RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 B4DLN1 442 aa7.59□□□□□ -1.2
CUBNP3-201ENST00000457461 C6orf229H3BNL8 230 aa7.59□□□□□ -1.2
CUBNP3-201ENST00000457461 EVI5O60447 810 aa7.59□□□□□ -1.2
CUBNP3-201ENST00000457461 SMNDC1O75940 238 aaKnown RBP eCLIP7.59□□□□□ -1.2
CUBNP3-201ENST00000457461 LDHBP07195 334 aaKnown RBP7.59□□□□□ -1.2
CUBNP3-201ENST00000457461 CCDC166P0CW27 439 aa7.59□□□□□ -1.2
CUBNP3-201ENST00000457461 CNGA1P29973 690 aa7.59□□□□□ -1.2
CUBNP3-201ENST00000457461 EVCP57679 992 aa7.59□□□□□ -1.2
CUBNP3-201ENST00000457461 PPP4CP60510 307 aa7.59□□□□□ -1.2
CUBNP3-201ENST00000457461 NSUN2Q08J23 767 aaKnown RBP eCLIP7.59□□□□□ -1.2
CUBNP3-201ENST00000457461 APOBRQ0VD83 1088 aa7.59□□□□□ -1.2
CUBNP3-201ENST00000457461 ST3GAL1Q11201 340 aa7.59□□□□□ -1.2
CUBNP3-201ENST00000457461 CRELD2Q6UXH1 353 aaPredicted RBP7.59□□□□□ -1.2
CUBNP3-201ENST00000457461 DHX32Q7L7V1 743 aaKnown RBP7.59□□□□□ -1.2
CUBNP3-201ENST00000457461 TEKT4Q8WW24 435 aa7.59□□□□□ -1.2
CUBNP3-201ENST00000457461 ZSCAN31Q96LW9 406 aaPredicted RBP7.59□□□□□ -1.2
CUBNP3-201ENST00000457461 EYA3Q99504 573 aa7.59□□□□□ -1.2
CUBNP3-201ENST00000457461 ZWILCHQ9H900 591 aa7.59□□□□□ -1.2
CUBNP3-201ENST00000457461 SENP2Q9HC62 589 aa7.59□□□□□ -1.2
CUBNP3-201ENST00000457461 KLC4Q9NSK0 619 aa7.59□□□□□ -1.2
CUBNP3-201ENST00000457461 HDAC6Q9UBN7 1215 aa7.59□□□□□ -1.2
CUBNP3-201ENST00000457461 FAM169AQ9Y6X4 670 aa7.59□□□□□ -1.2
CUBNP3-201ENST00000457461 ADAMTSL1Q8N6G6 1762 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 GAKO14976 1311 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 PSDA5PKW4 1024 aaPredicted RBP7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 SRRM3A6NNA2 597 aaPredicted RBP7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 FAM25EA8MYX2 175 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 ZNF213O14771 459 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 TTI1O43156 1089 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 PRKAB2O43741 272 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 MGRN1O60291 552 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 LUC7L3O95232 432 aaKnown RBP7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 LARGE1O95461 756 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 BDNFP23560 247 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 CCT6AP40227 531 aaKnown RBP7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 USP5P45974 858 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 FKBP1AP62942 108 aaKnown RBP7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 GSTO1P78417 241 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 PDE4BQ07343 736 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 MYBPC3Q14896 1274 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 GRIK5Q16478 980 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 KIF4BQ2VIQ3 1234 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 CEP85LQ5SZL2 805 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 AKNAD1Q5T1N1 836 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 FAAH2Q6GMR7 532 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 CCDC70Q6NSX1 233 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 UBE2Q1Q7Z7E8 422 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 LCA5Q86VQ0 697 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 SESTD1Q86VW0 696 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 TBC1D10CQ8IV04 446 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 MYO1HQ8N1T3 1032 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 CCHCR1Q8TD31 782 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 TRPC4APQ8TEL6 797 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 TAF4BQ92750 862 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 NAF1Q96HR8 494 aaKnown RBP7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 IWS1Q96ST2 819 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 FUCA2Q9BTY2 467 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 VIPAS39Q9H9C1 493 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 TUBGCP4Q9UGJ1 667 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 PAIP2BQ9ULR5 123 aaKnown RBP7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 SLC4A4Q9Y6R1 1079 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 MROH7-TTC4A0A0A0MT08 1334 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 PHLPP2Q6ZVD8 1323 aa7.58□□□□□ -1.2
CUBNP3-201ENST00000457461 CCDC162PA2VCL2 907 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 A6NHS1 94 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 ZEB2O60315 1214 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 TADA3O75528 432 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 FGRP09769 529 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 TROVE2P10155 538 aaKnown RBP eCLIP7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 PSMC4P43686 418 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 ANTXR2P58335 489 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 HAND2P61296 217 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 TGFB2P61812 414 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 DYNLL1P63167 89 aaKnown RBP7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 NAA25Q14CX7 972 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 ME3Q16798 604 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 ERCC6LQ2NKX8 1250 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 PABPC1LQ4VXU2 614 aaKnown RBP7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 HDXQ7Z353 690 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 PODNQ7Z5L7 613 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 LUZP1Q86V48 1076 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 DZIP1Q86YF9 867 aaKnown RBP7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 KIAA0825Q8IV33 1275 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 TEX9Q8N6V9 391 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 TTLL6Q8N841 843 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 SPIRE2Q8WWL2 714 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 RABGGTAQ92696 567 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 KIF12Q96FN5 646 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 PARD6BQ9BYG5 372 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 NACAP1Q9BZK3 213 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 TANGO6Q9C0B7 1094 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 ZC3H12CQ9C0D7 883 aaKnown RBP7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 NAPBQ9H115 298 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 RYDENQ9NUL5 291 aaKnown RBP7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 ZMAT5Q9UDW3 170 aaKnown RBP7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 TPCN1Q9ULQ1 816 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 ZNF148Q9UQR1 794 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 SSX2IPQ9Y2D8 614 aa7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 GOLGB1Q14789 3259 aaKnown RBP7.57□□□□□ -1.2
CUBNP3-201ENST00000457461 ROBO3Q96MS0 1386 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms