RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 TTC21BQ7Z4L5 1316 aa6.79□□□□□ -1.32
COPS3-204ENST00000462236 LTBP3Q9NS15 1303 aa6.79□□□□□ -1.32
COPS3-204ENST00000462236 F13BP05160 661 aa6.79□□□□□ -1.32
COPS3-204ENST00000462236 POLR2BP30876 1174 aaKnown RBP6.79□□□□□ -1.32
COPS3-204ENST00000462236 ZNF143P52747 638 aaPredicted RBP6.79□□□□□ -1.32
COPS3-204ENST00000462236 SLC7A5Q01650 507 aa6.79□□□□□ -1.32
COPS3-204ENST00000462236 ZYXQ15942 572 aaKnown RBP6.79□□□□□ -1.32
COPS3-204ENST00000462236 NFE2L2Q16236 605 aa6.79□□□□□ -1.32
COPS3-204ENST00000462236 DDR2Q16832 855 aa6.79□□□□□ -1.32
COPS3-204ENST00000462236 ANKRD39Q53RE8 183 aa6.79□□□□□ -1.32
COPS3-204ENST00000462236 SFRP5Q5T4F7 317 aa6.79□□□□□ -1.32
COPS3-204ENST00000462236 TMEM192Q8IY95 271 aa6.79□□□□□ -1.32
COPS3-204ENST00000462236 KCNH5Q8NCM2 988 aa6.79□□□□□ -1.32
COPS3-204ENST00000462236 PIWIL2Q8TC59 973 aaKnown RBP6.79□□□□□ -1.32
COPS3-204ENST00000462236 CCDC113Q9H0I3 377 aa6.79□□□□□ -1.32
COPS3-204ENST00000462236 PRR13Q9NZ81 148 aa6.79□□□□□ -1.32
COPS3-204ENST00000462236 TPX2Q9ULW0 747 aaKnown RBP6.79□□□□□ -1.32
COPS3-204ENST00000462236 C4BP0C0L5 1744 aa6.79□□□□□ -1.32
COPS3-204ENST00000462236 TTC21AQ8NDW8 1320 aa6.78□□□□□ -1.32
COPS3-204ENST00000462236 LEFTY1O75610 366 aa6.78□□□□□ -1.32
COPS3-204ENST00000462236 ZNF865P0CJ78 1059 aaPredicted RBP6.78□□□□□ -1.32
COPS3-204ENST00000462236 NAT2P11245 290 aa6.78□□□□□ -1.32
COPS3-204ENST00000462236 IL2RBP14784 551 aa6.78□□□□□ -1.32
COPS3-204ENST00000462236 NBPF12Q5TAG4 269 aaPredicted RBP6.78□□□□□ -1.32
COPS3-204ENST00000462236 CDH24Q86UP0 819 aa6.78□□□□□ -1.32
COPS3-204ENST00000462236 COL23A1Q86Y22 540 aaPredicted RBP6.78□□□□□ -1.32
COPS3-204ENST00000462236 JMYQ8N9B5 988 aa6.78□□□□□ -1.32
COPS3-204ENST00000462236 RIN3Q8TB24 985 aa6.78□□□□□ -1.32
COPS3-204ENST00000462236 ZNF669Q96BR6 464 aaPredicted RBP6.78□□□□□ -1.32
COPS3-204ENST00000462236 OSBPL1AQ9BXW6 950 aa6.78□□□□□ -1.32
COPS3-204ENST00000462236 OSBPL2Q9H1P3 480 aa6.78□□□□□ -1.32
COPS3-204ENST00000462236 KCNH3Q9ULD8 1083 aa6.78□□□□□ -1.32
COPS3-204ENST00000462236 MSRB2Q9Y3D2 182 aa6.78□□□□□ -1.32
COPS3-204ENST00000462236 CD2APQ9Y5K6 639 aa6.78□□□□□ -1.32
COPS3-204ENST00000462236 CENPJQ9HC77 1338 aaPredicted RBP6.77□□□□□ -1.32
COPS3-204ENST00000462236 MYH14Q7Z406 1995 aaKnown RBP6.77□□□□□ -1.33
COPS3-204ENST00000462236 GNPTABQ3T906 1256 aa6.77□□□□□ -1.33
COPS3-204ENST00000462236 LARP1BQ659C4 914 aaKnown RBP6.77□□□□□ -1.33
COPS3-204ENST00000462236 VHLLQ6RSH7 139 aa6.77□□□□□ -1.33
COPS3-204ENST00000462236 ZNF765Q7L2R6 523 aa6.77□□□□□ -1.33
COPS3-204ENST00000462236 DPH6Q7L8W6 267 aa6.77□□□□□ -1.33
COPS3-204ENST00000462236 FBXL6Q8N531 539 aa6.77□□□□□ -1.33
COPS3-204ENST00000462236 SHKBP1Q8TBC3 707 aa6.77□□□□□ -1.33
COPS3-204ENST00000462236 LNPKQ9C0E8 428 aa6.77□□□□□ -1.33
COPS3-204ENST00000462236 EPN3Q9H201 632 aa6.77□□□□□ -1.33
COPS3-204ENST00000462236 ANKRD36BQ8N2N9 1353 aa6.77□□□□□ -1.33
COPS3-204ENST00000462236 RAB3GAP2Q9H2M9 1393 aa6.77□□□□□ -1.33
COPS3-204ENST00000462236 CD163L1Q9NR16 1453 aa6.77□□□□□ -1.33
COPS3-204ENST00000462236 TNRC6CQ9HCJ0 1690 aaKnown RBP6.77□□□□□ -1.33
COPS3-204ENST00000462236 DICER1Q9UPY3 1922 aaKnown RBP6.76□□□□□ -1.33
COPS3-204ENST00000462236 FAM170BA6NMN3 283 aa6.76□□□□□ -1.33
COPS3-204ENST00000462236 GNAT3A8MTJ3 354 aa6.76□□□□□ -1.33
COPS3-204ENST00000462236 WDR64B1ANS9 1081 aa6.76□□□□□ -1.33
COPS3-204ENST00000462236 ZDHHC13Q8IUH4 622 aa6.76□□□□□ -1.33
COPS3-204ENST00000462236 FAM178BQ8IXR5 827 aa6.76□□□□□ -1.33
COPS3-204ENST00000462236 HEXIM2Q96MH2 286 aaKnown RBP6.76□□□□□ -1.33
COPS3-204ENST00000462236 TFCP2L1Q9NZI6 479 aa6.76□□□□□ -1.33
COPS3-204ENST00000462236 LEMD3Q9Y2U8 911 aa6.76□□□□□ -1.33
COPS3-204ENST00000462236 PRELPP51888 382 aa6.75□□□□□ -1.33
COPS3-204ENST00000462236 EEPD1Q7L9B9 569 aa6.75□□□□□ -1.33
COPS3-204ENST00000462236 NOP9Q86U38 636 aaKnown RBP6.75□□□□□ -1.33
COPS3-204ENST00000462236 CELF2-AS1Q8N7Q2 184 aa6.75□□□□□ -1.33
COPS3-204ENST00000462236 ST13P5Q8NFI4 369 aaPredicted RBP6.75□□□□□ -1.33
COPS3-204ENST00000462236 ENOX1Q8TC92 643 aaKnown RBP6.75□□□□□ -1.33
COPS3-204ENST00000462236 KLHL6Q8WZ60 621 aa6.75□□□□□ -1.33
COPS3-204ENST00000462236 PIM2Q9P1W9 311 aa6.75□□□□□ -1.33
COPS3-204ENST00000462236 ZNF831Q5JPB2 1677 aa6.74□□□□□ -1.33
COPS3-204ENST00000462236 SBNO2Q9Y2G9 1366 aa6.74□□□□□ -1.33
COPS3-204ENST00000462236 A0A087WZG4 1122 aa6.74□□□□□ -1.33
COPS3-204ENST00000462236 K7ELQ4 463 aaPredicted RBP6.74□□□□□ -1.33
COPS3-204ENST00000462236 DDAH1O94760 285 aa6.74□□□□□ -1.33
COPS3-204ENST00000462236 TOMM70O94826 608 aa6.74□□□□□ -1.33
COPS3-204ENST00000462236 GJB6O95452 261 aa6.74□□□□□ -1.33
COPS3-204ENST00000462236 OXCT1P55809 520 aa6.74□□□□□ -1.33
COPS3-204ENST00000462236 AUHQ13825 339 aaKnown RBP6.74□□□□□ -1.33
COPS3-204ENST00000462236 RASGRF1Q13972 1273 aa6.74□□□□□ -1.33
COPS3-204ENST00000462236 TCEAL1Q15170 157 aa6.74□□□□□ -1.33
COPS3-204ENST00000462236 NBPF9Q3BBW0 867 aa6.74□□□□□ -1.33
COPS3-204ENST00000462236 CCDC144BQ3MJ40 725 aa6.74□□□□□ -1.33
COPS3-204ENST00000462236 KIAA1211LQ6NV74 962 aa6.74□□□□□ -1.33
COPS3-204ENST00000462236 C6orf15Q6UXA7 325 aaPredicted RBP6.74□□□□□ -1.33
COPS3-204ENST00000462236 CCDC144CPQ8IYA2 1237 aa6.74□□□□□ -1.33
COPS3-204ENST00000462236 C7orf61Q8IZ16 206 aa6.74□□□□□ -1.33
COPS3-204ENST00000462236 MFSD4AQ8N468 514 aa6.74□□□□□ -1.33
COPS3-204ENST00000462236 MKRN2Q9H000 416 aaKnown RBP6.74□□□□□ -1.33
COPS3-204ENST00000462236 SNX11Q9Y5W9 270 aa6.74□□□□□ -1.33
COPS3-204ENST00000462236 CAPN6Q9Y6Q1 641 aa6.74□□□□□ -1.33
COPS3-204ENST00000462236 C10orf71Q711Q0 1435 aa6.74□□□□□ -1.33
COPS3-204ENST00000462236 C4AP0C0L4 1744 aa6.73□□□□□ -1.33
COPS3-204ENST00000462236 COL5A3P25940 1745 aaPredicted RBP6.73□□□□□ -1.33
COPS3-204ENST00000462236 MEGF6O75095 1541 aa6.73□□□□□ -1.33
COPS3-204ENST00000462236 ANKRD34BA5PLL1 514 aa6.73□□□□□ -1.33
COPS3-204ENST00000462236 PRR19A6NJB7 356 aa6.73□□□□□ -1.33
COPS3-204ENST00000462236 FOSL1P15407 271 aa6.73□□□□□ -1.33
COPS3-204ENST00000462236 CLCN7P51798 805 aa6.73□□□□□ -1.33
COPS3-204ENST00000462236 INTS5Q6P9B9 1019 aaKnown RBP6.73□□□□□ -1.33
COPS3-204ENST00000462236 ARHGAP27Q6ZUM4 889 aa6.73□□□□□ -1.33
COPS3-204ENST00000462236 THAP5Q7Z6K1 395 aa6.73□□□□□ -1.33
COPS3-204ENST00000462236 PPFIBP1Q86W92 1011 aa6.73□□□□□ -1.33
COPS3-204ENST00000462236 AMIGO3Q86WK7 504 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms