RNA–Protein interactions for RNA: ENST00000463094.5

MSH5-210, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-210ENST00000463094 CALM1P0DP23 149 aa23.06■■□□□ 1.28
MSH5-210ENST00000463094 CALM2P0DP24 149 aa23.06■■□□□ 1.28
MSH5-210ENST00000463094 CALM3P0DP25 149 aa23.06■■□□□ 1.28
MSH5-210ENST00000463094 GNAQP50148 359 aa23.06■■□□□ 1.28
MSH5-210ENST00000463094 TROAPQ12815 778 aa23.06■■□□□ 1.28
MSH5-210ENST00000463094 SYNE3Q6ZMZ3 975 aa23.06■■□□□ 1.28
MSH5-210ENST00000463094 SEPT14Q6ZU15 432 aa23.06■■□□□ 1.28
MSH5-210ENST00000463094 ZNF654Q8IZM8 581 aa23.06■■□□□ 1.28
MSH5-210ENST00000463094 TBC1D5Q92609 795 aa23.06■■□□□ 1.28
MSH5-210ENST00000463094 PIGSQ96S52 555 aa23.06■■□□□ 1.28
MSH5-210ENST00000463094 LZTS2Q9BRK4 669 aa23.06■■□□□ 1.28
MSH5-210ENST00000463094 RIOX1Q9H6W3 641 aa23.06■■□□□ 1.28
MSH5-210ENST00000463094 LRRC37A2A6NM11 1700 aa23.05■■□□□ 1.28
MSH5-210ENST00000463094 PNMA6FA0A0J9YX94 578 aa23.05■■□□□ 1.28
MSH5-210ENST00000463094 KPNA6O60684 536 aa23.05■■□□□ 1.28
MSH5-210ENST00000463094 TIMP1P01033 207 aa23.05■■□□□ 1.28
MSH5-210ENST00000463094 EIF2AK2P19525 551 aaKnown RBP23.05■■□□□ 1.28
MSH5-210ENST00000463094 CDK7P50613 346 aa23.05■■□□□ 1.28
MSH5-210ENST00000463094 ANTXR2P58335 489 aa23.05■■□□□ 1.28
MSH5-210ENST00000463094 MTMR8Q96EF0 704 aa23.05■■□□□ 1.28
MSH5-210ENST00000463094 RRP36Q96EU6 259 aaKnown RBP23.05■■□□□ 1.28
MSH5-210ENST00000463094 MAP3K14Q99558 947 aa23.05■■□□□ 1.28
MSH5-210ENST00000463094 LY9Q9HBG7 655 aa23.05■■□□□ 1.28
MSH5-210ENST00000463094 SENP2Q9HC62 589 aa23.05■■□□□ 1.28
MSH5-210ENST00000463094 GCOM1H8Y6P7 765 aaPredicted RBP23.04■■□□□ 1.28
MSH5-210ENST00000463094 POLR2MP0CAP2 368 aa23.04■■□□□ 1.28
MSH5-210ENST00000463094 NECTIN1Q15223 517 aa23.04■■□□□ 1.28
MSH5-210ENST00000463094 SKAP1Q86WV1 359 aa23.04■■□□□ 1.28
MSH5-210ENST00000463094 FAM126BQ8IXS8 530 aa23.04■■□□□ 1.28
MSH5-210ENST00000463094 TMEM199Q8N511 208 aa23.04■■□□□ 1.28
MSH5-210ENST00000463094 PIBF1Q8WXW3 757 aa23.04■■□□□ 1.28
MSH5-210ENST00000463094 SLC12A7Q9Y666 1083 aa23.04■■□□□ 1.28
MSH5-210ENST00000463094 EIF3JO75822 258 aaKnown RBP23.03■■□□□ 1.28
MSH5-210ENST00000463094 PTGS1P23219 599 aa23.03■■□□□ 1.28
MSH5-210ENST00000463094 HSD17B4P51659 736 aa23.03■■□□□ 1.28
MSH5-210ENST00000463094 SHHQ15465 462 aa23.03■■□□□ 1.28
MSH5-210ENST00000463094 TMEM63BQ5T3F8 832 aa23.03■■□□□ 1.28
MSH5-210ENST00000463094 MTG1Q9BT17 334 aaPredicted RBP23.03■■□□□ 1.28
MSH5-210ENST00000463094 PXMP2Q9NR77 195 aa23.03■■□□□ 1.28
MSH5-210ENST00000463094 COL20A1Q9P218 1284 aa23.03■■□□□ 1.28
MSH5-210ENST00000463094 PPIGQ13427 754 aaKnown RBP eCLIP23.02■■□□□ 1.283e-7■■■■□ 24.6
MSH5-210ENST00000463094 DEFB123Q8N688 67 aa23.02■■□□□ 1.28
MSH5-210ENST00000463094 CUL5Q93034 780 aa23.02■■□□□ 1.28
MSH5-210ENST00000463094 RNPC3Q96LT9 517 aaKnown RBP23.02■■□□□ 1.28
MSH5-210ENST00000463094 MYL10Q9BUA6 226 aa23.02■■□□□ 1.28
MSH5-210ENST00000463094 PPP1R12CQ9BZL4 782 aa23.02■■□□□ 1.28
MSH5-210ENST00000463094 TBX21Q9UL17 535 aa23.02■■□□□ 1.28
MSH5-210ENST00000463094 MRVI1Q9Y6F6 885 aa23.02■■□□□ 1.28
MSH5-210ENST00000463094 LCTP09848 1927 aa23.02■■□□□ 1.28
MSH5-210ENST00000463094 LTBP2Q14767 1821 aa23.01■■□□□ 1.27
MSH5-210ENST00000463094 SH2B2O14492 632 aaPredicted RBP23.01■■□□□ 1.27
MSH5-210ENST00000463094 PPP1R11O60927 126 aaPredicted RBP23.01■■□□□ 1.27
MSH5-210ENST00000463094 GH1P01241 217 aa23.01■■□□□ 1.27
MSH5-210ENST00000463094 NR3C2P08235 984 aa23.01■■□□□ 1.27
MSH5-210ENST00000463094 SUPT20HL2P0C7V6 817 aa23.01■■□□□ 1.27
MSH5-210ENST00000463094 MYCLP12524 364 aaPredicted RBP23.01■■□□□ 1.27
MSH5-210ENST00000463094 HOXA13P31271 388 aaPredicted RBP23.01■■□□□ 1.27
MSH5-210ENST00000463094 LIFRP42702 1097 aa23.01■■□□□ 1.27
MSH5-210ENST00000463094 PSMC6P62333 389 aa23.01■■□□□ 1.27
MSH5-210ENST00000463094 KRT32Q14532 448 aa23.01■■□□□ 1.27
MSH5-210ENST00000463094 FAM47CQ5HY64 1035 aa23.01■■□□□ 1.27
MSH5-210ENST00000463094 MFSD5Q6N075 450 aa23.01■■□□□ 1.27
MSH5-210ENST00000463094 NEK1Q96PY6 1258 aa23.01■■□□□ 1.27
MSH5-210ENST00000463094 SPZ1Q9BXG8 430 aa23.01■■□□□ 1.27
MSH5-210ENST00000463094 ITGB8P26012 769 aa23■■□□□ 1.27
MSH5-210ENST00000463094 SMARCA1P28370 1054 aa23■■□□□ 1.27
MSH5-210ENST00000463094 CHMP4BP1P59074 171 aa23■■□□□ 1.27
MSH5-210ENST00000463094 FGD1P98174 961 aa23■■□□□ 1.27
MSH5-210ENST00000463094 PURAQ00577 322 aaKnown RBP23■■□□□ 1.27
MSH5-210ENST00000463094 KCNV1Q6PIU1 500 aa23■■□□□ 1.27
MSH5-210ENST00000463094 FCHSD1Q86WN1 690 aa23■■□□□ 1.27
MSH5-210ENST00000463094 SLC43A3Q8NBI5 491 aa23■■□□□ 1.27
MSH5-210ENST00000463094 HIPK3Q9H422 1215 aa23■■□□□ 1.27
MSH5-210ENST00000463094 CYTH3O43739 400 aa22.99■■□□□ 1.27
MSH5-210ENST00000463094 CCND2P30279 289 aa22.99■■□□□ 1.27
MSH5-210ENST00000463094 C9orf50Q5SZB4 431 aa22.99■■□□□ 1.27
MSH5-210ENST00000463094 COPS5Q92905 334 aa22.99■■□□□ 1.27
MSH5-210ENST00000463094 MYH6P13533 1939 aa22.99■■□□□ 1.27
MSH5-210ENST00000463094 DNAH12Q6ZR08 3092 aa22.98■■□□□ 1.27
MSH5-210ENST00000463094 A6NJR5 290 aa22.98■■□□□ 1.27
MSH5-210ENST00000463094 CD4P01730 458 aa22.98■■□□□ 1.27
MSH5-210ENST00000463094 GHRHRQ02643 423 aa22.98■■□□□ 1.27
MSH5-210ENST00000463094 LY6KQ17RY6 165 aa22.98■■□□□ 1.27
MSH5-210ENST00000463094 SMARCC2Q8TAQ2 1214 aa22.98■■□□□ 1.27
MSH5-210ENST00000463094 PDCD2LQ9BRP1 358 aa22.98■■□□□ 1.27
MSH5-210ENST00000463094 NOD1Q9Y239 953 aa22.98■■□□□ 1.27
MSH5-210ENST00000463094 OPLAHO14841 1288 aa22.97■■□□□ 1.27
MSH5-210ENST00000463094 ARIH2O95376 493 aa22.97■■□□□ 1.27
MSH5-210ENST00000463094 HMGB1P09429 215 aaKnown RBP22.97■■□□□ 1.27
MSH5-210ENST00000463094 CASTP20810 708 aaKnown RBP22.97■■□□□ 1.27
MSH5-210ENST00000463094 ZNF697Q5TEC3 545 aa22.97■■□□□ 1.27
MSH5-210ENST00000463094 CCDC62Q6P9F0 684 aa22.97■■□□□ 1.27
MSH5-210ENST00000463094 DHX37Q8IY37 1157 aaKnown RBP22.97■■□□□ 1.27
MSH5-210ENST00000463094 AFG1LQ8WV93 481 aa22.97■■□□□ 1.27
MSH5-210ENST00000463094 LRRC2Q9BYS8 371 aa22.97■■□□□ 1.27
MSH5-210ENST00000463094 TRPV6Q9H1D0 765 aa22.97■■□□□ 1.27
MSH5-210ENST00000463094 ALDH8A1Q9H2A2 487 aaPredicted RBP22.97■■□□□ 1.27
MSH5-210ENST00000463094 MTIF3Q9H2K0 278 aaKnown RBP22.97■■□□□ 1.27
MSH5-210ENST00000463094 RANBP2P49792 3224 aaKnown RBP22.97■■□□□ 1.27
MSH5-210ENST00000463094 B4GALT4O60513 344 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms