RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 POTEBQ6S5H4 581 aa13.15□□□□□ -0.3
SSR3-202ENST00000463503 MKL1Q969V6 931 aa13.15□□□□□ -0.3
SSR3-202ENST00000463503 CEP95Q96GE4 821 aa13.15□□□□□ -0.3
SSR3-202ENST00000463503 PURBQ96QR8 312 aaKnown RBP13.15□□□□□ -0.3
SSR3-202ENST00000463503 UIMC1Q96RL1 719 aa13.15□□□□□ -0.3
SSR3-202ENST00000463503 CTAGE1Q96RT6 745 aa13.15□□□□□ -0.3
SSR3-202ENST00000463503 VTA1Q9NP79 307 aa13.15□□□□□ -0.3
SSR3-202ENST00000463503 HELLSQ9NRZ9 838 aa13.15□□□□□ -0.3
SSR3-202ENST00000463503 CYP39A1Q9NYL5 469 aa13.15□□□□□ -0.3
SSR3-202ENST00000463503 SYNPO2Q9UMS6 1093 aa13.15□□□□□ -0.3
SSR3-202ENST00000463503 SLC4A4Q9Y6R1 1079 aa13.15□□□□□ -0.3
SSR3-202ENST00000463503 WDR87Q6ZQQ6 2873 aa13.15□□□□□ -0.3
SSR3-202ENST00000463503 LAMA4Q16363 1823 aa13.15□□□□□ -0.3
SSR3-202ENST00000463503 RAD50Q92878 1312 aa13.14□□□□□ -0.31
SSR3-202ENST00000463503 LINC01553A4QN01 128 aa13.14□□□□□ -0.31
SSR3-202ENST00000463503 GRXCR2A6NFK2 248 aa13.14□□□□□ -0.31
SSR3-202ENST00000463503 DCXO43602 365 aa13.14□□□□□ -0.31
SSR3-202ENST00000463503 CHMLP26374 656 aa13.14□□□□□ -0.31
SSR3-202ENST00000463503 SSTR3P32745 418 aaPredicted RBP13.14□□□□□ -0.31
SSR3-202ENST00000463503 ERVK-21P61565 698 aa13.14□□□□□ -0.31
SSR3-202ENST00000463503 TCTN1Q2MV58 587 aa13.14□□□□□ -0.31
SSR3-202ENST00000463503 NBPF20Q3BBV1 942 aa13.14□□□□□ -0.31
SSR3-202ENST00000463503 SBK1Q52WX2 424 aa13.14□□□□□ -0.31
SSR3-202ENST00000463503 MUM1L1Q5H9M0 696 aa13.14□□□□□ -0.31
SSR3-202ENST00000463503 PTCRAQ6ISU1 281 aaPredicted RBP13.14□□□□□ -0.31
SSR3-202ENST00000463503 NEK9Q8TD19 979 aa13.14□□□□□ -0.31
SSR3-202ENST00000463503 PHOX2BQ99453 314 aa13.14□□□□□ -0.31
SSR3-202ENST00000463503 PUS7LQ9H0K6 701 aaKnown RBP13.14□□□□□ -0.31
SSR3-202ENST00000463503 POLR3EQ9NVU0 708 aa13.14□□□□□ -0.31
SSR3-202ENST00000463503 CLIP2Q9UDT6 1046 aa13.14□□□□□ -0.31
SSR3-202ENST00000463503 MTUS1Q9ULD2 1270 aa13.14□□□□□ -0.31
SSR3-202ENST00000463503 CTDP1Q9Y5B0 961 aaPredicted RBP13.14□□□□□ -0.31
SSR3-202ENST00000463503 ZFHX2Q9C0A1 2572 aaPredicted RBP13.13□□□□□ -0.31
SSR3-202ENST00000463503 KCNJ6P48051 423 aa13.13□□□□□ -0.31
SSR3-202ENST00000463503 STAT2P52630 851 aa13.13□□□□□ -0.31
SSR3-202ENST00000463503 CSPP1Q1MSJ5 1256 aa13.13□□□□□ -0.31
SSR3-202ENST00000463503 NFRKBQ6P4R8 1299 aa13.13□□□□□ -0.31
SSR3-202ENST00000463503 KIAA1211Q6ZU35 1233 aa13.13□□□□□ -0.31
SSR3-202ENST00000463503 DDRGK1Q96HY6 314 aa13.13□□□□□ -0.31
SSR3-202ENST00000463503 TRERF1Q96PN7 1200 aa13.13□□□□□ -0.31
SSR3-202ENST00000463503 MTG1Q9BT17 334 aaPredicted RBP13.13□□□□□ -0.31
SSR3-202ENST00000463503 FTOQ9C0B1 505 aaKnown RBP eCLIP13.13□□□□□ -0.31
SSR3-202ENST00000463503 MTMR4Q9NYA4 1195 aa13.13□□□□□ -0.31
SSR3-202ENST00000463503 RBM47A0AV96 593 aaKnown RBP13.12□□□□□ -0.31
SSR3-202ENST00000463503 CDC45O75419 566 aa13.12□□□□□ -0.31
SSR3-202ENST00000463503 GJB5O95377 273 aa13.12□□□□□ -0.31
SSR3-202ENST00000463503 MYL3P08590 195 aa13.12□□□□□ -0.31
SSR3-202ENST00000463503 FDX1P10109 184 aa13.12□□□□□ -0.31
SSR3-202ENST00000463503 BMP3P12645 472 aa13.12□□□□□ -0.31
SSR3-202ENST00000463503 CPT1AP50416 773 aa13.12□□□□□ -0.31
SSR3-202ENST00000463503 ZP2Q05996 745 aa13.12□□□□□ -0.31
SSR3-202ENST00000463503 TKFCQ3LXA3 575 aa13.12□□□□□ -0.31
SSR3-202ENST00000463503 MCMDC2Q4G0Z9 681 aa13.12□□□□□ -0.31
SSR3-202ENST00000463503 FAM47CQ5HY64 1035 aa13.12□□□□□ -0.31
SSR3-202ENST00000463503 HFE2Q6ZVN8 426 aa13.12□□□□□ -0.31
SSR3-202ENST00000463503 RASGRP2Q7LDG7 609 aa13.12□□□□□ -0.31
SSR3-202ENST00000463503 STK11IPQ8N1F8 1099 aa13.12□□□□□ -0.31
SSR3-202ENST00000463503 RUFY2Q8WXA3 655 aa13.12□□□□□ -0.31
SSR3-202ENST00000463503 OSBP2Q969R2 916 aa13.12□□□□□ -0.31
SSR3-202ENST00000463503 TGS1Q96RS0 853 aaKnown RBP13.12□□□□□ -0.31
SSR3-202ENST00000463503 EPB41L4AQ9HCS5 686 aaPredicted RBP13.12□□□□□ -0.31
SSR3-202ENST00000463503 DIAPH3Q9NSV4 1193 aa13.12□□□□□ -0.31
SSR3-202ENST00000463503 GSG1L2A8MUP6 293 aa13.11□□□□□ -0.31
SSR3-202ENST00000463503 TMEM232C9JQI7 657 aa13.11□□□□□ -0.31
SSR3-202ENST00000463503 TTLL1O95922 423 aa13.11□□□□□ -0.31
SSR3-202ENST00000463503 CXCL10P02778 98 aa13.11□□□□□ -0.31
SSR3-202ENST00000463503 ALAS1P13196 640 aa13.11□□□□□ -0.31
SSR3-202ENST00000463503 GNAT2P19087 354 aa13.11□□□□□ -0.31
SSR3-202ENST00000463503 MFAP1P55081 439 aaKnown RBP13.11□□□□□ -0.31
SSR3-202ENST00000463503 BFSP2Q13515 415 aa13.11□□□□□ -0.31
SSR3-202ENST00000463503 COL19A1Q14993 1142 aa13.11□□□□□ -0.31
SSR3-202ENST00000463503 SLFN13Q68D06 897 aa13.11□□□□□ -0.31
SSR3-202ENST00000463503 AFAP1L1Q8TED9 768 aa13.11□□□□□ -0.31
SSR3-202ENST00000463503 DHX38Q92620 1227 aaKnown RBP13.11□□□□□ -0.31
SSR3-202ENST00000463503 GMCL1Q96IK5 515 aa13.11□□□□□ -0.31
SSR3-202ENST00000463503 WDR11Q9BZH6 1224 aa13.11□□□□□ -0.31
SSR3-202ENST00000463503 A0A0D9SFI3 127 aa13.1□□□□□ -0.31
SSR3-202ENST00000463503 C19orf67A6NJJ6 358 aa13.1□□□□□ -0.31
SSR3-202ENST00000463503 H3BQ06 376 aaPredicted RBP13.1□□□□□ -0.31
SSR3-202ENST00000463503 EIF5BO60841 1220 aaKnown RBP13.1□□□□□ -0.31
SSR3-202ENST00000463503 PRDM1O75626 825 aa13.1□□□□□ -0.31
SSR3-202ENST00000463503 ALDH5A1P51649 535 aaPredicted RBP13.1□□□□□ -0.31
SSR3-202ENST00000463503 PTPN11Q06124 597 aaPredicted RBP13.1□□□□□ -0.31
SSR3-202ENST00000463503 RBL2Q08999 1139 aa13.1□□□□□ -0.31
SSR3-202ENST00000463503 NMIQ13287 307 aaPredicted RBP13.1□□□□□ -0.31
SSR3-202ENST00000463503 MKRN4PQ13434 485 aaPredicted RBP13.1□□□□□ -0.31
SSR3-202ENST00000463503 CNKSR3Q6P9H4 555 aa13.1□□□□□ -0.31
SSR3-202ENST00000463503 CASC1Q6TDU7 716 aa13.1□□□□□ -0.31
SSR3-202ENST00000463503 RETREG2Q8NC44 543 aa13.1□□□□□ -0.31
SSR3-202ENST00000463503 OR6J1Q8NGC5 347 aa13.1□□□□□ -0.31
SSR3-202ENST00000463503 STRBPQ96SI9 672 aaKnown RBP13.1□□□□□ -0.31
SSR3-202ENST00000463503 MKNK2Q9HBH9 465 aa13.1□□□□□ -0.31
SSR3-202ENST00000463503 DMXL1Q9Y485 3027 aa13.09□□□□□ -0.31
SSR3-202ENST00000463503 A6NJR5 290 aa13.09□□□□□ -0.31
SSR3-202ENST00000463503 SGSM2O43147 1006 aa13.09□□□□□ -0.31
SSR3-202ENST00000463503 EPB41L2O43491 1005 aaKnown RBP13.09□□□□□ -0.31
SSR3-202ENST00000463503 PLA2G6O60733 806 aa13.09□□□□□ -0.31
SSR3-202ENST00000463503 NBNO60934 754 aa13.09□□□□□ -0.31
SSR3-202ENST00000463503 SNAP25P60880 206 aa13.09□□□□□ -0.31
SSR3-202ENST00000463503 PUS10Q3MIT2 529 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms