RNA–Protein interactions for RNA: ENST00000462817.5

LIMS1-211, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 4

Gene LIMS1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-211ENST00000462817 ANKRD33Q7Z3H0 272 aa17.98■□□□□ 0.47
LIMS1-211ENST00000462817 TRIM43Q96BQ3 446 aaPredicted RBP17.98■□□□□ 0.47
LIMS1-211ENST00000462817 MTMR8Q96EF0 704 aa17.98■□□□□ 0.47
LIMS1-211ENST00000462817 MAP3K14Q99558 947 aa17.98■□□□□ 0.47
LIMS1-211ENST00000462817 MYL10Q9BUA6 226 aa17.98■□□□□ 0.47
LIMS1-211ENST00000462817 SEC63Q9UGP8 760 aaKnown RBP17.98■□□□□ 0.47
LIMS1-211ENST00000462817 SLC12A7Q9Y666 1083 aa17.98■□□□□ 0.47
LIMS1-211ENST00000462817 RBM47A0AV96 593 aaKnown RBP17.97■□□□□ 0.47
LIMS1-211ENST00000462817 SH2B2O14492 632 aaPredicted RBP17.97■□□□□ 0.47
LIMS1-211ENST00000462817 CTAGE5O15320 804 aa17.97■□□□□ 0.47
LIMS1-211ENST00000462817 MYL3P08590 195 aa17.97■□□□□ 0.47
LIMS1-211ENST00000462817 CALM1P0DP23 149 aa17.97■□□□□ 0.47
LIMS1-211ENST00000462817 CALM2P0DP24 149 aa17.97■□□□□ 0.47
LIMS1-211ENST00000462817 CALM3P0DP25 149 aa17.97■□□□□ 0.47
LIMS1-211ENST00000462817 EIF2AK2P19525 551 aaKnown RBP17.97■□□□□ 0.47
LIMS1-211ENST00000462817 PTGS1P23219 599 aa17.97■□□□□ 0.47
LIMS1-211ENST00000462817 TMEM63BQ5T3F8 832 aa17.97■□□□□ 0.47
LIMS1-211ENST00000462817 SEPT14Q6ZU15 432 aa17.97■□□□□ 0.47
LIMS1-211ENST00000462817 SAMD3Q8N6K7 520 aa17.97■□□□□ 0.47
LIMS1-211ENST00000462817 RRP36Q96EU6 259 aaKnown RBP17.97■□□□□ 0.47
LIMS1-211ENST00000462817 NEK1Q96PY6 1258 aa17.97■□□□□ 0.47
LIMS1-211ENST00000462817 LZTS2Q9BRK4 669 aa17.97■□□□□ 0.47
LIMS1-211ENST00000462817 POLR3EQ9NVU0 708 aa17.97■□□□□ 0.47
LIMS1-211ENST00000462817 MAP3K20Q9NYL2 800 aaKnown RBP17.97■□□□□ 0.47
LIMS1-211ENST00000462817 LRRC37A2A6NM11 1700 aa17.97■□□□□ 0.47
LIMS1-211ENST00000462817 GCOM1H8Y6P7 765 aaPredicted RBP17.96■□□□□ 0.47
LIMS1-211ENST00000462817 KIAA0355O15063 1070 aa17.96■□□□□ 0.47
LIMS1-211ENST00000462817 PPP1R11O60927 126 aaPredicted RBP17.96■□□□□ 0.47
LIMS1-211ENST00000462817 POLR2MP0CAP2 368 aa17.96■□□□□ 0.47
LIMS1-211ENST00000462817 LIFRP42702 1097 aa17.96■□□□□ 0.47
LIMS1-211ENST00000462817 FAAP100Q0VG06 881 aa17.96■□□□□ 0.47
LIMS1-211ENST00000462817 KRT32Q14532 448 aa17.96■□□□□ 0.47
LIMS1-211ENST00000462817 LRRC2Q9BYS8 371 aa17.96■□□□□ 0.47
LIMS1-211ENST00000462817 COL20A1Q9P218 1284 aa17.96■□□□□ 0.47
LIMS1-211ENST00000462817 CYTH3O43739 400 aa17.95■□□□□ 0.46
LIMS1-211ENST00000462817 MYCLP12524 364 aaPredicted RBP17.95■□□□□ 0.46
LIMS1-211ENST00000462817 HOXA13P31271 388 aaPredicted RBP17.95■□□□□ 0.46
LIMS1-211ENST00000462817 CDK7P50613 346 aa17.95■□□□□ 0.46
LIMS1-211ENST00000462817 ITGA7Q13683 1181 aa17.95■□□□□ 0.46
LIMS1-211ENST00000462817 LRIT3Q3SXY7 679 aa17.95■□□□□ 0.46
LIMS1-211ENST00000462817 LRCH3Q96II8 777 aa17.95■□□□□ 0.46
LIMS1-211ENST00000462817 SEZ6LQ9BYH1 1024 aa17.95■□□□□ 0.46
LIMS1-211ENST00000462817 PXMP2Q9NR77 195 aa17.95■□□□□ 0.46
LIMS1-211ENST00000462817 BAZ2BQ9UIF8 2168 aaKnown RBP17.95■□□□□ 0.46
LIMS1-211ENST00000462817 EIF3JO75822 258 aaKnown RBP17.94■□□□□ 0.46
LIMS1-211ENST00000462817 NR3C2P08235 984 aa17.94■□□□□ 0.46
LIMS1-211ENST00000462817 RXRAP19793 462 aa17.94■□□□□ 0.46
LIMS1-211ENST00000462817 HSD17B4P51659 736 aa17.94■□□□□ 0.46
LIMS1-211ENST00000462817 FGD1P98174 961 aa17.94■□□□□ 0.46
LIMS1-211ENST00000462817 FCHSD1Q86WN1 690 aa17.94■□□□□ 0.46
LIMS1-211ENST00000462817 RAB11FIP4Q86YS3 637 aa17.94■□□□□ 0.46
LIMS1-211ENST00000462817 SPZ1Q9BXG8 430 aa17.94■□□□□ 0.46
LIMS1-211ENST00000462817 SOX1O00570 391 aaPredicted RBP17.93■□□□□ 0.46
LIMS1-211ENST00000462817 KPNA6O60684 536 aa17.93■□□□□ 0.46
LIMS1-211ENST00000462817 SMARCA1P28370 1054 aa17.93■□□□□ 0.46
LIMS1-211ENST00000462817 PSMC6P62333 389 aa17.93■□□□□ 0.46
LIMS1-211ENST00000462817 FPGSQ05932 587 aa17.93■□□□□ 0.46
LIMS1-211ENST00000462817 SLC35G1Q2M3R5 365 aa17.93■□□□□ 0.46
LIMS1-211ENST00000462817 DHX32Q7L7V1 743 aaKnown RBP17.93■□□□□ 0.46
LIMS1-211ENST00000462817 MICU3Q86XE3 530 aa17.93■□□□□ 0.46
LIMS1-211ENST00000462817 COPS5Q92905 334 aa17.93■□□□□ 0.46
LIMS1-211ENST00000462817 CUL5Q93034 780 aa17.93■□□□□ 0.46
LIMS1-211ENST00000462817 MTG1Q9BT17 334 aaPredicted RBP17.93■□□□□ 0.46
LIMS1-211ENST00000462817 MRVI1Q9Y6F6 885 aa17.93■□□□□ 0.46
LIMS1-211ENST00000462817 OPLAHO14841 1288 aa17.92■□□□□ 0.46
LIMS1-211ENST00000462817 TIMP1P01033 207 aa17.92■□□□□ 0.46
LIMS1-211ENST00000462817 GH1P01241 217 aa17.92■□□□□ 0.46
LIMS1-211ENST00000462817 HMGB1P09429 215 aaKnown RBP17.92■□□□□ 0.46
LIMS1-211ENST00000462817 ITGB8P26012 769 aa17.92■□□□□ 0.46
LIMS1-211ENST00000462817 CHMP4BP1P59074 171 aa17.92■□□□□ 0.46
LIMS1-211ENST00000462817 LY6KQ17RY6 165 aa17.92■□□□□ 0.46
LIMS1-211ENST00000462817 FAM47CQ5HY64 1035 aa17.92■□□□□ 0.46
LIMS1-211ENST00000462817 FAM126BQ8IXS8 530 aa17.92■□□□□ 0.46
LIMS1-211ENST00000462817 CCDC82Q8N4S0 544 aa17.92■□□□□ 0.46
LIMS1-211ENST00000462817 SMARCC2Q8TAQ2 1214 aa17.92■□□□□ 0.46
LIMS1-211ENST00000462817 NAP1L2Q9ULW6 460 aaPredicted RBP17.92■□□□□ 0.46
LIMS1-211ENST00000462817 REC8O95072 547 aa17.91■□□□□ 0.46
LIMS1-211ENST00000462817 ARIH2O95376 493 aa17.91■□□□□ 0.46
LIMS1-211ENST00000462817 PLEKHA8P1O95397 391 aa17.91■□□□□ 0.46
LIMS1-211ENST00000462817 CENPBP07199 599 aaPredicted RBP17.91■□□□□ 0.46
LIMS1-211ENST00000462817 CCND2P30279 289 aa17.91■□□□□ 0.46
LIMS1-211ENST00000462817 PURAQ00577 322 aaKnown RBP17.91■□□□□ 0.46
LIMS1-211ENST00000462817 GHRHRQ02643 423 aa17.91■□□□□ 0.46
LIMS1-211ENST00000462817 SHHQ15465 462 aa17.91■□□□□ 0.46
LIMS1-211ENST00000462817 SGMS1Q86VZ5 419 aa17.91■□□□□ 0.46
LIMS1-211ENST00000462817 CMTR1Q8N1G2 835 aaKnown RBP17.91■□□□□ 0.46
LIMS1-211ENST00000462817 TMEM199Q8N511 208 aa17.91■□□□□ 0.46
LIMS1-211ENST00000462817 SRBD1Q8N5C6 995 aaKnown RBP17.91■□□□□ 0.46
LIMS1-211ENST00000462817 FANCBQ8NB91 859 aa17.91■□□□□ 0.46
LIMS1-211ENST00000462817 TCEANC2Q96MN5 208 aa17.91■□□□□ 0.46
LIMS1-211ENST00000462817 PDCD2LQ9BRP1 358 aa17.91■□□□□ 0.46
LIMS1-211ENST00000462817 PPP1R12CQ9BZL4 782 aa17.91■□□□□ 0.46
LIMS1-211ENST00000462817 TBX21Q9UL17 535 aa17.91■□□□□ 0.46
LIMS1-211ENST00000462817 LTBP2Q14767 1821 aa17.91■□□□□ 0.46
LIMS1-211ENST00000462817 A6NJR5 290 aa17.9■□□□□ 0.46
LIMS1-211ENST00000462817 COL9A3Q14050 684 aaPredicted RBP17.9■□□□□ 0.46
LIMS1-211ENST00000462817 PGM5Q15124 567 aa17.9■□□□□ 0.46
LIMS1-211ENST00000462817 ADCK5Q3MIX3 580 aa17.9■□□□□ 0.46
LIMS1-211ENST00000462817 TSGA10IPQ3SY00 556 aa17.9■□□□□ 0.46
LIMS1-211ENST00000462817 MFSD5Q6N075 450 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms