RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 SAMM50Q9Y512 469 aa5.8□□□□□ -1.48
CSMD3-205ENST00000462254 PCDHB5Q9Y5E4 795 aa5.8□□□□□ -1.48
CSMD3-205ENST00000462254 HMX2A2RU54 273 aa5.79□□□□□ -1.48
CSMD3-205ENST00000462254 PRAMEF22A3QJZ6 481 aa5.79□□□□□ -1.48
CSMD3-205ENST00000462254 TMPRSS2O15393 492 aa5.79□□□□□ -1.48
CSMD3-205ENST00000462254 BCAR3O75815 825 aa5.79□□□□□ -1.48
CSMD3-205ENST00000462254 HCLS1P14317 486 aaPredicted RBP5.79□□□□□ -1.48
CSMD3-205ENST00000462254 EIF4A3P38919 411 aaKnown RBP5.79□□□□□ -1.48
CSMD3-205ENST00000462254 RRP1P56182 461 aaKnown RBP5.79□□□□□ -1.48
CSMD3-205ENST00000462254 RBM6P78332 1123 aaKnown RBP5.79□□□□□ -1.48
CSMD3-205ENST00000462254 C4orf46Q504U0 113 aa5.79□□□□□ -1.48
CSMD3-205ENST00000462254 ZNF790Q6PG37 636 aa5.79□□□□□ -1.48
CSMD3-205ENST00000462254 BEND4Q6ZU67 534 aa5.79□□□□□ -1.48
CSMD3-205ENST00000462254 RELL1Q8IUW5 271 aa5.79□□□□□ -1.48
CSMD3-205ENST00000462254 TRIM42Q8IWZ5 723 aa5.79□□□□□ -1.48
CSMD3-205ENST00000462254 CPLX3Q8WVH0 158 aa5.79□□□□□ -1.48
CSMD3-205ENST00000462254 PIGBQ92521 554 aa5.79□□□□□ -1.48
CSMD3-205ENST00000462254 KCNF1Q9H3M0 494 aa5.79□□□□□ -1.48
CSMD3-205ENST00000462254 KCNQ5Q9NR82 932 aa5.79□□□□□ -1.48
CSMD3-205ENST00000462254 TMOD3Q9NYL9 352 aa5.79□□□□□ -1.48
CSMD3-205ENST00000462254 CRIM1Q9NZV1 1036 aa5.79□□□□□ -1.48
CSMD3-205ENST00000462254 CYP8B1Q9UNU6 501 aa5.79□□□□□ -1.48
CSMD3-205ENST00000462254 RAXQ9Y2V3 346 aa5.79□□□□□ -1.48
CSMD3-205ENST00000462254 MYH3P11055 1940 aa5.79□□□□□ -1.48
CSMD3-205ENST00000462254 CCDC85CA6NKD9 419 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 TCERG1O14776 1098 aaKnown RBP5.78□□□□□ -1.48
CSMD3-205ENST00000462254 KCNQ2O43526 872 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 PLIN1O60240 522 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 ADAM23O75077 832 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 PPFIA4O75335 1185 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 TRIM37O94972 964 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 SLFN14P0C7P3 912 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 TFE3P19532 575 aaPredicted RBP5.78□□□□□ -1.48
CSMD3-205ENST00000462254 CDK8P49336 464 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 LIG3P49916 1009 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 USP11P51784 963 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 IRX6P78412 446 aaPredicted RBP5.78□□□□□ -1.48
CSMD3-205ENST00000462254 SQSTM1Q13501 440 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 RASGRF1Q13972 1273 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 UBE4AQ14139 1066 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 LRRC14Q15048 493 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 ALDH1L2Q3SY69 923 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 ZC3H12AQ5D1E8 599 aaKnown RBP5.78□□□□□ -1.48
CSMD3-205ENST00000462254 PRSS36Q5K4E3 855 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.78□□□□□ -1.48
CSMD3-205ENST00000462254 AGMOQ6ZNB7 445 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 PTF1AQ7RTS3 328 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 SSH1Q8WYL5 1049 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 GAL3ST3Q96A11 431 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 SYTL4Q96C24 671 aaPredicted RBP5.78□□□□□ -1.48
CSMD3-205ENST00000462254 EVI5LQ96CN4 794 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 ZNF496Q96IT1 587 aaPredicted RBP5.78□□□□□ -1.48
CSMD3-205ENST00000462254 TMEM74Q96NL1 305 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 FANCD2OSQ96PS1 177 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 GSX1Q9H4S2 264 aaPredicted RBP5.78□□□□□ -1.48
CSMD3-205ENST00000462254 C7orf69Q9H7B7 122 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 DISC1Q9NRI5 854 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 STOML1Q9UBI4 398 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 ASAP1Q9ULH1 1129 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 TNNQ9UQP3 1299 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 SCN7AQ01118 1682 aa5.78□□□□□ -1.48
CSMD3-205ENST00000462254 SYNGAP1Q96PV0 1343 aa5.77□□□□□ -1.49
CSMD3-205ENST00000462254 QSER1Q2KHR3 1735 aa5.77□□□□□ -1.49
CSMD3-205ENST00000462254 NFICP08651 508 aa5.77□□□□□ -1.49
CSMD3-205ENST00000462254 RLBP1P12271 317 aa5.77□□□□□ -1.49
CSMD3-205ENST00000462254 MAP4P27816 1152 aaKnown RBP5.77□□□□□ -1.49
CSMD3-205ENST00000462254 RXRBP28702 533 aa5.77□□□□□ -1.49
CSMD3-205ENST00000462254 ASPAP45381 313 aa5.77□□□□□ -1.49
CSMD3-205ENST00000462254 ID3Q02535 119 aa5.77□□□□□ -1.49
CSMD3-205ENST00000462254 SEPT6Q14141 434 aa5.77□□□□□ -1.49
CSMD3-205ENST00000462254 INPP5AQ14642 412 aa5.77□□□□□ -1.49
CSMD3-205ENST00000462254 C2orf27AQ580R0 203 aa5.77□□□□□ -1.49
CSMD3-205ENST00000462254 SPTY2D1Q68D10 685 aaPredicted RBP5.77□□□□□ -1.49
CSMD3-205ENST00000462254 KRT27Q7Z3Y8 459 aa5.77□□□□□ -1.49
CSMD3-205ENST00000462254 CLEC10AQ8IUN9 316 aa5.77□□□□□ -1.49
CSMD3-205ENST00000462254 TTC5Q8N0Z6 440 aa5.77□□□□□ -1.49
CSMD3-205ENST00000462254 SYNPOQ8N3V7 929 aa5.77□□□□□ -1.49
CSMD3-205ENST00000462254 PHC3Q8NDX5 983 aa5.77□□□□□ -1.49
CSMD3-205ENST00000462254 ZNF296Q8WUU4 475 aaPredicted RBP5.77□□□□□ -1.49
CSMD3-205ENST00000462254 ANAPC16Q96DE5 110 aa5.77□□□□□ -1.49
CSMD3-205ENST00000462254 FAM83CQ9BQN1 747 aa5.77□□□□□ -1.49
CSMD3-205ENST00000462254 SRRTQ9BXP5 876 aaKnown RBP5.77□□□□□ -1.49
CSMD3-205ENST00000462254 ATG3Q9NT62 314 aa5.77□□□□□ -1.49
CSMD3-205ENST00000462254 SMC4Q9NTJ3 1288 aa5.77□□□□□ -1.49
CSMD3-205ENST00000462254 PCDHA4Q9UN74 947 aa5.77□□□□□ -1.49
CSMD3-205ENST00000462254 CSADQ9Y600 493 aa5.77□□□□□ -1.49
CSMD3-205ENST00000462254 SOS1Q07889 1333 aaPredicted RBP5.76□□□□□ -1.49
CSMD3-205ENST00000462254 DCDC2CA8MYV0 355 aa5.76□□□□□ -1.49
CSMD3-205ENST00000462254 PDPK1O15530 556 aa5.76□□□□□ -1.49
CSMD3-205ENST00000462254 DYNC1LI2O43237 492 aaPredicted RBP5.76□□□□□ -1.49
CSMD3-205ENST00000462254 HOXB7P09629 217 aa5.76□□□□□ -1.49
CSMD3-205ENST00000462254 FSTP19883 344 aa5.76□□□□□ -1.49
CSMD3-205ENST00000462254 EIF2S2P20042 333 aaKnown RBP5.76□□□□□ -1.49
CSMD3-205ENST00000462254 RAB6AP20340 208 aa5.76□□□□□ -1.49
CSMD3-205ENST00000462254 GBP2P32456 591 aaPredicted RBP5.76□□□□□ -1.49
CSMD3-205ENST00000462254 RPS26P62854 115 aaKnown RBP5.76□□□□□ -1.49
CSMD3-205ENST00000462254 TTLL4Q14679 1199 aa5.76□□□□□ -1.49
CSMD3-205ENST00000462254 TCEA2Q15560 299 aa5.76□□□□□ -1.49
CSMD3-205ENST00000462254 DDR2Q16832 855 aa5.76□□□□□ -1.49
CSMD3-205ENST00000462254 TKFCQ3LXA3 575 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms