RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 IRX5P78411 483 aaPredicted RBP23.96■■□□□ 1.43
VARS-218ENST00000459667 RUFY3Q7L099 469 aa23.96■■□□□ 1.43
VARS-218ENST00000459667 TLK2Q86UE8 772 aa23.96■■□□□ 1.43
VARS-218ENST00000459667 FBXL16Q8N461 479 aa23.96■■□□□ 1.43
VARS-218ENST00000459667 IWS1Q96ST2 819 aa23.96■■□□□ 1.43
VARS-218ENST00000459667 AGXT2Q9BYV1 514 aa23.96■■□□□ 1.43
VARS-218ENST00000459667 ZSWIM6Q9HCJ5 1215 aa23.96■■□□□ 1.43
VARS-218ENST00000459667 PXMP2Q9NR77 195 aa23.96■■□□□ 1.43
VARS-218ENST00000459667 A0A1W2PQ45 241 aaPredicted RBP23.95■■□□□ 1.42
VARS-218ENST00000459667 A0A1W2PQY0 241 aa23.95■■□□□ 1.42
VARS-218ENST00000459667 hCG_1642624A0A1W2PR95 340 aa23.95■■□□□ 1.42
VARS-218ENST00000459667 RBM47A0AV96 593 aaKnown RBP23.95■■□□□ 1.42
VARS-218ENST00000459667 METAP2P50579 478 aaKnown RBP eCLIP23.95■■□□□ 1.422e-10■■□□□ 13.9
VARS-218ENST00000459667 WDR11Q9BZH6 1224 aa23.95■■□□□ 1.42
VARS-218ENST00000459667 MOXD2PA6NHM9 499 aa23.94■■□□□ 1.42
VARS-218ENST00000459667 ACLYP53396 1101 aa23.94■■□□□ 1.42
VARS-218ENST00000459667 KCNA10Q16322 511 aa23.94■■□□□ 1.42
VARS-218ENST00000459667 DUSP28Q4G0W2 176 aa23.94■■□□□ 1.42
VARS-218ENST00000459667 GNASQ5JWF2 1037 aa23.94■■□□□ 1.42
VARS-218ENST00000459667 TMEM63BQ5T3F8 832 aa23.94■■□□□ 1.42
VARS-218ENST00000459667 CCSAPQ6IQ19 270 aaPredicted RBP23.94■■□□□ 1.42
VARS-218ENST00000459667 SLC39A5Q6ZMH5 540 aa23.94■■□□□ 1.42
VARS-218ENST00000459667 PCSK9Q8NBP7 692 aaKnown RBP23.94■■□□□ 1.42
VARS-218ENST00000459667 TM6SF1Q9BZW5 370 aa23.94■■□□□ 1.42
VARS-218ENST00000459667 AP5M1Q9H0R1 490 aa23.94■■□□□ 1.42
VARS-218ENST00000459667 CYP46A1Q9Y6A2 500 aa23.94■■□□□ 1.42
VARS-218ENST00000459667 DYNC1LI2O43237 492 aaPredicted RBP23.93■■□□□ 1.42
VARS-218ENST00000459667 PTGS1P23219 599 aa23.93■■□□□ 1.42
VARS-218ENST00000459667 CDC27P30260 824 aa23.93■■□□□ 1.42
VARS-218ENST00000459667 RTP1P59025 263 aa23.93■■□□□ 1.42
VARS-218ENST00000459667 NKX3-2P78367 333 aa23.93■■□□□ 1.42
VARS-218ENST00000459667 PPP2R5BQ15173 497 aa23.93■■□□□ 1.42
VARS-218ENST00000459667 STXBP2Q15833 593 aa23.93■■□□□ 1.42
VARS-218ENST00000459667 FCHSD1Q86WN1 690 aa23.93■■□□□ 1.42
VARS-218ENST00000459667 SCFD2Q8WU76 684 aa23.93■■□□□ 1.42
VARS-218ENST00000459667 FAM217BQ9NTX9 383 aaPredicted RBP23.93■■□□□ 1.42
VARS-218ENST00000459667 Q9Y3F1 56 aa23.93■■□□□ 1.42
VARS-218ENST00000459667 CEP290O15078 2479 aa23.93■■□□□ 1.42
VARS-218ENST00000459667 CTAGE5O15320 804 aa23.92■■□□□ 1.42
VARS-218ENST00000459667 NR3C2P08235 984 aa23.92■■□□□ 1.42
VARS-218ENST00000459667 BEX3Q00994 111 aa23.92■■□□□ 1.42
VARS-218ENST00000459667 FUT2Q10981 343 aa23.92■■□□□ 1.42
VARS-218ENST00000459667 CUL5Q93034 780 aa23.92■■□□□ 1.42
VARS-218ENST00000459667 PDCD2LQ9BRP1 358 aa23.92■■□□□ 1.42
VARS-218ENST00000459667 UPF3BQ9BZI7 483 aaKnown RBP23.92■■□□□ 1.42
VARS-218ENST00000459667 ZMYND8Q9ULU4 1186 aaPredicted RBP23.92■■□□□ 1.42
VARS-218ENST00000459667 ATP11BQ9Y2G3 1177 aa23.92■■□□□ 1.42
VARS-218ENST00000459667 NID2Q14112 1375 aa23.91■■□□□ 1.42
VARS-218ENST00000459667 KIAA1217Q5T5P2 1943 aa23.91■■□□□ 1.42
VARS-218ENST00000459667 CCDC196A0A1B0GTZ2 297 aa23.91■■□□□ 1.42
VARS-218ENST00000459667 ASGR1P07306 291 aa23.91■■□□□ 1.42
VARS-218ENST00000459667 TTLL4Q14679 1199 aa23.91■■□□□ 1.42
VARS-218ENST00000459667 SNX17Q15036 470 aa23.91■■□□□ 1.42
VARS-218ENST00000459667 FSCN1Q16658 493 aaKnown RBP23.91■■□□□ 1.42
VARS-218ENST00000459667 HEATR3Q7Z4Q2 680 aa23.91■■□□□ 1.42
VARS-218ENST00000459667 SMARCC2Q8TAQ2 1214 aa23.91■■□□□ 1.42
VARS-218ENST00000459667 GPKOWQ92917 476 aaPredicted RBP eCLIP23.91■■□□□ 1.42
VARS-218ENST00000459667 STARD7Q9NQZ5 370 aa23.91■■□□□ 1.42
VARS-218ENST00000459667 NKRFO15226 690 aaKnown RBP eCLIP23.9■■□□□ 1.42
VARS-218ENST00000459667 TXNP10599 105 aaKnown RBP23.9■■□□□ 1.42
VARS-218ENST00000459667 MYCLP12524 364 aaPredicted RBP23.9■■□□□ 1.42
VARS-218ENST00000459667 ADD1P35611 737 aaKnown RBP23.9■■□□□ 1.42
VARS-218ENST00000459667 TOB2Q14106 344 aaPredicted RBP23.9■■□□□ 1.42
VARS-218ENST00000459667 PGM5Q15124 567 aa23.9■■□□□ 1.42
VARS-218ENST00000459667 C1orf53Q5VUE5 145 aa23.9■■□□□ 1.42
VARS-218ENST00000459667 SEPT14Q6ZU15 432 aa23.9■■□□□ 1.42
VARS-218ENST00000459667 GLT1D1Q96MS3 346 aa23.9■■□□□ 1.42
VARS-218ENST00000459667 EIF3JO75822 258 aaKnown RBP23.89■■□□□ 1.41
VARS-218ENST00000459667 SYN1P17600 705 aa23.89■■□□□ 1.41
VARS-218ENST00000459667 TRIM60Q495X7 471 aa23.89■■□□□ 1.41
VARS-218ENST00000459667 USP17L6PQ6QN14 398 aa23.89■■□□□ 1.41
VARS-218ENST00000459667 OR6J1Q8NGC5 347 aa23.89■■□□□ 1.41
VARS-218ENST00000459667 V9GY48 417 aaPredicted RBP23.89■■□□□ 1.41
VARS-218ENST00000459667 PIK3CDO00329 1044 aa23.88■■□□□ 1.41
VARS-218ENST00000459667 MEIS2O14770 477 aa23.88■■□□□ 1.41
VARS-218ENST00000459667 ZEB2O60315 1214 aa23.88■■□□□ 1.41
VARS-218ENST00000459667 ARIH2O95376 493 aa23.88■■□□□ 1.41
VARS-218ENST00000459667 EVCP57679 992 aa23.88■■□□□ 1.41
VARS-218ENST00000459667 ANAPC15P60006 121 aa23.88■■□□□ 1.41
VARS-218ENST00000459667 WWC2Q6AWC2 1192 aa23.88■■□□□ 1.41
VARS-218ENST00000459667 IL31RAQ8NI17 732 aa23.88■■□□□ 1.41
VARS-218ENST00000459667 COPS5Q92905 334 aa23.88■■□□□ 1.41
VARS-218ENST00000459667 PSTPIP2Q9H939 334 aa23.88■■□□□ 1.41
VARS-218ENST00000459667 PDRG1Q9NUG6 133 aa23.88■■□□□ 1.41
VARS-218ENST00000459667 ELP1O95163 1332 aa23.87■■□□□ 1.41
VARS-218ENST00000459667 FRMPD4Q14CM0 1322 aa23.87■■□□□ 1.41
VARS-218ENST00000459667 hCG_1984214I3L0E3 225 aa23.87■■□□□ 1.41
VARS-218ENST00000459667 PDIA3P30101 505 aaKnown RBP23.87■■□□□ 1.41
VARS-218ENST00000459667 CCND2P30279 289 aa23.87■■□□□ 1.41
VARS-218ENST00000459667 CCDC62Q6P9F0 684 aa23.87■■□□□ 1.41
VARS-218ENST00000459667 CHRDL2Q6WN34 429 aa23.87■■□□□ 1.41
VARS-218ENST00000459667 VSIG10LQ86VR7 867 aa23.87■■□□□ 1.41
VARS-218ENST00000459667 ZNF713Q8N859 430 aaPredicted RBP23.87■■□□□ 1.41
VARS-218ENST00000459667 VTI1AQ96AJ9 217 aa23.87■■□□□ 1.41
VARS-218ENST00000459667 CPT1AP50416 773 aa23.86■■□□□ 1.41
VARS-218ENST00000459667 NAPAP54920 295 aa23.86■■□□□ 1.41
VARS-218ENST00000459667 PPP1R18Q6NYC8 613 aa23.86■■□□□ 1.41
VARS-218ENST00000459667 CXCL17Q6UXB2 119 aa23.86■■□□□ 1.41
VARS-218ENST00000459667 A0A0U1RQG5 324 aaPredicted RBP23.85■■□□□ 1.41
VARS-218ENST00000459667 CABYRO75952 493 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms