RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 UNC93B1Q9H1C4 597 aa16.15■□□□□ 0.18
TIMP1-205ENST00000456754 PXMP2Q9NR77 195 aa16.15■□□□□ 0.18
TIMP1-205ENST00000456754 DIS3Q9Y2L1 958 aaKnown RBP16.15■□□□□ 0.18
TIMP1-205ENST00000456754 MYH7BA7E2Y1 1941 aa16.15■□□□□ 0.18
TIMP1-205ENST00000456754 ESYT2A0FGR8 921 aa16.14■□□□□ 0.17
TIMP1-205ENST00000456754 FAM205CA6NFA0 338 aa16.14■□□□□ 0.17
TIMP1-205ENST00000456754 GJB2P29033 226 aa16.14■□□□□ 0.17
TIMP1-205ENST00000456754 TRAF1Q13077 416 aa16.14■□□□□ 0.17
TIMP1-205ENST00000456754 ARHGEF16Q5VV41 709 aa16.14■□□□□ 0.17
TIMP1-205ENST00000456754 ANO1Q5XXA6 986 aa16.14■□□□□ 0.17
TIMP1-205ENST00000456754 MAMDC4Q6UXC1 1216 aa16.14■□□□□ 0.17
TIMP1-205ENST00000456754 HSCBQ8IWL3 235 aa16.14■□□□□ 0.17
TIMP1-205ENST00000456754 FBXO16Q8IX29 292 aaPredicted RBP16.14■□□□□ 0.17
TIMP1-205ENST00000456754 ZNF333Q96JL9 665 aa16.14■□□□□ 0.17
TIMP1-205ENST00000456754 PHF20Q9BVI0 1012 aa16.14■□□□□ 0.17
TIMP1-205ENST00000456754 PDGFCQ9NRA1 345 aa16.14■□□□□ 0.17
TIMP1-205ENST00000456754 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.14■□□□□ 0.17
TIMP1-205ENST00000456754 SLC5A4Q9NY91 659 aa16.14■□□□□ 0.17
TIMP1-205ENST00000456754 PCDHA6Q9UN73 950 aa16.14■□□□□ 0.17
TIMP1-205ENST00000456754 PCDHA8Q9Y5H6 950 aa16.14■□□□□ 0.17
TIMP1-205ENST00000456754 RPTORQ8N122 1335 aa16.14■□□□□ 0.17
TIMP1-205ENST00000456754 ADCY6O43306 1168 aa16.13■□□□□ 0.17
TIMP1-205ENST00000456754 MYCLP12524 364 aaPredicted RBP16.13■□□□□ 0.17
TIMP1-205ENST00000456754 CYBAP13498 195 aa16.13■□□□□ 0.17
TIMP1-205ENST00000456754 EDNRBP24530 442 aa16.13■□□□□ 0.17
TIMP1-205ENST00000456754 PGM5Q15124 567 aa16.13■□□□□ 0.17
TIMP1-205ENST00000456754 EARS2Q5JPH6 523 aaKnown RBP16.13■□□□□ 0.17
TIMP1-205ENST00000456754 MAP3K21Q5TCX8 1036 aa16.13■□□□□ 0.17
TIMP1-205ENST00000456754 KRT40Q6A162 431 aa16.13■□□□□ 0.17
TIMP1-205ENST00000456754 ZNF467Q7Z7K2 595 aaPredicted RBP16.13■□□□□ 0.17
TIMP1-205ENST00000456754 ARMC5Q96C12 935 aa16.13■□□□□ 0.17
TIMP1-205ENST00000456754 PDCD2LQ9BRP1 358 aa16.13■□□□□ 0.17
TIMP1-205ENST00000456754 C6orf50Q9HD87 102 aa16.13■□□□□ 0.17
TIMP1-205ENST00000456754 SH3GLB2Q9NR46 395 aa16.13■□□□□ 0.17
TIMP1-205ENST00000456754 KIAA1217Q5T5P2 1943 aa16.12■□□□□ 0.17
TIMP1-205ENST00000456754 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.12■□□□□ 0.17
TIMP1-205ENST00000456754 M0R2N6 131 aa16.12■□□□□ 0.17
TIMP1-205ENST00000456754 EDIL3O43854 480 aa16.12■□□□□ 0.17
TIMP1-205ENST00000456754 ZNF865P0CJ78 1059 aaPredicted RBP16.12■□□□□ 0.17
TIMP1-205ENST00000456754 MRPL12P52815 198 aaKnown RBP16.12■□□□□ 0.17
TIMP1-205ENST00000456754 MFSD14CQ5VZR4 134 aa16.12■□□□□ 0.17
TIMP1-205ENST00000456754 IL27Q8NEV9 243 aa16.12■□□□□ 0.17
TIMP1-205ENST00000456754 CCDC148Q8NFR7 591 aa16.12■□□□□ 0.17
TIMP1-205ENST00000456754 DNERQ8NFT8 737 aa16.12■□□□□ 0.17
TIMP1-205ENST00000456754 MORC4Q8TE76 937 aa16.12■□□□□ 0.17
TIMP1-205ENST00000456754 NSUN6Q8TEA1 469 aaKnown RBP16.12■□□□□ 0.17
TIMP1-205ENST00000456754 ANO3Q9BYT9 981 aa16.12■□□□□ 0.17
TIMP1-205ENST00000456754 ADD3Q9UEY8 706 aaKnown RBP16.12■□□□□ 0.17
TIMP1-205ENST00000456754 ZHX1Q9UKY1 873 aaPredicted RBP16.12■□□□□ 0.17
TIMP1-205ENST00000456754 PCDHA4Q9UN74 947 aa16.12■□□□□ 0.17
TIMP1-205ENST00000456754 SMC3Q9UQE7 1217 aa16.12■□□□□ 0.17
TIMP1-205ENST00000456754 FRMPD4Q14CM0 1322 aa16.12■□□□□ 0.17
TIMP1-205ENST00000456754 SYNGAP1Q96PV0 1343 aa16.12■□□□□ 0.17
TIMP1-205ENST00000456754 FRMPD3Q5JV73 1810 aa16.12■□□□□ 0.17
TIMP1-205ENST00000456754 NR3C2P08235 984 aa16.11■□□□□ 0.17
TIMP1-205ENST00000456754 CCL5P13501 91 aa16.11■□□□□ 0.17
TIMP1-205ENST00000456754 IRX5P78411 483 aaPredicted RBP16.11■□□□□ 0.17
TIMP1-205ENST00000456754 MRPS9P82933 396 aaKnown RBP16.11■□□□□ 0.17
TIMP1-205ENST00000456754 HMGN5P82970 282 aaKnown RBP16.11■□□□□ 0.17
TIMP1-205ENST00000456754 PDE4DQ08499 809 aa16.11■□□□□ 0.17
TIMP1-205ENST00000456754 NR5A1Q13285 461 aa16.11■□□□□ 0.17
TIMP1-205ENST00000456754 GJC2Q5T442 439 aaPredicted RBP16.11■□□□□ 0.17
TIMP1-205ENST00000456754 BLIDQ8IZY5 108 aa16.11■□□□□ 0.17
TIMP1-205ENST00000456754 REXO1Q8N1G1 1221 aaKnown RBP16.11■□□□□ 0.17
TIMP1-205ENST00000456754 FAM184AQ8NB25 1140 aa16.11■□□□□ 0.17
TIMP1-205ENST00000456754 CCDC12Q8WUD4 166 aaPredicted RBP16.11■□□□□ 0.17
TIMP1-205ENST00000456754 WASF1Q92558 559 aa16.11■□□□□ 0.17
TIMP1-205ENST00000456754 C8orf76Q96K31 380 aa16.11■□□□□ 0.17
TIMP1-205ENST00000456754 MAP3K20Q9NYL2 800 aaKnown RBP16.11■□□□□ 0.17
TIMP1-205ENST00000456754 RTEL1Q9NZ71 1219 aa16.11■□□□□ 0.17
TIMP1-205ENST00000456754 DOCK5Q9H7D0 1870 aa16.11■□□□□ 0.17
TIMP1-205ENST00000456754 BRCA2P51587 3418 aa16.1■□□□□ 0.17
TIMP1-205ENST00000456754 ASB14A6NK59 587 aa16.1■□□□□ 0.17
TIMP1-205ENST00000456754 SPDYE3A6NKU9 549 aa16.1■□□□□ 0.17
TIMP1-205ENST00000456754 BTBD18B2RXH4 712 aa16.1■□□□□ 0.17
TIMP1-205ENST00000456754 KIF28PB7ZC32 967 aa16.1■□□□□ 0.17
TIMP1-205ENST00000456754 RGS20O76081 388 aa16.1■□□□□ 0.17
TIMP1-205ENST00000456754 ARIH2O95376 493 aa16.1■□□□□ 0.17
TIMP1-205ENST00000456754 CNGA1P29973 690 aa16.1■□□□□ 0.17
TIMP1-205ENST00000456754 ADCYAP1R1P41586 468 aa16.1■□□□□ 0.17
TIMP1-205ENST00000456754 ACVR2BQ13705 512 aa16.1■□□□□ 0.17
TIMP1-205ENST00000456754 TAPT1Q6NXT6 567 aa16.1■□□□□ 0.17
TIMP1-205ENST00000456754 TRMT44Q8IYL2 757 aaKnown RBP16.1■□□□□ 0.17
TIMP1-205ENST00000456754 TNS4Q8IZW8 715 aa16.1■□□□□ 0.17
TIMP1-205ENST00000456754 SAMD3Q8N6K7 520 aa16.1■□□□□ 0.17
TIMP1-205ENST00000456754 DAGLBQ8NCG7 672 aa16.1■□□□□ 0.17
TIMP1-205ENST00000456754 ABHD8Q96I13 439 aa16.1■□□□□ 0.17
TIMP1-205ENST00000456754 UIMC1Q96RL1 719 aa16.1■□□□□ 0.17
TIMP1-205ENST00000456754 KIAA0100Q14667 2235 aaKnown RBP16.1■□□□□ 0.17
TIMP1-205ENST00000456754 MMP1P03956 469 aa16.09■□□□□ 0.17
TIMP1-205ENST00000456754 GNA11P29992 359 aa16.09■□□□□ 0.17
TIMP1-205ENST00000456754 SEPT14Q6ZU15 432 aa16.09■□□□□ 0.17
TIMP1-205ENST00000456754 VSIG10LQ86VR7 867 aa16.09■□□□□ 0.17
TIMP1-205ENST00000456754 MSL3Q8N5Y2 521 aaKnown RBP16.09■□□□□ 0.17
TIMP1-205ENST00000456754 CYP2W1Q8TAV3 490 aa16.09■□□□□ 0.17
TIMP1-205ENST00000456754 COPS5Q92905 334 aa16.09■□□□□ 0.17
TIMP1-205ENST00000456754 TNFRSF25Q93038 417 aa16.09■□□□□ 0.17
TIMP1-205ENST00000456754 MAF1Q9H063 256 aa16.09■□□□□ 0.17
TIMP1-205ENST00000456754 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.09■□□□□ 0.17
TIMP1-205ENST00000456754 BCAS3Q9H6U6 928 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms