RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 MMP19Q99542 508 aa24.1■■□□□ 1.45
CD58-204ENST00000464088 PLXNA1Q9UIW2 1896 aa24.1■■□□□ 1.45
CD58-204ENST00000464088 CCDC196A0A1B0GTZ2 297 aa24.09■■□□□ 1.45
CD58-204ENST00000464088 KIAA0355O15063 1070 aa24.09■■□□□ 1.45
CD58-204ENST00000464088 CLTBP09497 229 aa24.09■■□□□ 1.45
CD58-204ENST00000464088 RABEP1Q15276 862 aa24.09■■□□□ 1.45
CD58-204ENST00000464088 NTRK3Q16288 839 aa24.09■■□□□ 1.45
CD58-204ENST00000464088 MAML3Q96JK9 1138 aa24.09■■□□□ 1.45
CD58-204ENST00000464088 AMNQ9BXJ7 453 aa24.09■■□□□ 1.45
CD58-204ENST00000464088 NRBP1Q9UHY1 535 aa24.09■■□□□ 1.45
CD58-204ENST00000464088 ABCB11O95342 1321 aa24.09■■□□□ 1.45
CD58-204ENST00000464088 LCTP09848 1927 aa24.08■■□□□ 1.45
CD58-204ENST00000464088 MYCNP04198 464 aaPredicted RBP24.08■■□□□ 1.45
CD58-204ENST00000464088 CCT2P78371 535 aaKnown RBP24.08■■□□□ 1.45
CD58-204ENST00000464088 KCTD2Q14681 263 aa24.08■■□□□ 1.45
CD58-204ENST00000464088 GRIN2CQ14957 1233 aa24.08■■□□□ 1.45
CD58-204ENST00000464088 USH1GQ495M9 461 aa24.08■■□□□ 1.45
CD58-204ENST00000464088 CCDC82Q8N4S0 544 aa24.08■■□□□ 1.45
CD58-204ENST00000464088 RRP36Q96EU6 259 aaKnown RBP24.08■■□□□ 1.45
CD58-204ENST00000464088 NCOA5Q9HCD5 579 aaKnown RBP24.08■■□□□ 1.45
CD58-204ENST00000464088 A1CFQ9NQ94 594 aaKnown RBP24.08■■□□□ 1.45
CD58-204ENST00000464088 DNAJC25-GNG10A0A024R161 153 aa24.07■■□□□ 1.44
CD58-204ENST00000464088 TNFRSF10AO00220 468 aa24.07■■□□□ 1.44
CD58-204ENST00000464088 NFIBO00712 420 aa24.07■■□□□ 1.44
CD58-204ENST00000464088 USP38Q8NB14 1042 aa24.07■■□□□ 1.44
CD58-204ENST00000464088 PIBF1Q8WXW3 757 aa24.07■■□□□ 1.44
CD58-204ENST00000464088 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.06■■□□□ 1.44
CD58-204ENST00000464088 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.06■■□□□ 1.44
CD58-204ENST00000464088 COL9A1P20849 921 aa24.06■■□□□ 1.44
CD58-204ENST00000464088 hCG_1642624A0A1W2PR95 340 aa24.05■■□□□ 1.44
CD58-204ENST00000464088 OPLAHO14841 1288 aa24.05■■□□□ 1.44
CD58-204ENST00000464088 PFKFB2O60825 505 aa24.05■■□□□ 1.44
CD58-204ENST00000464088 LARGE1O95461 756 aa24.05■■□□□ 1.44
CD58-204ENST00000464088 PGK2P07205 417 aa24.05■■□□□ 1.44
CD58-204ENST00000464088 DNAJB2P25686 324 aa24.05■■□□□ 1.44
CD58-204ENST00000464088 SCRN1Q12765 414 aa24.05■■□□□ 1.44
CD58-204ENST00000464088 STK3Q13188 491 aa24.05■■□□□ 1.44
CD58-204ENST00000464088 ME3Q16798 604 aa24.05■■□□□ 1.44
CD58-204ENST00000464088 ZNF792Q3KQV3 632 aa24.05■■□□□ 1.44
CD58-204ENST00000464088 ANKRD35Q8N283 1001 aa24.05■■□□□ 1.44
CD58-204ENST00000464088 XPNPEP3Q9NQH7 507 aa24.05■■□□□ 1.44
CD58-204ENST00000464088 CYP39A1Q9NYL5 469 aa24.05■■□□□ 1.44
CD58-204ENST00000464088 PCDHA1Q9Y5I3 950 aa24.05■■□□□ 1.44
CD58-204ENST00000464088 RARBP10826 455 aa24.04■■□□□ 1.44
CD58-204ENST00000464088 RAG1P15918 1043 aa24.04■■□□□ 1.44
CD58-204ENST00000464088 IFNAR1P17181 557 aa24.04■■□□□ 1.44
CD58-204ENST00000464088 FPGSQ05932 587 aa24.04■■□□□ 1.44
CD58-204ENST00000464088 NOL8Q76FK4 1167 aaKnown RBP24.04■■□□□ 1.44
CD58-204ENST00000464088 RNF180Q86T96 592 aa24.04■■□□□ 1.44
CD58-204ENST00000464088 RGS22Q8NE09 1264 aa24.04■■□□□ 1.44
CD58-204ENST00000464088 IL27Q8NEV9 243 aa24.04■■□□□ 1.44
CD58-204ENST00000464088 DDX11Q96FC9 970 aa24.04■■□□□ 1.44
CD58-204ENST00000464088 SLKQ9H2G2 1235 aaPredicted RBP24.04■■□□□ 1.44
CD58-204ENST00000464088 SEC63Q9UGP8 760 aaKnown RBP24.04■■□□□ 1.44
CD58-204ENST00000464088 DIS3Q9Y2L1 958 aaKnown RBP24.04■■□□□ 1.44
CD58-204ENST00000464088 MRPL11Q9Y3B7 192 aaKnown RBP24.04■■□□□ 1.44
CD58-204ENST00000464088 V9GY48 417 aaPredicted RBP24.04■■□□□ 1.44
CD58-204ENST00000464088 GHRHRQ02643 423 aa24.03■■□□□ 1.44
CD58-204ENST00000464088 TRAF1Q13077 416 aa24.03■■□□□ 1.44
CD58-204ENST00000464088 ANKRD33Q7Z3H0 272 aa24.03■■□□□ 1.44
CD58-204ENST00000464088 FAM133AQ8N9E0 248 aa24.03■■□□□ 1.44
CD58-204ENST00000464088 FGD4Q96M96 766 aa24.03■■□□□ 1.44
CD58-204ENST00000464088 TOX2Q96NM4 488 aa24.03■■□□□ 1.44
CD58-204ENST00000464088 MAF1Q9H063 256 aa24.03■■□□□ 1.44
CD58-204ENST00000464088 ZNF576Q9H609 170 aa24.03■■□□□ 1.44
CD58-204ENST00000464088 A0A1W2PQ45 241 aaPredicted RBP24.02■■□□□ 1.44
CD58-204ENST00000464088 A0A1W2PQY0 241 aa24.02■■□□□ 1.44
CD58-204ENST00000464088 NSMFQ6X4W1 530 aa24.02■■□□□ 1.44
CD58-204ENST00000464088 TBC1D5Q92609 795 aa24.02■■□□□ 1.44
CD58-204ENST00000464088 LIMCH1Q9UPQ0 1083 aa24.02■■□□□ 1.44
CD58-204ENST00000464088 PRPF3O43395 683 aaKnown RBP24.01■■□□□ 1.43
CD58-204ENST00000464088 FAAP100Q0VG06 881 aa24.01■■□□□ 1.43
CD58-204ENST00000464088 ST3GAL1Q11201 340 aa24.01■■□□□ 1.43
CD58-204ENST00000464088 BAATQ14032 418 aaPredicted RBP24.01■■□□□ 1.43
CD58-204ENST00000464088 SLC30A10Q6XR72 485 aa24.01■■□□□ 1.43
CD58-204ENST00000464088 PHKBQ93100 1093 aa24.01■■□□□ 1.43
CD58-204ENST00000464088 RNF26Q9BY78 433 aaPredicted RBP24.01■■□□□ 1.43
CD58-204ENST00000464088 TMEM39AQ9NV64 488 aa24.01■■□□□ 1.43
CD58-204ENST00000464088 PQBP1O60828 265 aaKnown RBP24■■□□□ 1.43
CD58-204ENST00000464088 PGK1P00558 417 aa24■■□□□ 1.43
CD58-204ENST00000464088 RPS6P62753 249 aaKnown RBP24■■□□□ 1.43
CD58-204ENST00000464088 CNTN2Q02246 1040 aa24■■□□□ 1.43
CD58-204ENST00000464088 PKN1Q16512 942 aa24■■□□□ 1.43
CD58-204ENST00000464088 RNF207Q6ZRF8 634 aa24■■□□□ 1.43
CD58-204ENST00000464088 MCF2L2Q86YR7 1114 aa24■■□□□ 1.43
CD58-204ENST00000464088 NECAB1Q8N987 351 aa24■■□□□ 1.43
CD58-204ENST00000464088 GTF3C6Q969F1 213 aa24■■□□□ 1.43
CD58-204ENST00000464088 TINF2Q9BSI4 451 aa24■■□□□ 1.43
CD58-204ENST00000464088 TSEN34Q9BSV6 310 aaKnown RBP24■■□□□ 1.43
CD58-204ENST00000464088 ASTN1O14525 1302 aa24■■□□□ 1.43
CD58-204ENST00000464088 MCM3APO60318 1980 aa24■■□□□ 1.43
CD58-204ENST00000464088 SOWAHBA6NEL2 793 aa23.99■■□□□ 1.43
CD58-204ENST00000464088 CD2BP2O95400 341 aaKnown RBP23.99■■□□□ 1.43
CD58-204ENST00000464088 CTDNEP1O95476 244 aa23.99■■□□□ 1.43
CD58-204ENST00000464088 PFKFB3Q16875 520 aaPredicted RBP23.99■■□□□ 1.43
CD58-204ENST00000464088 WWC2Q6AWC2 1192 aa23.99■■□□□ 1.43
CD58-204ENST00000464088 ZNF467Q7Z7K2 595 aaPredicted RBP23.99■■□□□ 1.43
CD58-204ENST00000464088 ATXN2LQ8WWM7 1075 aaKnown RBP23.99■■□□□ 1.43
CD58-204ENST00000464088 GPKOWQ92917 476 aaPredicted RBP eCLIP23.99■■□□□ 1.432e-11■■■■■ 35.2
CD58-204ENST00000464088 TIFAQ96CG3 184 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms