RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 UBAC1Q9BSL1 405 aa20.88■□□□□ 0.93
SSB-206ENST00000461708 WNT8AQ9H1J5 351 aa20.88■□□□□ 0.93
SSB-206ENST00000461708 GPHNQ9NQX3 736 aaPredicted RBP20.88■□□□□ 0.93
SSB-206ENST00000461708 UMODL1Q5DID0 1318 aa20.87■□□□□ 0.93
SSB-206ENST00000461708 PARP1P09874 1014 aaKnown RBP20.87■□□□□ 0.93
SSB-206ENST00000461708 PTPN11Q06124 597 aaPredicted RBP20.87■□□□□ 0.93
SSB-206ENST00000461708 TTLL4Q14679 1199 aa20.87■□□□□ 0.93
SSB-206ENST00000461708 NFRKBQ6P4R8 1299 aa20.87■□□□□ 0.93
SSB-206ENST00000461708 NSUN6Q8TEA1 469 aaKnown RBP20.87■□□□□ 0.93
SSB-206ENST00000461708 IWS1Q96ST2 819 aa20.87■□□□□ 0.93
SSB-206ENST00000461708 PBX4Q9BYU1 374 aa20.87■□□□□ 0.93
SSB-206ENST00000461708 CPVLQ9H3G5 476 aa20.87■□□□□ 0.93
SSB-206ENST00000461708 CHD7Q9P2D1 2997 aa20.86■□□□□ 0.93
SSB-206ENST00000461708 PFKMP08237 780 aa20.86■□□□□ 0.93
SSB-206ENST00000461708 MYL3P08590 195 aa20.86■□□□□ 0.93
SSB-206ENST00000461708 TXNP10599 105 aaKnown RBP20.86■□□□□ 0.93
SSB-206ENST00000461708 RAB30Q15771 203 aa20.86■□□□□ 0.93
SSB-206ENST00000461708 QRICH1Q2TAL8 776 aa20.86■□□□□ 0.93
SSB-206ENST00000461708 CCDC62Q6P9F0 684 aa20.86■□□□□ 0.93
SSB-206ENST00000461708 SYTL5Q8TDW5 730 aaPredicted RBP20.86■□□□□ 0.93
SSB-206ENST00000461708 COL25A1Q9BXS0 654 aaPredicted RBP20.86■□□□□ 0.93
SSB-206ENST00000461708 MRPL11Q9Y3B7 192 aaKnown RBP20.86■□□□□ 0.93
SSB-206ENST00000461708 VCANP13611 3396 aa20.86■□□□□ 0.93
SSB-206ENST00000461708 CCL23P55773 120 aa20.85■□□□□ 0.93
SSB-206ENST00000461708 GHRHRQ02643 423 aa20.85■□□□□ 0.93
SSB-206ENST00000461708 FBXO11Q86XK2 927 aa20.85■□□□□ 0.93
SSB-206ENST00000461708 JMJD4Q9H9V9 463 aa20.85■□□□□ 0.93
SSB-206ENST00000461708 TRMT13Q9NUP7 481 aaKnown RBP20.85■□□□□ 0.93
SSB-206ENST00000461708 CXXC1Q9P0U4 656 aaPredicted RBP20.85■□□□□ 0.93
SSB-206ENST00000461708 MSRAQ9UJ68 235 aa20.85■□□□□ 0.93
SSB-206ENST00000461708 KIAA1217Q5T5P2 1943 aa20.84■□□□□ 0.93
SSB-206ENST00000461708 GRXCR1A8MXD5 290 aa20.84■□□□□ 0.93
SSB-206ENST00000461708 PBX2P40425 430 aa20.84■□□□□ 0.93
SSB-206ENST00000461708 SEC23AQ15436 765 aa20.84■□□□□ 0.93
SSB-206ENST00000461708 NBPF20Q3BBV1 942 aa20.84■□□□□ 0.93
SSB-206ENST00000461708 IFIT1BQ5T764 474 aaKnown RBP20.84■□□□□ 0.93
SSB-206ENST00000461708 TTC22Q5TAA0 569 aa20.84■□□□□ 0.93
SSB-206ENST00000461708 VWCEQ96DN2 955 aa20.84■□□□□ 0.93
SSB-206ENST00000461708 MAP3K20Q9NYL2 800 aaKnown RBP20.84■□□□□ 0.93
SSB-206ENST00000461708 TRANK1O15050 2925 aa20.84■□□□□ 0.93
SSB-206ENST00000461708 PITPNM1O00562 1244 aa20.83■□□□□ 0.93
SSB-206ENST00000461708 ARIH2O95376 493 aa20.83■□□□□ 0.93
SSB-206ENST00000461708 RFC2P35250 354 aa20.83■□□□□ 0.93
SSB-206ENST00000461708 STXBP2Q15833 593 aa20.83■□□□□ 0.93
SSB-206ENST00000461708 SAMD3Q8N6K7 520 aa20.83■□□□□ 0.93
SSB-206ENST00000461708 TBC1D5Q92609 795 aa20.83■□□□□ 0.93
SSB-206ENST00000461708 COPS5Q92905 334 aa20.83■□□□□ 0.93
SSB-206ENST00000461708 MTMR8Q96EF0 704 aa20.83■□□□□ 0.93
SSB-206ENST00000461708 TAAR1Q96RJ0 339 aa20.83■□□□□ 0.93
SSB-206ENST00000461708 RMDN3Q96TC7 470 aa20.83■□□□□ 0.93
SSB-206ENST00000461708 IL25Q9H293 177 aa20.83■□□□□ 0.93
SSB-206ENST00000461708 COL20A1Q9P218 1284 aa20.83■□□□□ 0.93
SSB-206ENST00000461708 NCOR1O75376 2440 aa20.83■□□□□ 0.92
SSB-206ENST00000461708 DHX16O60231 1041 aaKnown RBP20.82■□□□□ 0.92
SSB-206ENST00000461708 GH1P01241 217 aa20.82■□□□□ 0.92
SSB-206ENST00000461708 PDE4AP27815 886 aa20.82■□□□□ 0.92
SSB-206ENST00000461708 OTOP2Q7RTS6 562 aa20.82■□□□□ 0.92
SSB-206ENST00000461708 RUFY2Q8WXA3 655 aa20.82■□□□□ 0.92
SSB-206ENST00000461708 AMNQ9BXJ7 453 aa20.82■□□□□ 0.92
SSB-206ENST00000461708 SLC4A7Q9Y6M7 1214 aa20.82■□□□□ 0.92
SSB-206ENST00000461708 KLRF2D3W0D1 207 aa20.81■□□□□ 0.92
SSB-206ENST00000461708 EIF3JO75822 258 aaKnown RBP20.81■□□□□ 0.92
SSB-206ENST00000461708 CYP2C9P11712 490 aa20.81■□□□□ 0.92
SSB-206ENST00000461708 GSPT1P15170 499 aaKnown RBP20.81■□□□□ 0.92
SSB-206ENST00000461708 HSD17B4P51659 736 aa20.81■□□□□ 0.92
SSB-206ENST00000461708 TRDNQ13061 729 aa20.81■□□□□ 0.92
SSB-206ENST00000461708 TRAF1Q13077 416 aa20.81■□□□□ 0.92
SSB-206ENST00000461708 SESTD1Q86VW0 696 aa20.81■□□□□ 0.92
SSB-206ENST00000461708 EMID1Q96A84 441 aaPredicted RBP20.81■□□□□ 0.92
SSB-206ENST00000461708 U3KPZ7 1027 aaPredicted RBP20.81■□□□□ 0.92
SSB-206ENST00000461708 GBF1Q92538 1859 aa20.8■□□□□ 0.92
SSB-206ENST00000461708 PALM3A6NDB9 673 aaPredicted RBP20.8■□□□□ 0.92
SSB-206ENST00000461708 ARHGAP1Q07960 439 aa20.8■□□□□ 0.92
SSB-206ENST00000461708 FAM47CQ5HY64 1035 aa20.8■□□□□ 0.92
SSB-206ENST00000461708 ARHGEF16Q5VV41 709 aa20.8■□□□□ 0.92
SSB-206ENST00000461708 STAG2Q8N3U4 1231 aa20.8■□□□□ 0.92
SSB-206ENST00000461708 SCLYQ96I15 445 aa20.8■□□□□ 0.92
SSB-206ENST00000461708 GAS2L1Q99501 681 aaPredicted RBP20.8■□□□□ 0.92
SSB-206ENST00000461708 VAT1LQ9HCJ6 419 aa20.8■□□□□ 0.92
SSB-206ENST00000461708 ZBTB5O15062 677 aa20.79■□□□□ 0.92
SSB-206ENST00000461708 MMP3P08254 477 aa20.79■□□□□ 0.92
SSB-206ENST00000461708 BFSP2Q13515 415 aa20.79■□□□□ 0.92
SSB-206ENST00000461708 SEPT14Q6ZU15 432 aa20.79■□□□□ 0.92
SSB-206ENST00000461708 CYB5R4Q7L1T6 521 aa20.79■□□□□ 0.92
SSB-206ENST00000461708 AFG1LQ8WV93 481 aa20.79■□□□□ 0.92
SSB-206ENST00000461708 SLC28A3Q9HAS3 691 aa20.79■□□□□ 0.92
SSB-206ENST00000461708 PXMP2Q9NR77 195 aa20.79■□□□□ 0.92
SSB-206ENST00000461708 MAD2L2Q9UI95 211 aa20.79■□□□□ 0.92
SSB-206ENST00000461708 DDX41Q9UJV9 622 aaKnown RBP20.79■□□□□ 0.92
SSB-206ENST00000461708 PCDHA11Q9Y5I1 949 aa20.79■□□□□ 0.92
SSB-206ENST00000461708 TANC1Q9C0D5 1861 aa20.78■□□□□ 0.92
SSB-206ENST00000461708 OPLAHO14841 1288 aa20.78■□□□□ 0.92
SSB-206ENST00000461708 NR3C2P08235 984 aa20.78■□□□□ 0.92
SSB-206ENST00000461708 ACTN1P12814 892 aa20.78■□□□□ 0.92
SSB-206ENST00000461708 CASTP20810 708 aaKnown RBP20.78■□□□□ 0.92
SSB-206ENST00000461708 CHMLP26374 656 aa20.78■□□□□ 0.92
SSB-206ENST00000461708 LY6KQ17RY6 165 aa20.78■□□□□ 0.92
SSB-206ENST00000461708 STOX1Q6ZVD7 989 aa20.78■□□□□ 0.92
SSB-206ENST00000461708 RETREG2Q8NC44 543 aa20.78■□□□□ 0.92
SSB-206ENST00000461708 YBX2Q9Y2T7 364 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms