RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.28□□□□□ -0.76
LDB1-203ENST00000461873 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.28□□□□□ -0.76
LDB1-203ENST00000461873 GCOM1H8Y6P7 765 aaPredicted RBP10.28□□□□□ -0.76
LDB1-203ENST00000461873 ZBTB5O15062 677 aa10.28□□□□□ -0.76
LDB1-203ENST00000461873 SGSM2O43147 1006 aa10.28□□□□□ -0.76
LDB1-203ENST00000461873 EIF3JO75822 258 aaKnown RBP10.28□□□□□ -0.76
LDB1-203ENST00000461873 GH1P01241 217 aa10.28□□□□□ -0.76
LDB1-203ENST00000461873 CYP21A2P08686 494 aa10.28□□□□□ -0.76
LDB1-203ENST00000461873 POLR2MP0CAP2 368 aa10.28□□□□□ -0.76
LDB1-203ENST00000461873 CALM1P0DP23 149 aa10.28□□□□□ -0.76
LDB1-203ENST00000461873 CALM2P0DP24 149 aa10.28□□□□□ -0.76
LDB1-203ENST00000461873 CALM3P0DP25 149 aa10.28□□□□□ -0.76
LDB1-203ENST00000461873 MYCLP12524 364 aaPredicted RBP10.28□□□□□ -0.76
LDB1-203ENST00000461873 CASTP20810 708 aaKnown RBP10.28□□□□□ -0.76
LDB1-203ENST00000461873 MCM5P33992 734 aa10.28□□□□□ -0.76
LDB1-203ENST00000461873 GNAQP50148 359 aa10.28□□□□□ -0.76
LDB1-203ENST00000461873 SMAD3P84022 425 aaKnown RBP10.28□□□□□ -0.76
LDB1-203ENST00000461873 FGD1P98174 961 aa10.28□□□□□ -0.76
LDB1-203ENST00000461873 PTH1RQ03431 593 aa10.28□□□□□ -0.76
LDB1-203ENST00000461873 KCNV1Q6PIU1 500 aa10.28□□□□□ -0.76
LDB1-203ENST00000461873 Q7L0L9 218 aa10.28□□□□□ -0.76
LDB1-203ENST00000461873 CHST3Q7LGC8 479 aa10.28□□□□□ -0.76
LDB1-203ENST00000461873 SAMD3Q8N6K7 520 aa10.28□□□□□ -0.76
LDB1-203ENST00000461873 CCDC155Q8N6L0 562 aa10.28□□□□□ -0.76
LDB1-203ENST00000461873 JMJD4Q9H9V9 463 aa10.28□□□□□ -0.76
LDB1-203ENST00000461873 MRVI1Q9Y6F6 885 aa10.28□□□□□ -0.76
LDB1-203ENST00000461873 RANBP2P49792 3224 aaKnown RBP10.28□□□□□ -0.76
LDB1-203ENST00000461873 ADCY6O43306 1168 aa10.27□□□□□ -0.77
LDB1-203ENST00000461873 FGBP02675 491 aa10.27□□□□□ -0.77
LDB1-203ENST00000461873 ACTN1P12814 892 aa10.27□□□□□ -0.77
LDB1-203ENST00000461873 EIF2AK2P19525 551 aaKnown RBP10.27□□□□□ -0.77
LDB1-203ENST00000461873 CDK7P50613 346 aa10.27□□□□□ -0.77
LDB1-203ENST00000461873 PSMC6P62333 389 aa10.27□□□□□ -0.77
LDB1-203ENST00000461873 NKX3-2P78367 333 aa10.27□□□□□ -0.77
LDB1-203ENST00000461873 IRX5P78411 483 aaPredicted RBP10.27□□□□□ -0.77
LDB1-203ENST00000461873 C9orf50Q5SZB4 431 aa10.27□□□□□ -0.77
LDB1-203ENST00000461873 FAM109BQ6ICB4 259 aaPredicted RBP10.27□□□□□ -0.77
LDB1-203ENST00000461873 CYB5R4Q7L1T6 521 aa10.27□□□□□ -0.77
LDB1-203ENST00000461873 FAM126BQ8IXS8 530 aa10.27□□□□□ -0.77
LDB1-203ENST00000461873 SYTL5Q8TDW5 730 aaPredicted RBP10.27□□□□□ -0.77
LDB1-203ENST00000461873 PIBF1Q8WXW3 757 aa10.27□□□□□ -0.77
LDB1-203ENST00000461873 MAP4K1Q92918 833 aa10.27□□□□□ -0.77
LDB1-203ENST00000461873 RRP36Q96EU6 259 aaKnown RBP10.27□□□□□ -0.77
LDB1-203ENST00000461873 TAAR1Q96RJ0 339 aa10.27□□□□□ -0.77
LDB1-203ENST00000461873 LZTS2Q9BRK4 669 aa10.27□□□□□ -0.77
LDB1-203ENST00000461873 KATNAL1Q9BW62 490 aa10.27□□□□□ -0.77
LDB1-203ENST00000461873 MSRAQ9UJ68 235 aa10.27□□□□□ -0.77
LDB1-203ENST00000461873 STXBP5LQ9Y2K9 1186 aa10.27□□□□□ -0.77
LDB1-203ENST00000461873 RBM8AQ9Y5S9 174 aaKnown RBP10.27□□□□□ -0.77
LDB1-203ENST00000461873 DDX49Q9Y6V7 483 aaKnown RBP10.27□□□□□ -0.77
LDB1-203ENST00000461873 LTBP2Q14767 1821 aa10.27□□□□□ -0.77
LDB1-203ENST00000461873 PNMA6FA0A0J9YX94 578 aa10.26□□□□□ -0.77
LDB1-203ENST00000461873 RBM47A0AV96 593 aaKnown RBP10.26□□□□□ -0.77
LDB1-203ENST00000461873 ZBBXA8MT70 800 aa10.26□□□□□ -0.77
LDB1-203ENST00000461873 CCND2P30279 289 aa10.26□□□□□ -0.77
LDB1-203ENST00000461873 CYP2C18P33260 490 aa10.26□□□□□ -0.77
LDB1-203ENST00000461873 BFSP2Q13515 415 aa10.26□□□□□ -0.77
LDB1-203ENST00000461873 GRM4Q14833 912 aa10.26□□□□□ -0.77
LDB1-203ENST00000461873 SEC23AQ15436 765 aa10.26□□□□□ -0.77
LDB1-203ENST00000461873 DGKDQ16760 1214 aa10.26□□□□□ -0.77
LDB1-203ENST00000461873 GNPTABQ3T906 1256 aa10.26□□□□□ -0.77
LDB1-203ENST00000461873 FCHSD1Q86WN1 690 aa10.26□□□□□ -0.77
LDB1-203ENST00000461873 DHX37Q8IY37 1157 aaKnown RBP10.26□□□□□ -0.77
LDB1-203ENST00000461873 STAG2Q8N3U4 1231 aa10.26□□□□□ -0.77
LDB1-203ENST00000461873 SMARCC2Q8TAQ2 1214 aa10.26□□□□□ -0.77
LDB1-203ENST00000461873 CCDC136Q96JN2 1154 aa10.26□□□□□ -0.77
LDB1-203ENST00000461873 TMEM87BQ96K49 555 aa10.26□□□□□ -0.77
LDB1-203ENST00000461873 MTA3Q9BTC8 594 aa10.26□□□□□ -0.77
LDB1-203ENST00000461873 PXMP2Q9NR77 195 aa10.26□□□□□ -0.77
LDB1-203ENST00000461873 MTMR10Q9NXD2 777 aa10.26□□□□□ -0.77
LDB1-203ENST00000461873 MAD2L2Q9UI95 211 aa10.26□□□□□ -0.77
LDB1-203ENST00000461873 TBX21Q9UL17 535 aa10.26□□□□□ -0.77
LDB1-203ENST00000461873 SLC12A7Q9Y666 1083 aa10.26□□□□□ -0.77
LDB1-203ENST00000461873 SZT2Q5T011 3432 aa10.26□□□□□ -0.77
LDB1-203ENST00000461873 PALM3A6NDB9 673 aaPredicted RBP10.25□□□□□ -0.77
LDB1-203ENST00000461873 NOP56O00567 594 aaKnown RBP10.25□□□□□ -0.77
LDB1-203ENST00000461873 PRC1O43663 620 aa10.25□□□□□ -0.77
LDB1-203ENST00000461873 B4GALT4O60513 344 aa10.25□□□□□ -0.77
LDB1-203ENST00000461873 DDAH1O94760 285 aa10.25□□□□□ -0.77
LDB1-203ENST00000461873 NR3C2P08235 984 aa10.25□□□□□ -0.77
LDB1-203ENST00000461873 PFKMP08237 780 aa10.25□□□□□ -0.77
LDB1-203ENST00000461873 CSF2RAP15509 400 aa10.25□□□□□ -0.77
LDB1-203ENST00000461873 EDNRBP24530 442 aa10.25□□□□□ -0.77
LDB1-203ENST00000461873 CCL23P55773 120 aa10.25□□□□□ -0.77
LDB1-203ENST00000461873 PURAQ00577 322 aaKnown RBP10.25□□□□□ -0.77
LDB1-203ENST00000461873 PTPN11Q06124 597 aaPredicted RBP10.25□□□□□ -0.77
LDB1-203ENST00000461873 LAMC2Q13753 1193 aa10.25□□□□□ -0.77
LDB1-203ENST00000461873 LY6KQ17RY6 165 aa10.25□□□□□ -0.77
LDB1-203ENST00000461873 NFRKBQ6P4R8 1299 aa10.25□□□□□ -0.77
LDB1-203ENST00000461873 C7orf31Q8N865 590 aa10.25□□□□□ -0.77
LDB1-203ENST00000461873 PIGSQ96S52 555 aa10.25□□□□□ -0.77
LDB1-203ENST00000461873 FTOQ9C0B1 505 aaKnown RBP eCLIP10.25□□□□□ -0.77
LDB1-203ENST00000461873 TRPV6Q9H1D0 765 aa10.25□□□□□ -0.77
LDB1-203ENST00000461873 ALDH8A1Q9H2A2 487 aaPredicted RBP10.25□□□□□ -0.77
LDB1-203ENST00000461873 MLXIPQ9HAP2 919 aa10.25□□□□□ -0.77
LDB1-203ENST00000461873 IL23AQ9NPF7 189 aa10.25□□□□□ -0.77
LDB1-203ENST00000461873 ASTN1O14525 1302 aa10.25□□□□□ -0.77
LDB1-203ENST00000461873 TMEM265A0A087WTH1 108 aa10.24□□□□□ -0.77
LDB1-203ENST00000461873 A6NJR5 290 aa10.24□□□□□ -0.77
LDB1-203ENST00000461873 CTAGE5O15320 804 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms