RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 TEX2Q8IWB9 1127 aa18.7■□□□□ 0.58
SHANK1-205ENST00000461154 NSUN6Q8TEA1 469 aaKnown RBP18.7■□□□□ 0.58
SHANK1-205ENST00000461154 DIS3LQ8TF46 1054 aaKnown RBP18.7■□□□□ 0.58
SHANK1-205ENST00000461154 CCDC12Q8WUD4 166 aaPredicted RBP18.7■□□□□ 0.58
SHANK1-205ENST00000461154 GPKOWQ92917 476 aaPredicted RBP eCLIP18.7■□□□□ 0.58
SHANK1-205ENST00000461154 PURBQ96QR8 312 aaKnown RBP18.7■□□□□ 0.58
SHANK1-205ENST00000461154 BARHL2Q9NY43 387 aa18.7■□□□□ 0.58
SHANK1-205ENST00000461154 FAM184BQ9ULE4 1060 aa18.7■□□□□ 0.58
SHANK1-205ENST00000461154 LIMCH1Q9UPQ0 1083 aa18.7■□□□□ 0.58
SHANK1-205ENST00000461154 PIK3CDO00329 1044 aa18.69■□□□□ 0.58
SHANK1-205ENST00000461154 HOXA13P31271 388 aaPredicted RBP18.69■□□□□ 0.58
SHANK1-205ENST00000461154 PDE4DQ08499 809 aa18.69■□□□□ 0.58
SHANK1-205ENST00000461154 ACVR2BQ13705 512 aa18.69■□□□□ 0.58
SHANK1-205ENST00000461154 ME3Q16798 604 aa18.69■□□□□ 0.58
SHANK1-205ENST00000461154 SMARCC2Q8TAQ2 1214 aa18.69■□□□□ 0.58
SHANK1-205ENST00000461154 MORC4Q8TE76 937 aa18.69■□□□□ 0.58
SHANK1-205ENST00000461154 RMDN3Q96TC7 470 aa18.69■□□□□ 0.58
SHANK1-205ENST00000461154 GLT8D2Q9H1C3 349 aa18.69■□□□□ 0.58
SHANK1-205ENST00000461154 PSTPIP2Q9H939 334 aa18.69■□□□□ 0.58
SHANK1-205ENST00000461154 COL20A1Q9P218 1284 aa18.69■□□□□ 0.58
SHANK1-205ENST00000461154 ZHX1Q9UKY1 873 aaPredicted RBP18.69■□□□□ 0.58
SHANK1-205ENST00000461154 ASTN1O14525 1302 aa18.69■□□□□ 0.58
SHANK1-205ENST00000461154 PDE4DIPQ5VU43 2346 aa18.68■□□□□ 0.58
SHANK1-205ENST00000461154 MCM3APO60318 1980 aa18.68■□□□□ 0.58
SHANK1-205ENST00000461154 STXBP3O00186 592 aa18.68■□□□□ 0.58
SHANK1-205ENST00000461154 DNM1LO00429 736 aa18.68■□□□□ 0.58
SHANK1-205ENST00000461154 ARHGEF16Q5VV41 709 aa18.68■□□□□ 0.58
SHANK1-205ENST00000461154 ANO1Q5XXA6 986 aa18.68■□□□□ 0.58
SHANK1-205ENST00000461154 GTF3C6Q969F1 213 aa18.68■□□□□ 0.58
SHANK1-205ENST00000461154 ZSCAN31Q96LW9 406 aaPredicted RBP18.68■□□□□ 0.58
SHANK1-205ENST00000461154 TAAR1Q96RJ0 339 aa18.68■□□□□ 0.58
SHANK1-205ENST00000461154 IWS1Q96ST2 819 aa18.68■□□□□ 0.58
SHANK1-205ENST00000461154 DEXIO95424 95 aa18.67■□□□□ 0.58
SHANK1-205ENST00000461154 COL6A1P12109 1028 aa18.67■□□□□ 0.58
SHANK1-205ENST00000461154 PKN1Q16512 942 aa18.67■□□□□ 0.58
SHANK1-205ENST00000461154 FCHSD1Q86WN1 690 aa18.67■□□□□ 0.58
SHANK1-205ENST00000461154 CCDC148Q8NFR7 591 aa18.67■□□□□ 0.58
SHANK1-205ENST00000461154 VTA1Q9NP79 307 aa18.67■□□□□ 0.58
SHANK1-205ENST00000461154 XPNPEP3Q9NQH7 507 aa18.67■□□□□ 0.58
SHANK1-205ENST00000461154 PXMP2Q9NR77 195 aa18.67■□□□□ 0.58
SHANK1-205ENST00000461154 SH2B1Q9NRF2 756 aaPredicted RBP18.67■□□□□ 0.58
SHANK1-205ENST00000461154 NR2E3Q9Y5X4 410 aa18.67■□□□□ 0.58
SHANK1-205ENST00000461154 KBTBD13C9JR72 458 aa18.66■□□□□ 0.58
SHANK1-205ENST00000461154 PPFIA3O75145 1194 aa18.66■□□□□ 0.58
SHANK1-205ENST00000461154 LARGE1O95461 756 aa18.66■□□□□ 0.58
SHANK1-205ENST00000461154 EDNRBP24530 442 aa18.66■□□□□ 0.58
SHANK1-205ENST00000461154 ADCY7P51828 1080 aa18.66■□□□□ 0.58
SHANK1-205ENST00000461154 NECAB1Q8N987 351 aa18.66■□□□□ 0.58
SHANK1-205ENST00000461154 RIC8AQ9NPQ8 531 aa18.66■□□□□ 0.58
SHANK1-205ENST00000461154 STK36Q9NRP7 1315 aa18.66■□□□□ 0.58
SHANK1-205ENST00000461154 LRRC37A2A6NM11 1700 aa18.66■□□□□ 0.58
SHANK1-205ENST00000461154 ESYT2A0FGR8 921 aa18.65■□□□□ 0.58
SHANK1-205ENST00000461154 SMCO2A6NFE2 343 aa18.65■□□□□ 0.58
SHANK1-205ENST00000461154 MEIS2O14770 477 aa18.65■□□□□ 0.58
SHANK1-205ENST00000461154 EVI5O60447 810 aa18.65■□□□□ 0.58
SHANK1-205ENST00000461154 DUSP11O75319 330 aaKnown RBP18.65■□□□□ 0.58
SHANK1-205ENST00000461154 SLC34A2O95436 690 aa18.65■□□□□ 0.58
SHANK1-205ENST00000461154 EIF2AK2P19525 551 aaKnown RBP18.65■□□□□ 0.58
SHANK1-205ENST00000461154 MCM2P49736 904 aa18.65■□□□□ 0.58
SHANK1-205ENST00000461154 LRRC41Q15345 812 aa18.65■□□□□ 0.58
SHANK1-205ENST00000461154 STXBP2Q15833 593 aa18.65■□□□□ 0.58
SHANK1-205ENST00000461154 CCDC144BQ3MJ40 725 aa18.65■□□□□ 0.58
SHANK1-205ENST00000461154 GJC2Q5T442 439 aaPredicted RBP18.65■□□□□ 0.58
SHANK1-205ENST00000461154 USP17L6PQ6QN14 398 aa18.65■□□□□ 0.58
SHANK1-205ENST00000461154 RNF180Q86T96 592 aa18.65■□□□□ 0.58
SHANK1-205ENST00000461154 FAM177A1Q8N128 213 aaPredicted RBP18.65■□□□□ 0.58
SHANK1-205ENST00000461154 KATNBL1Q9H079 304 aa18.65■□□□□ 0.58
SHANK1-205ENST00000461154 EHMT1Q9H9B1 1298 aa18.65■□□□□ 0.58
SHANK1-205ENST00000461154 C6orf50Q9HD87 102 aa18.65■□□□□ 0.58
SHANK1-205ENST00000461154 SH3GLB2Q9NR46 395 aa18.65■□□□□ 0.58
SHANK1-205ENST00000461154 SPDYE3A6NKU9 549 aa18.64■□□□□ 0.57
SHANK1-205ENST00000461154 MYCNP04198 464 aaPredicted RBP18.64■□□□□ 0.57
SHANK1-205ENST00000461154 NR3C2P08235 984 aa18.64■□□□□ 0.57
SHANK1-205ENST00000461154 GNA11P29992 359 aa18.64■□□□□ 0.57
SHANK1-205ENST00000461154 TYW1BQ6NUM6 668 aa18.64■□□□□ 0.57
SHANK1-205ENST00000461154 EEPD1Q7L9B9 569 aa18.64■□□□□ 0.57
SHANK1-205ENST00000461154 FBXO16Q8IX29 292 aaPredicted RBP18.64■□□□□ 0.57
SHANK1-205ENST00000461154 WASF1Q92558 559 aa18.64■□□□□ 0.57
SHANK1-205ENST00000461154 PDCD2LQ9BRP1 358 aa18.64■□□□□ 0.57
SHANK1-205ENST00000461154 SENP6Q9GZR1 1112 aaPredicted RBP18.64■□□□□ 0.57
SHANK1-205ENST00000461154 SPC25Q9HBM1 224 aa18.64■□□□□ 0.57
SHANK1-205ENST00000461154 FRMPD3Q5JV73 1810 aa18.64■□□□□ 0.57
SHANK1-205ENST00000461154 FOSP01100 380 aaPredicted RBP18.63■□□□□ 0.57
SHANK1-205ENST00000461154 XBP1P17861 261 aa18.63■□□□□ 0.57
SHANK1-205ENST00000461154 CCND2P30279 289 aa18.63■□□□□ 0.57
SHANK1-205ENST00000461154 PGM5Q15124 567 aa18.63■□□□□ 0.57
SHANK1-205ENST00000461154 MCTP2Q6DN12 878 aa18.63■□□□□ 0.57
SHANK1-205ENST00000461154 IQSEC1Q6DN90 963 aa18.63■□□□□ 0.57
SHANK1-205ENST00000461154 BICD2Q8TD16 824 aa18.63■□□□□ 0.57
SHANK1-205ENST00000461154 ZMYND12Q9H0C1 365 aa18.63■□□□□ 0.57
SHANK1-205ENST00000461154 ORC3Q9UBD5 711 aaPredicted RBP18.63■□□□□ 0.57
SHANK1-205ENST00000461154 DDX49Q9Y6V7 483 aaKnown RBP18.63■□□□□ 0.57
SHANK1-205ENST00000461154 EIF3JO75822 258 aaKnown RBP18.62■□□□□ 0.57
SHANK1-205ENST00000461154 PGK1P00558 417 aa18.62■□□□□ 0.57
SHANK1-205ENST00000461154 TNFAIP2Q03169 654 aa18.62■□□□□ 0.57
SHANK1-205ENST00000461154 UBE2SQ16763 222 aa18.62■□□□□ 0.57
SHANK1-205ENST00000461154 SCFD2Q8WU76 684 aa18.62■□□□□ 0.57
SHANK1-205ENST00000461154 LLPHQ9BRT6 129 aaKnown RBP18.62■□□□□ 0.57
SHANK1-205ENST00000461154 TSEN34Q9BSV6 310 aaKnown RBP18.62■□□□□ 0.57
SHANK1-205ENST00000461154 FRMPD4Q14CM0 1322 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms