RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 PTGISQ16647 500 aa13.79□□□□□ -0.2
PCCB-203ENST00000462542 DCAF4Q8WV16 495 aa13.79□□□□□ -0.2
PCCB-203ENST00000462542 GPATCH3Q96I76 525 aa13.79□□□□□ -0.2
PCCB-203ENST00000462542 TGS1Q96RS0 853 aaKnown RBP13.79□□□□□ -0.2
PCCB-203ENST00000462542 RANBP17Q9H2T7 1088 aaKnown RBP13.79□□□□□ -0.2
PCCB-203ENST00000462542 SUGCTQ9HAC7 445 aa13.79□□□□□ -0.2
PCCB-203ENST00000462542 SCN10AQ9Y5Y9 1956 aa13.79□□□□□ -0.2
PCCB-203ENST00000462542 PTPDC1A2A3K4 754 aa13.78□□□□□ -0.2
PCCB-203ENST00000462542 GJB5O95377 273 aa13.78□□□□□ -0.2
PCCB-203ENST00000462542 SELPP16109 830 aa13.78□□□□□ -0.2
PCCB-203ENST00000462542 CSPP1Q1MSJ5 1256 aa13.78□□□□□ -0.2
PCCB-203ENST00000462542 CNKSR3Q6P9H4 555 aa13.78□□□□□ -0.2
PCCB-203ENST00000462542 BTNL9Q6UXG8 535 aa13.78□□□□□ -0.2
PCCB-203ENST00000462542 SESTD1Q86VW0 696 aa13.78□□□□□ -0.2
PCCB-203ENST00000462542 DNERQ8NFT8 737 aa13.78□□□□□ -0.2
PCCB-203ENST00000462542 NAPBQ9H115 298 aa13.78□□□□□ -0.2
PCCB-203ENST00000462542 CTNNA3Q9UI47 895 aa13.78□□□□□ -0.2
PCCB-203ENST00000462542 LCHNA4D1U4 455 aa13.77□□□□□ -0.21
PCCB-203ENST00000462542 TSPY2A6NKD2 308 aa13.77□□□□□ -0.21
PCCB-203ENST00000462542 CXCL10P02778 98 aa13.77□□□□□ -0.21
PCCB-203ENST00000462542 TXNP10599 105 aaKnown RBP13.77□□□□□ -0.21
PCCB-203ENST00000462542 PPARAQ07869 468 aa13.77□□□□□ -0.21
PCCB-203ENST00000462542 IKBKEQ14164 716 aa13.77□□□□□ -0.21
PCCB-203ENST00000462542 RNF207Q6ZRF8 634 aa13.77□□□□□ -0.21
PCCB-203ENST00000462542 TET1Q8NFU7 2136 aa13.77□□□□□ -0.21
PCCB-203ENST00000462542 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.77□□□□□ -0.21
PCCB-203ENST00000462542 GDPD5Q8WTR4 605 aa13.77□□□□□ -0.21
PCCB-203ENST00000462542 CHMP4CQ96CF2 233 aa13.77□□□□□ -0.21
PCCB-203ENST00000462542 IL17RBQ9NRM6 502 aa13.77□□□□□ -0.21
PCCB-203ENST00000462542 TRIP12Q14669 1992 aaPredicted RBP13.76□□□□□ -0.21
PCCB-203ENST00000462542 M0R2C6 588 aa13.76□□□□□ -0.21
PCCB-203ENST00000462542 NFIBO00712 420 aa13.76□□□□□ -0.21
PCCB-203ENST00000462542 EDNRBP24530 442 aa13.76□□□□□ -0.21
PCCB-203ENST00000462542 CALML3P27482 149 aa13.76□□□□□ -0.21
PCCB-203ENST00000462542 SSTR3P32745 418 aaPredicted RBP13.76□□□□□ -0.21
PCCB-203ENST00000462542 NOVP48745 357 aa13.76□□□□□ -0.21
PCCB-203ENST00000462542 RBL2Q08999 1139 aa13.76□□□□□ -0.21
PCCB-203ENST00000462542 GPNMBQ14956 572 aa13.76□□□□□ -0.21
PCCB-203ENST00000462542 SPRED2Q7Z698 418 aa13.76□□□□□ -0.21
PCCB-203ENST00000462542 UIMC1Q96RL1 719 aa13.76□□□□□ -0.21
PCCB-203ENST00000462542 CRBNQ96SW2 442 aa13.76□□□□□ -0.21
PCCB-203ENST00000462542 MAF1Q9H063 256 aa13.76□□□□□ -0.21
PCCB-203ENST00000462542 LINC01553A4QN01 128 aa13.75□□□□□ -0.21
PCCB-203ENST00000462542 GRXCR2A6NFK2 248 aa13.75□□□□□ -0.21
PCCB-203ENST00000462542 SMARCA5O60264 1052 aaPredicted RBP13.75□□□□□ -0.21
PCCB-203ENST00000462542 KCNA5P22460 613 aa13.75□□□□□ -0.21
PCCB-203ENST00000462542 MRE11P49959 708 aa13.75□□□□□ -0.21
PCCB-203ENST00000462542 CCDC96Q2M329 555 aa13.75□□□□□ -0.21
PCCB-203ENST00000462542 SYDE2Q5VT97 1194 aa13.75□□□□□ -0.21
PCCB-203ENST00000462542 PTCRAQ6ISU1 281 aaPredicted RBP13.75□□□□□ -0.21
PCCB-203ENST00000462542 LRRC8DQ7L1W4 858 aa13.75□□□□□ -0.21
PCCB-203ENST00000462542 RGS22Q8NE09 1264 aa13.75□□□□□ -0.21
PCCB-203ENST00000462542 FAM50BQ9Y247 325 aa13.75□□□□□ -0.21
PCCB-203ENST00000462542 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.75□□□□□ -0.21
PCCB-203ENST00000462542 INSL6Q9Y581 213 aa13.75□□□□□ -0.21
PCCB-203ENST00000462542 BRWD1Q9NSI6 2320 aa13.75□□□□□ -0.21
PCCB-203ENST00000462542 LCTP09848 1927 aa13.74□□□□□ -0.21
PCCB-203ENST00000462542 TANC1Q9C0D5 1861 aa13.74□□□□□ -0.21
PCCB-203ENST00000462542 POTEB3A0JP26 581 aa13.74□□□□□ -0.21
PCCB-203ENST00000462542 CASTP20810 708 aaKnown RBP13.74□□□□□ -0.21
PCCB-203ENST00000462542 SLC16A2P36021 539 aa13.74□□□□□ -0.21
PCCB-203ENST00000462542 CHMP4BP1P59074 171 aa13.74□□□□□ -0.21
PCCB-203ENST00000462542 RPS6P62753 249 aaKnown RBP13.74□□□□□ -0.21
PCCB-203ENST00000462542 DEFB103AP81534 67 aa13.74□□□□□ -0.21
PCCB-203ENST00000462542 PTPROQ16827 1216 aa13.74□□□□□ -0.21
PCCB-203ENST00000462542 TTBK2Q6IQ55 1244 aa13.74□□□□□ -0.21
PCCB-203ENST00000462542 GDF6Q6KF10 455 aaPredicted RBP13.74□□□□□ -0.21
PCCB-203ENST00000462542 POTEBQ6S5H4 581 aa13.74□□□□□ -0.21
PCCB-203ENST00000462542 PPP1R13LQ8WUF5 828 aa13.74□□□□□ -0.21
PCCB-203ENST00000462542 CLEC4DQ8WXI8 215 aa13.74□□□□□ -0.21
PCCB-203ENST00000462542 COPS5Q92905 334 aa13.74□□□□□ -0.21
PCCB-203ENST00000462542 CTAGE1Q96RT6 745 aa13.74□□□□□ -0.21
PCCB-203ENST00000462542 MTUS1Q9ULD2 1270 aa13.74□□□□□ -0.21
PCCB-203ENST00000462542 DCXO43602 365 aa13.73□□□□□ -0.21
PCCB-203ENST00000462542 RANBP6O60518 1105 aaKnown RBP13.73□□□□□ -0.21
PCCB-203ENST00000462542 NMT2O60551 498 aa13.73□□□□□ -0.21
PCCB-203ENST00000462542 NBNO60934 754 aa13.73□□□□□ -0.21
PCCB-203ENST00000462542 GH1P01241 217 aa13.73□□□□□ -0.21
PCCB-203ENST00000462542 CKBP12277 381 aa13.73□□□□□ -0.21
PCCB-203ENST00000462542 HNRNPUQ00839 825 aaKnown RBP eCLIP13.73□□□□□ -0.21
PCCB-203ENST00000462542 CCDC62Q6P9F0 684 aa13.73□□□□□ -0.21
PCCB-203ENST00000462542 TMCO2Q7Z6W1 182 aaPredicted RBP13.73□□□□□ -0.21
PCCB-203ENST00000462542 FBXO22Q8NEZ5 403 aa13.73□□□□□ -0.21
PCCB-203ENST00000462542 NEK9Q8TD19 979 aa13.73□□□□□ -0.21
PCCB-203ENST00000462542 AFG1LQ8WV93 481 aa13.73□□□□□ -0.21
PCCB-203ENST00000462542 MRPL38Q96DV4 380 aaKnown RBP13.73□□□□□ -0.21
PCCB-203ENST00000462542 SAMD11Q96NU1 681 aa13.73□□□□□ -0.21
PCCB-203ENST00000462542 UPF3BQ9BZI7 483 aaKnown RBP13.73□□□□□ -0.21
PCCB-203ENST00000462542 PRKAG3Q9UGI9 489 aa13.73□□□□□ -0.21
PCCB-203ENST00000462542 GTF2IRD1Q9UHL9 959 aa13.73□□□□□ -0.21
PCCB-203ENST00000462542 ANAPC4Q9UJX5 808 aa13.73□□□□□ -0.21
PCCB-203ENST00000462542 MTMR7Q9Y216 660 aa13.73□□□□□ -0.21
PCCB-203ENST00000462542 PTPRSQ13332 1948 aa13.72□□□□□ -0.21
PCCB-203ENST00000462542 WDR19Q8NEZ3 1342 aa13.72□□□□□ -0.21
PCCB-203ENST00000462542 WDFY4Q6ZS81 3184 aa13.72□□□□□ -0.21
PCCB-203ENST00000462542 ORC4O43929 436 aa13.72□□□□□ -0.21
PCCB-203ENST00000462542 TOP1P11387 765 aaKnown RBP13.72□□□□□ -0.21
PCCB-203ENST00000462542 IL9P15248 144 aa13.72□□□□□ -0.21
PCCB-203ENST00000462542 NHLH1Q02575 133 aa13.72□□□□□ -0.21
PCCB-203ENST00000462542 PTK7Q13308 1070 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms