RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 CTNNA3Q9UI47 895 aa17.66■□□□□ 0.42
COL16A1-206ENST00000461217 TNKSO95271 1327 aa17.66■□□□□ 0.42
COL16A1-206ENST00000461217 ABCB11O95342 1321 aa17.66■□□□□ 0.42
COL16A1-206ENST00000461217 ZBBXA8MT70 800 aa17.65■□□□□ 0.42
COL16A1-206ENST00000461217 PARP1P09874 1014 aaKnown RBP17.65■□□□□ 0.42
COL16A1-206ENST00000461217 EDNRBP24530 442 aa17.65■□□□□ 0.42
COL16A1-206ENST00000461217 CHMP4BP1P59074 171 aa17.65■□□□□ 0.42
COL16A1-206ENST00000461217 RPUSD2Q8IZ73 545 aaKnown RBP17.65■□□□□ 0.42
COL16A1-206ENST00000461217 COPS5Q92905 334 aa17.65■□□□□ 0.42
COL16A1-206ENST00000461217 SCLYQ96I15 445 aa17.65■□□□□ 0.42
COL16A1-206ENST00000461217 KRT23Q9C075 422 aa17.65■□□□□ 0.42
COL16A1-206ENST00000461217 TRMT13Q9NUP7 481 aaKnown RBP17.65■□□□□ 0.42
COL16A1-206ENST00000461217 CYP2C9P11712 490 aa17.64■□□□□ 0.41
COL16A1-206ENST00000461217 TTLL4Q14679 1199 aa17.64■□□□□ 0.41
COL16A1-206ENST00000461217 ADGRF4Q8IZF3 695 aa17.64■□□□□ 0.41
COL16A1-206ENST00000461217 ENAHQ8N8S7 591 aaPredicted RBP17.64■□□□□ 0.41
COL16A1-206ENST00000461217 CNNM2Q9H8M5 875 aa17.64■□□□□ 0.41
COL16A1-206ENST00000461217 VAT1LQ9HCJ6 419 aa17.64■□□□□ 0.41
COL16A1-206ENST00000461217 ZSWIM5Q9P217 1185 aa17.64■□□□□ 0.41
COL16A1-206ENST00000461217 KPNA6O60684 536 aa17.63■□□□□ 0.41
COL16A1-206ENST00000461217 QRICH1Q2TAL8 776 aa17.63■□□□□ 0.41
COL16A1-206ENST00000461217 NBPF20Q3BBV1 942 aa17.63■□□□□ 0.41
COL16A1-206ENST00000461217 MCF2L2Q86YR7 1114 aa17.63■□□□□ 0.41
COL16A1-206ENST00000461217 RGS22Q8NE09 1264 aa17.63■□□□□ 0.41
COL16A1-206ENST00000461217 PPP1R13LQ8WUF5 828 aa17.63■□□□□ 0.41
COL16A1-206ENST00000461217 PPM1EQ8WY54 764 aa17.63■□□□□ 0.41
COL16A1-206ENST00000461217 NKX2-4Q9H2Z4 354 aa17.63■□□□□ 0.41
COL16A1-206ENST00000461217 PRDM12Q9H4Q4 367 aa17.63■□□□□ 0.41
COL16A1-206ENST00000461217 SLC28A3Q9HAS3 691 aa17.63■□□□□ 0.41
COL16A1-206ENST00000461217 NOD1Q9Y239 953 aa17.63■□□□□ 0.41
COL16A1-206ENST00000461217 SLC4A7Q9Y6M7 1214 aa17.63■□□□□ 0.41
COL16A1-206ENST00000461217 A6NJR5 290 aa17.62■□□□□ 0.41
COL16A1-206ENST00000461217 IFIT1BQ5T764 474 aaKnown RBP17.62■□□□□ 0.41
COL16A1-206ENST00000461217 SEPT14Q6ZU15 432 aa17.62■□□□□ 0.41
COL16A1-206ENST00000461217 DEFB128Q7Z7B8 93 aa17.62■□□□□ 0.41
COL16A1-206ENST00000461217 FBXO11Q86XK2 927 aa17.62■□□□□ 0.41
COL16A1-206ENST00000461217 SYTL5Q8TDW5 730 aaPredicted RBP17.62■□□□□ 0.41
COL16A1-206ENST00000461217 NSUN6Q8TEA1 469 aaKnown RBP17.62■□□□□ 0.41
COL16A1-206ENST00000461217 TBC1D5Q92609 795 aa17.62■□□□□ 0.41
COL16A1-206ENST00000461217 ANKS1AQ92625 1134 aa17.62■□□□□ 0.41
COL16A1-206ENST00000461217 TAAR1Q96RJ0 339 aa17.62■□□□□ 0.41
COL16A1-206ENST00000461217 MRPL11Q9Y3B7 192 aaKnown RBP17.62■□□□□ 0.41
COL16A1-206ENST00000461217 LAMA2P24043 3122 aaKnown RBP17.62■□□□□ 0.41
COL16A1-206ENST00000461217 ARIH2O95376 493 aa17.61■□□□□ 0.41
COL16A1-206ENST00000461217 PFKMP08237 780 aa17.61■□□□□ 0.41
COL16A1-206ENST00000461217 NFRKBQ6P4R8 1299 aa17.61■□□□□ 0.41
COL16A1-206ENST00000461217 CHST3Q7LGC8 479 aa17.61■□□□□ 0.41
COL16A1-206ENST00000461217 USP38Q8NB14 1042 aa17.61■□□□□ 0.41
COL16A1-206ENST00000461217 RETREG2Q8NC44 543 aa17.61■□□□□ 0.41
COL16A1-206ENST00000461217 RMDN3Q96TC7 470 aa17.61■□□□□ 0.41
COL16A1-206ENST00000461217 MAF1Q9H063 256 aa17.61■□□□□ 0.41
COL16A1-206ENST00000461217 CFBP00751 764 aa17.6■□□□□ 0.41
COL16A1-206ENST00000461217 GH1P01241 217 aa17.6■□□□□ 0.41
COL16A1-206ENST00000461217 IGFBP4P22692 258 aa17.6■□□□□ 0.41
COL16A1-206ENST00000461217 RABGGTBP53611 331 aa17.6■□□□□ 0.41
COL16A1-206ENST00000461217 STXBP2Q15833 593 aa17.6■□□□□ 0.41
COL16A1-206ENST00000461217 ARHGEF16Q5VV41 709 aa17.6■□□□□ 0.41
COL16A1-206ENST00000461217 JMJD4Q9H9V9 463 aa17.6■□□□□ 0.41
COL16A1-206ENST00000461217 COL20A1Q9P218 1284 aa17.6■□□□□ 0.41
COL16A1-206ENST00000461217 YBX2Q9Y2T7 364 aaKnown RBP17.6■□□□□ 0.41
COL16A1-206ENST00000461217 GBF1Q92538 1859 aa17.59■□□□□ 0.41
COL16A1-206ENST00000461217 ACTN1P12814 892 aa17.59■□□□□ 0.41
COL16A1-206ENST00000461217 EIF2AK2P19525 551 aaKnown RBP17.59■□□□□ 0.41
COL16A1-206ENST00000461217 PDE4AP27815 886 aa17.59■□□□□ 0.41
COL16A1-206ENST00000461217 PTPN11Q06124 597 aaPredicted RBP17.59■□□□□ 0.41
COL16A1-206ENST00000461217 TRDNQ13061 729 aa17.59■□□□□ 0.41
COL16A1-206ENST00000461217 LY6KQ17RY6 165 aa17.59■□□□□ 0.41
COL16A1-206ENST00000461217 PPP2R2DQ66LE6 453 aa17.59■□□□□ 0.41
COL16A1-206ENST00000461217 AFG1LQ8WV93 481 aa17.59■□□□□ 0.41
COL16A1-206ENST00000461217 IWS1Q96ST2 819 aa17.59■□□□□ 0.41
COL16A1-206ENST00000461217 AMNQ9BXJ7 453 aa17.59■□□□□ 0.41
COL16A1-206ENST00000461217 MMP3P08254 477 aa17.58■□□□□ 0.4
COL16A1-206ENST00000461217 ATP2A2P16615 1042 aaKnown RBP17.58■□□□□ 0.4
COL16A1-206ENST00000461217 BFSP2Q13515 415 aa17.58■□□□□ 0.4
COL16A1-206ENST00000461217 TTC22Q5TAA0 569 aa17.58■□□□□ 0.4
COL16A1-206ENST00000461217 CCDC62Q6P9F0 684 aa17.58■□□□□ 0.4
COL16A1-206ENST00000461217 STAG2Q8N3U4 1231 aa17.58■□□□□ 0.4
COL16A1-206ENST00000461217 SYMPKQ92797 1274 aaKnown RBP17.58■□□□□ 0.4
COL16A1-206ENST00000461217 FTOQ9C0B1 505 aaKnown RBP eCLIP17.58■□□□□ 0.4
COL16A1-206ENST00000461217 IL25Q9H293 177 aa17.58■□□□□ 0.4
COL16A1-206ENST00000461217 MYH6P13533 1939 aa17.57■□□□□ 0.4
COL16A1-206ENST00000461217 TANC1Q9C0D5 1861 aa17.57■□□□□ 0.4
COL16A1-206ENST00000461217 KLRF2D3W0D1 207 aa17.57■□□□□ 0.4
COL16A1-206ENST00000461217 PITPNM1O00562 1244 aa17.57■□□□□ 0.4
COL16A1-206ENST00000461217 CASTP20810 708 aaKnown RBP17.57■□□□□ 0.4
COL16A1-206ENST00000461217 RFC2P35250 354 aa17.57■□□□□ 0.4
COL16A1-206ENST00000461217 ARHGAP1Q07960 439 aa17.57■□□□□ 0.4
COL16A1-206ENST00000461217 CCDC85BQ15834 202 aaPredicted RBP17.57■□□□□ 0.4
COL16A1-206ENST00000461217 SKAP1Q86WV1 359 aa17.57■□□□□ 0.4
COL16A1-206ENST00000461217 HOMER1Q86YM7 354 aa17.57■□□□□ 0.4
COL16A1-206ENST00000461217 CCDC155Q8N6L0 562 aa17.57■□□□□ 0.4
COL16A1-206ENST00000461217 RUFY2Q8WXA3 655 aa17.57■□□□□ 0.4
COL16A1-206ENST00000461217 PXMP2Q9NR77 195 aa17.57■□□□□ 0.4
COL16A1-206ENST00000461217 PCDHA11Q9Y5I1 949 aa17.57■□□□□ 0.4
COL16A1-206ENST00000461217 MRVI1Q9Y6F6 885 aa17.57■□□□□ 0.4
COL16A1-206ENST00000461217 SCN10AQ9Y5Y9 1956 aa17.57■□□□□ 0.4
COL16A1-206ENST00000461217 ERICH2A1L162 156 aa17.56■□□□□ 0.4
COL16A1-206ENST00000461217 IQCF3P0C7M6 154 aa17.56■□□□□ 0.4
COL16A1-206ENST00000461217 GSPT1P15170 499 aaKnown RBP17.56■□□□□ 0.4
COL16A1-206ENST00000461217 MYOGP15173 224 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms