RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 SYNE3Q6ZMZ3 975 aa12.56□□□□□ -0.4
DDX39B-214ENST00000458640 RINLQ6ZS11 566 aa12.56□□□□□ -0.4
DDX39B-214ENST00000458640 PDILTQ8N807 584 aa12.56□□□□□ -0.4
DDX39B-214ENST00000458640 CAVIN3Q969G5 261 aa12.56□□□□□ -0.4
DDX39B-214ENST00000458640 MASTLQ96GX5 879 aa12.56□□□□□ -0.4
DDX39B-214ENST00000458640 TCEANC2Q96MN5 208 aa12.56□□□□□ -0.4
DDX39B-214ENST00000458640 EHD4Q9H223 541 aa12.56□□□□□ -0.4
DDX39B-214ENST00000458640 ARMT1Q9H993 441 aa12.56□□□□□ -0.4
DDX39B-214ENST00000458640 FANCLQ9NW38 375 aa12.56□□□□□ -0.4
DDX39B-214ENST00000458640 ATP6V0A2Q9Y487 856 aa12.56□□□□□ -0.4
DDX39B-214ENST00000458640 PYGBP11216 843 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 EPHB4P54760 987 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 ELF3P78545 371 aaPredicted RBP12.55□□□□□ -0.4
DDX39B-214ENST00000458640 CMPK2Q5EBM0 449 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 ACBD5Q5T8D3 534 aaPredicted RBP12.55□□□□□ -0.4
DDX39B-214ENST00000458640 TMTC1Q8IUR5 882 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 FBXL16Q8N461 479 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 LZTFL1Q9NQ48 299 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 DACH1Q9UI36 760 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 PCDHA7Q9UN72 937 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 SLC4A4Q9Y6R1 1079 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 NEDD4P46934 1319 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 GOLGA6L10A0A0M3HER8 536 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 C5orf60A6NFR6 353 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 PSMD14O00487 310 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 ANP32DO95626 131 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 CCND1P24385 295 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 TPP2P29144 1249 aaPredicted RBP12.55□□□□□ -0.4
DDX39B-214ENST00000458640 MDH1P40925 334 aaKnown RBP12.55□□□□□ -0.4
DDX39B-214ENST00000458640 SCTRP47872 440 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 EXOSC10Q01780 885 aaKnown RBP12.55□□□□□ -0.4
DDX39B-214ENST00000458640 DEUP1Q05D60 604 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 PDCLQ13371 301 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 LBRQ14739 615 aaKnown RBP12.55□□□□□ -0.4
DDX39B-214ENST00000458640 SEPT2Q15019 361 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 DZIP1Q86YF9 867 aaKnown RBP12.55□□□□□ -0.4
DDX39B-214ENST00000458640 IFNL3Q8IZI9 196 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 LCORLQ8N3X6 602 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 USP28Q96RU2 1077 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 LZTS2Q9BRK4 669 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 NUP58Q9BVL2 599 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 YIPF3Q9GZM5 350 aa12.55□□□□□ -0.4
DDX39B-214ENST00000458640 LRRD1A4D1F6 860 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 HMGB1P1B2RPK0 211 aaPredicted RBP12.54□□□□□ -0.4
DDX39B-214ENST00000458640 LINGO3P0C6S8 592 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 ALADP13716 330 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 ATP4AP20648 1035 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 RANBP1P43487 201 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 MYO1EQ12965 1108 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 PAPD7Q5XG87 772 aaKnown RBP12.54□□□□□ -0.4
DDX39B-214ENST00000458640 DPY19L2Q6NUT2 758 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 ZNF662Q6ZS27 426 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 TXNRD3Q86VQ6 643 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 MYLK4Q86YV6 388 aaPredicted RBP12.54□□□□□ -0.4
DDX39B-214ENST00000458640 MIGA1Q8NAN2 632 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 NSUN4Q96CB9 384 aaKnown RBP12.54□□□□□ -0.4
DDX39B-214ENST00000458640 SLX1AQ9BQ83 275 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 AGXT2Q9BYV1 514 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 RANBP17Q9H2T7 1088 aaKnown RBP12.54□□□□□ -0.4
DDX39B-214ENST00000458640 CNNM2Q9H8M5 875 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 HAUS2Q9NVX0 235 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 C6orf229H3BNL8 230 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 SMIM24O75264 130 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 FMNL1O95466 1100 aaPredicted RBP12.54□□□□□ -0.4
DDX39B-214ENST00000458640 GNAT1P11488 350 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 CMA1P23946 247 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 KIF5BP33176 963 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 GSTO1P78417 241 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 MRPS35P82673 323 aaKnown RBP12.54□□□□□ -0.4
DDX39B-214ENST00000458640 RASA3Q14644 834 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 SGSM1Q2NKQ1 1148 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 APBB1IPQ7Z5R6 666 aaPredicted RBP12.54□□□□□ -0.4
DDX39B-214ENST00000458640 PPFIBP1Q86W92 1011 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 CNGA4Q8IV77 575 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 TRIM42Q8IWZ5 723 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 MMGT1Q8N4V1 131 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 GBP7Q8N8V2 638 aaPredicted RBP12.54□□□□□ -0.4
DDX39B-214ENST00000458640 TBC1D16Q8TBP0 767 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 L3MBTL3Q96JM7 780 aaPredicted RBP12.54□□□□□ -0.4
DDX39B-214ENST00000458640 MAF1Q9H063 256 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 SLC5A4Q9NY91 659 aa12.54□□□□□ -0.4
DDX39B-214ENST00000458640 GSG1L2A8MUP6 293 aa12.53□□□□□ -0.4
DDX39B-214ENST00000458640 TMEM232C9JQI7 657 aa12.53□□□□□ -0.4
DDX39B-214ENST00000458640 H0YIN7 160 aa12.53□□□□□ -0.4
DDX39B-214ENST00000458640 CREB3O43889 395 aa12.53□□□□□ -0.4
DDX39B-214ENST00000458640 LDHBP07195 334 aaKnown RBP12.53□□□□□ -0.4
DDX39B-214ENST00000458640 NDUFA8P51970 172 aa12.53□□□□□ -0.4
DDX39B-214ENST00000458640 SH3BGRP55822 239 aaPredicted RBP12.53□□□□□ -0.4
DDX39B-214ENST00000458640 MECOMQ03112 1051 aa12.53□□□□□ -0.4
DDX39B-214ENST00000458640 ACCSLQ4AC99 568 aa12.53□□□□□ -0.4
DDX39B-214ENST00000458640 NUGGCQ68CJ6 796 aa12.53□□□□□ -0.4
DDX39B-214ENST00000458640 SESTD1Q86VW0 696 aa12.53□□□□□ -0.4
DDX39B-214ENST00000458640 MB21D2Q8IYB1 491 aaPredicted RBP12.53□□□□□ -0.4
DDX39B-214ENST00000458640 KIRREL3Q8IZU9 778 aa12.53□□□□□ -0.4
DDX39B-214ENST00000458640 CYFIP2Q96F07 1278 aa12.53□□□□□ -0.4
DDX39B-214ENST00000458640 RIOK1Q9BRS2 568 aaKnown RBP12.53□□□□□ -0.4
DDX39B-214ENST00000458640 DESI2Q9BSY9 194 aa12.53□□□□□ -0.4
DDX39B-214ENST00000458640 TRIM7Q9C029 511 aa12.53□□□□□ -0.4
DDX39B-214ENST00000458640 RNF41Q9H4P4 317 aaPredicted RBP12.53□□□□□ -0.4
DDX39B-214ENST00000458640 EPB41L4AQ9HCS5 686 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms