RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 REXO2Q9Y3B8 237 aaKnown RBP20.54■□□□□ 0.88
SEMA3B-209ENST00000456560 NDUFA10O95299 355 aa20.53■□□□□ 0.88
SEMA3B-209ENST00000456560 FAM193AP78312 1265 aa20.53■□□□□ 0.88
SEMA3B-209ENST00000456560 NFIAQ12857 509 aa20.53■□□□□ 0.88
SEMA3B-209ENST00000456560 CENPPQ6IPU0 288 aa20.53■□□□□ 0.88
SEMA3B-209ENST00000456560 WDR59Q6PJI9 974 aa20.53■□□□□ 0.88
SEMA3B-209ENST00000456560 UNC13DQ70J99 1090 aa20.53■□□□□ 0.88
SEMA3B-209ENST00000456560 SLC35F6Q8N357 371 aa20.53■□□□□ 0.88
SEMA3B-209ENST00000456560 LARP4BQ92615 738 aaKnown RBP20.53■□□□□ 0.88
SEMA3B-209ENST00000456560 RABGGTAQ92696 567 aa20.53■□□□□ 0.88
SEMA3B-209ENST00000456560 CNOT6LQ96LI5 555 aaKnown RBP20.53■□□□□ 0.88
SEMA3B-209ENST00000456560 SEMA6BQ9H3T3 888 aa20.53■□□□□ 0.88
SEMA3B-209ENST00000456560 GOLGB1Q14789 3259 aaKnown RBP20.53■□□□□ 0.88
SEMA3B-209ENST00000456560 ZBTB5O15062 677 aa20.53■□□□□ 0.88
SEMA3B-209ENST00000456560 UBE2SQ16763 222 aa20.53■□□□□ 0.88
SEMA3B-209ENST00000456560 TMEM119Q4V9L6 283 aa20.53■□□□□ 0.88
SEMA3B-209ENST00000456560 ZSCAN29Q8IWY8 852 aaPredicted RBP20.53■□□□□ 0.88
SEMA3B-209ENST00000456560 ZFPM1Q8IX07 1006 aa20.53■□□□□ 0.88
SEMA3B-209ENST00000456560 RAD54LQ92698 747 aa20.53■□□□□ 0.88
SEMA3B-209ENST00000456560 HPS3Q969F9 1004 aa20.53■□□□□ 0.88
SEMA3B-209ENST00000456560 CCDC17Q96LX7 622 aa20.53■□□□□ 0.88
SEMA3B-209ENST00000456560 NUDT12Q9BQG2 462 aa20.53■□□□□ 0.88
SEMA3B-209ENST00000456560 RAB34Q9BZG1 259 aa20.53■□□□□ 0.88
SEMA3B-209ENST00000456560 EPC1Q9H2F5 836 aa20.53■□□□□ 0.88
SEMA3B-209ENST00000456560 MYH4Q9Y623 1939 aa20.52■□□□□ 0.88
SEMA3B-209ENST00000456560 COL11A2P13942 1736 aaPredicted RBP20.52■□□□□ 0.88
SEMA3B-209ENST00000456560 ERICH4A6NGS2 130 aa20.52■□□□□ 0.88
SEMA3B-209ENST00000456560 USP17L10C9JJH3 530 aa20.52■□□□□ 0.88
SEMA3B-209ENST00000456560 PNMA6AP0CW24 399 aaPredicted RBP20.52■□□□□ 0.88
SEMA3B-209ENST00000456560 PDE6BP35913 854 aa20.52■□□□□ 0.88
SEMA3B-209ENST00000456560 CRKP46108 304 aa20.52■□□□□ 0.88
SEMA3B-209ENST00000456560 TNNI2P48788 182 aa20.52■□□□□ 0.88
SEMA3B-209ENST00000456560 MIIPQ5JXC2 388 aa20.52■□□□□ 0.88
SEMA3B-209ENST00000456560 RETREG2Q8NC44 543 aa20.52■□□□□ 0.88
SEMA3B-209ENST00000456560 NUP58Q9BVL2 599 aa20.52■□□□□ 0.88
SEMA3B-209ENST00000456560 POTEMA6NI47 508 aa20.51■□□□□ 0.87
SEMA3B-209ENST00000456560 PES1O00541 588 aaKnown RBP20.51■□□□□ 0.87
SEMA3B-209ENST00000456560 SLC16A2P36021 539 aa20.51■□□□□ 0.87
SEMA3B-209ENST00000456560 MRPL12P52815 198 aaKnown RBP20.51■□□□□ 0.87
SEMA3B-209ENST00000456560 MEA1Q16626 185 aa20.51■□□□□ 0.87
SEMA3B-209ENST00000456560 TEX35Q5T0J7 233 aa20.51■□□□□ 0.87
SEMA3B-209ENST00000456560 TMCO3Q6UWJ1 677 aa20.51■□□□□ 0.87
SEMA3B-209ENST00000456560 SRGAP1Q7Z6B7 1085 aa20.51■□□□□ 0.87
SEMA3B-209ENST00000456560 FLAD1Q8NFF5 587 aa20.51■□□□□ 0.87
SEMA3B-209ENST00000456560 GOLGA1Q92805 767 aa20.51■□□□□ 0.87
SEMA3B-209ENST00000456560 HAS1Q92839 578 aa20.51■□□□□ 0.87
SEMA3B-209ENST00000456560 CUL5Q93034 780 aa20.51■□□□□ 0.87
SEMA3B-209ENST00000456560 ZDHHC15Q96MV8 337 aa20.51■□□□□ 0.87
SEMA3B-209ENST00000456560 MRIQ9BWK5 157 aa20.51■□□□□ 0.87
SEMA3B-209ENST00000456560 DNAJC18Q9H819 358 aa20.51■□□□□ 0.87
SEMA3B-209ENST00000456560 SLC39A2Q9NP94 309 aa20.51■□□□□ 0.87
SEMA3B-209ENST00000456560 ATF5Q9Y2D1 282 aaPredicted RBP20.51■□□□□ 0.87
SEMA3B-209ENST00000456560 CTAGE9A4FU28 777 aa20.51■□□□□ 0.87
SEMA3B-209ENST00000456560 SLURP2P0DP57 97 aa20.51■□□□□ 0.87
SEMA3B-209ENST00000456560 TBC1D8BQ0IIM8 1120 aa20.51■□□□□ 0.87
SEMA3B-209ENST00000456560 CCDC96Q2M329 555 aa20.51■□□□□ 0.87
SEMA3B-209ENST00000456560 KCTD1Q719H9 257 aa20.51■□□□□ 0.87
SEMA3B-209ENST00000456560 MASTLQ96GX5 879 aa20.51■□□□□ 0.87
SEMA3B-209ENST00000456560 CDK5RAP3Q96JB5 506 aa20.51■□□□□ 0.87
SEMA3B-209ENST00000456560 MPHOSPH10O00566 681 aaKnown RBP20.5■□□□□ 0.87
SEMA3B-209ENST00000456560 MMP10P09238 476 aa20.5■□□□□ 0.87
SEMA3B-209ENST00000456560 KRT79Q5XKE5 535 aa20.5■□□□□ 0.87
SEMA3B-209ENST00000456560 MKL1Q969V6 931 aa20.5■□□□□ 0.87
SEMA3B-209ENST00000456560 ERGIC2Q96RQ1 377 aa20.5■□□□□ 0.87
SEMA3B-209ENST00000456560 SIPA1L1O43166 1804 aa20.5■□□□□ 0.87
SEMA3B-209ENST00000456560 HOXA7P31268 230 aaPredicted RBP20.5■□□□□ 0.87
SEMA3B-209ENST00000456560 MTIF2P46199 727 aaKnown RBP20.5■□□□□ 0.87
SEMA3B-209ENST00000456560 EHHADHQ08426 723 aa20.5■□□□□ 0.87
SEMA3B-209ENST00000456560 KIF4BQ2VIQ3 1234 aa20.5■□□□□ 0.87
SEMA3B-209ENST00000456560 KCNK18Q7Z418 384 aa20.5■□□□□ 0.87
SEMA3B-209ENST00000456560 PODNQ7Z5L7 613 aa20.5■□□□□ 0.87
SEMA3B-209ENST00000456560 SNX29Q8TEQ0 813 aa20.5■□□□□ 0.87
SEMA3B-209ENST00000456560 EEF2KMTQ96G04 330 aa20.5■□□□□ 0.87
SEMA3B-209ENST00000456560 KCNQ5Q9NR82 932 aa20.5■□□□□ 0.87
SEMA3B-209ENST00000456560 DDX25Q9UHL0 483 aaKnown RBP20.5■□□□□ 0.87
SEMA3B-209ENST00000456560 G3V3G9 751 aa20.49■□□□□ 0.87
SEMA3B-209ENST00000456560 ATP2B2Q01814 1243 aa20.49■□□□□ 0.87
SEMA3B-209ENST00000456560 DCAF8Q5TAQ9 597 aa20.49■□□□□ 0.87
SEMA3B-209ENST00000456560 GUF1Q8N442 669 aaKnown RBP20.49■□□□□ 0.87
SEMA3B-209ENST00000456560 CEP112Q8N8E3 955 aa20.49■□□□□ 0.87
SEMA3B-209ENST00000456560 NAPGQ99747 312 aaPredicted RBP20.49■□□□□ 0.87
SEMA3B-209ENST00000456560 NOC4LQ9BVI4 516 aaKnown RBP20.49■□□□□ 0.87
SEMA3B-209ENST00000456560 PSTPIP2Q9H939 334 aa20.49■□□□□ 0.87
SEMA3B-209ENST00000456560 MYH7BA7E2Y1 1941 aa20.49■□□□□ 0.87
SEMA3B-209ENST00000456560 NKRFO15226 690 aaKnown RBP eCLIP20.49■□□□□ 0.87
SEMA3B-209ENST00000456560 GCFC2P16383 781 aaKnown RBP20.49■□□□□ 0.87
SEMA3B-209ENST00000456560 PLA2G4AP47712 749 aa20.49■□□□□ 0.87
SEMA3B-209ENST00000456560 KLK7P49862 253 aa20.49■□□□□ 0.87
SEMA3B-209ENST00000456560 ZBED6P86452 979 aa20.49■□□□□ 0.87
SEMA3B-209ENST00000456560 TSR1Q2NL82 804 aaKnown RBP20.49■□□□□ 0.87
SEMA3B-209ENST00000456560 FIGNQ5HY92 759 aa20.49■□□□□ 0.87
SEMA3B-209ENST00000456560 PARD6BQ9BYG5 372 aa20.49■□□□□ 0.87
SEMA3B-209ENST00000456560 LRRC27Q9C0I9 530 aa20.49■□□□□ 0.87
SEMA3B-209ENST00000456560 AGPAT5Q9NUQ2 364 aa20.49■□□□□ 0.87
SEMA3B-209ENST00000456560 ATP8B1O43520 1251 aa20.48■□□□□ 0.87
SEMA3B-209ENST00000456560 CHMP4BP1P59074 171 aa20.48■□□□□ 0.87
SEMA3B-209ENST00000456560 HERVK_113P62684 666 aa20.48■□□□□ 0.87
SEMA3B-209ENST00000456560 ECM1Q16610 540 aa20.48■□□□□ 0.87
SEMA3B-209ENST00000456560 ZNF662Q6ZS27 426 aa20.48■□□□□ 0.87
SEMA3B-209ENST00000456560 DYMQ7RTS9 669 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms