11
LIMD1-203ENST00000465039 CCDC144BQ3MJ40 725 aa15.73■□□□□ 0.11
LIMD1-203ENST00000465039 PCNX4Q63HM2 1172 aa15.73■□□□□ 0.11
LIMD1-203ENST00000465039 TYW1BQ6NUM6 668 aa15.73■□□□□ 0.11
LIMD1-203ENST00000465039 UBE2Q1Q7Z7E8 422 aa15.73■□□□□ 0.11
LIMD1-203ENST00000465039 VSIG10LQ86VR7 867 aa15.73■□□□□ 0.11
LIMD1-203ENST00000465039 SMCO2A6NFE2 343 aa15.72■□□□□ 0.11
LIMD1-203ENST00000465039 DNM1LO00429 736 aa15.72■□□□□ 0.11
LIMD1-203ENST00000465039 TGFB3P10600 412 aa15.72■□□□□ 0.11
LIMD1-203ENST00000465039 CCND2P30279 289 aa15.72■□□□□ 0.11
LIMD1-203ENST00000465039 CLK2P49760 499 aaKnown RBP15.72■□□□□ 0.11
LIMD1-203ENST00000465039 SOX10P56693 466 aa15.72■□□□□ 0.11
LIMD1-203ENST00000465039 PGM5Q15124 567 aa15.72■□□□□ 0.11
LIMD1-203ENST00000465039 GNPTABQ3T906 1256 aa15.72■□□□□ 0.11
LIMD1-203ENST00000465039 TAPT1Q6NXT6 567 aa15.72■□□□□ 0.11
LIMD1-203ENST00000465039 REXO1Q8N1G1 1221 aaKnown RBP15.72■□□□□ 0.11
LIMD1-203ENST00000465039 DAGLBQ8NCG7 672 aa15.72■□□□□ 0.11
LIMD1-203ENST00000465039 UPF3AQ9H1J1 476 aaKnown RBP15.72■□□□□ 0.11
LIMD1-203ENST00000465039 SPC25Q9HBM1 224 aa15.72■□□□□ 0.11
LIMD1-203ENST00000465039 KIAA1217Q5T5P2 1943 aa15.72■□□□□ 0.11
LIMD1-203ENST00000465039 TFRCP02786 760 aaKnown RBP15.71■□□□□ 0.11
LIMD1-203ENST00000465039 EIF2AK2P19525 551 aaKnown RBP15.71■□□□□ 0.11
LIMD1-203ENST00000465039 HMGN5P82970 282 aaKnown RBP15.71■□□□□ 0.11
LIMD1-203ENST00000465039 TNFAIP2Q03169 654 aa15.71■□□□□ 0.11
LIMD1-203ENST00000465039 TTLL4Q14679 1199 aa15.71■□□□□ 0.11
LIMD1-203ENST00000465039 DUSP28Q4G0W2 176 aa15.71■□□□□ 0.11
LIMD1-203ENST00000465039 PRAMEF19Q5SWL8 479 aa15.71■□□□□ 0.11
LIMD1-203ENST00000465039 USP17L6PQ6QN14 398 aa15.71■□□□□ 0.11
LIMD1-203ENST00000465039 RNF180Q86T96 592 aa15.71■□□□□ 0.11
LIMD1-203ENST00000465039 FBXO16Q8IX29 292 aaPredicted RBP15.71■□□□□ 0.11
LIMD1-203ENST00000465039 NSUN7Q8NE18 718 aaKnown RBP15.71■□□□□ 0.11
LIMD1-203ENST00000465039 INPP4AQ96PE3 977 aaPredicted RBP15.71■□□□□ 0.11
LIMD1-203ENST00000465039 PURBQ96QR8 312 aaKnown RBP15.71■□□□□ 0.11
LIMD1-203ENST00000465039 LARP6Q9BRS8 491 aaKnown RBP15.71■□□□□ 0.11
LIMD1-203ENST00000465039 XPNPEP3Q9NQH7 507 aa15.71■□□□□ 0.11
LIMD1-203ENST00000465039 ADAMTS4O75173 837 aa15.7■□□□□ 0.1
LIMD1-203ENST00000465039 FARP2O94887 1054 aaPredicted RBP15.7■□□□□ 0.1
LIMD1-203ENST00000465039 LARGE1O95461 756 aa15.7■□□□□ 0.1
LIMD1-203ENST00000465039 CTDNEP1O95476 244 aa15.7■□□□□ 0.1
LIMD1-203ENST00000465039 MYCP01106 439 aaPredicted RBP15.7■□□□□ 0.1
LIMD1-203ENST00000465039 GJA9P57773 515 aa15.7■□□□□ 0.1
LIMD1-203ENST00000465039 FCHSD1Q86WN1 690 aa15.7■□□□□ 0.1
LIMD1-203ENST00000465039 CDHR1Q96JP9 859 aa15.7■□□□□ 0.1
LIMD1-203ENST00000465039 TSEN34Q9BSV6 310 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms